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Obsolete: A35

A35 was replaced with A40 on
Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1C2doub1.33Å1.35ÅAromatic
N1C6sing1.33Å1.37ÅAromatic
C2N2sing1.39Å1.35Å
C2N3sing1.32Å1.35ÅAromatic
C4C5sing1.40Å1.35ÅAromatic
C4N3doub1.33Å1.35ÅAromatic
C4N9sing1.37Å1.38ÅAromatic
C5C6doub1.41Å1.43ÅAromatic
C5N7sing1.36Å1.39ÅAromatic
C6N6sing1.38Å1.32Å
C8N9sing1.36Å1.37ÅAromatic
C8N7doub1.30Å1.33ÅAromatic
C8H8sing1.08Å1.10Å
N2CH2sing1.46Å1.47Å
N2H2sing0.97Å1.02Å
N9C1'sing1.46Å1.47Å
N6H6N1sing0.97Å1.02Å
N6H6N2sing0.97Å1.02Å
PO1Pdoub1.48Å1.43Å
PO2Psing1.61Å1.59Å
PO5'sing1.61Å1.60Å
PO3Psing1.61Å1.53Å
O2PH2Psing0.97Å0.95Å
O5'C5'sing1.43Å1.41Å
C5'C4'sing1.53Å1.50Å
C5'H5'1sing1.09Å1.11Å
C5'H5'2sing1.09Å1.11Å
C4'O4'sing1.45Å1.40Å
C4'C3'sing1.55Å1.55Å
C4'H4'sing1.09Å1.12Å
O4'C1'sing1.44Å1.47Å
C1'C2'sing1.54Å1.48Å
C1'H1'sing1.09Å1.11Å
C2'C3'sing1.55Å1.50Å
C2'H2'1sing1.09Å1.12Å
C2'H2'2sing1.09Å1.11Å
C3'O3'sing1.43Å1.43Å
C3'H3'sing1.09Å1.11Å
O3'HAsing0.97Å0.95Å
O3PH3Psing0.97Å0.95Å
CH2HH21sing1.09Å1.11Å
CH2HH22sing1.09Å1.12Å
CH2HH23sing1.09Å1.12Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2N1C6121.8°121.2°
N1C2N2115.5°118.9°
N1C2N3128.8°122.2°
N1C6C5113.0°118.5°
N1C6N6122.1°120.8°
N2C2N3115.7°118.9°
C2N2CH2110.5°120.0°
C2N2H2124.7°120.0°
C2N3C4107.9°120.6°
C5C4N3129.6°119.2°
C5C4N9106.6°106.0°
C4C5C6118.8°118.3°
C4C5N7110.8°107.2°
N3C4N9123.7°134.8°
C4N9C8106.3°107.4°
C4N9C1'123.5°126.3°
C6C5N7130.3°134.6°
C5C6N6124.9°120.7°
C5N7C8103.9°109.4°
C6N6H6N1122.1°120.0°
C6N6H6N2124.9°120.0°
N9C8N7112.2°110.0°
N9C8H8123.9°125.0°
C8N9C1'130.1°126.3°
N7C8H8123.9°125.0°
CH2N2H2124.7°120.0°
N2CH2HH21110.5°109.5°
N2CH2HH22111.8°109.4°
N2CH2HH23111.8°109.5°
N9C1'O4'107.8°109.9°
N9C1'C2'113.7°109.9°
N9C1'H1'109.6°109.8°
H6N1N6H6N2113.0°120.1°
O1PPO2P107.9°109.5°
O1PPO5'111.8°109.5°
O1PPO3P122.2°109.4°
O2PPO5'107.1°109.5°
O2PPO3P105.1°109.4°
PO2PH2P107.9°106.8°
O5'PO3P101.8°109.5°
PO5'C5'121.9°106.8°
PO3PH3P122.2°106.8°
O5'C5'C4'108.4°109.5°
O5'C5'H5'1112.6°109.4°
O5'C5'H5'2112.6°109.5°
C4'C5'H5'1112.6°109.4°
C4'C5'H5'2112.6°109.5°
C5'C4'O4'114.6°110.8°
C5'C4'C3'114.1°110.6°
C5'C4'H4'107.5°110.6°
H5'1C5'H5'297.8°109.5°
O4'C4'C3'105.4°103.6°
O4'C4'H4'107.5°110.5°
C4'O4'C1'109.4°106.8°
C3'C4'H4'107.5°110.6°
C4'C3'C2'103.2°102.1°
C4'C3'O3'105.5°110.9°
C4'C3'H3'110.7°110.9°
O4'C1'C2'106.5°107.5°
O4'C1'H1'109.6°109.9°
C2'C1'H1'109.6°109.9°
C1'C2'C3'101.7°104.2°
C1'C2'H2'1115.2°110.5°
C1'C2'H2'2115.2°110.5°
C3'C2'H2'1115.2°110.5°
C3'C2'H2'2115.1°110.5°
C2'C3'O3'115.7°110.9°
C2'C3'H3'110.7°110.9°
H2'1C2'H2'295.3°110.5°
O3'C3'H3'110.7°110.8°
C3'O3'HA115.7°106.8°
HH21CH2HH22111.8°109.5°
HH21CH2HH23111.8°109.5°
HH22CH2HH2398.6°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N1C2N2N3179.5°179.7°
N1C2N3C42.1°0.6°
C2N1C6C51.0°0.0°
C2N1C6N6179.0°180.0°
N1C2N2CH2176.4°0.0°
N1C2N2H23.7°179.9°
C6N1C2N2178.2°180.0°
C6N1C2N31.3°0.3°
N1C6C5C41.9°0.0°
N1C6C5N6179.9°179.9°
N1C6C5N7179.2°180.0°
N1C6N6H6N1180.0°0.0°
N1C6N6H6N20.1°180.0°
N2C2N3C4177.3°179.7°
C2N2CH2H2180.0°179.9°
C2N2CH2HH21180.0°60.0°
C2N2CH2HH2254.7°179.9°
C2N2CH2HH2354.7°60.0°
C2N3C4C50.9°0.6°
C2N3C4N9179.2°179.7°
N3C2N2CH24.1°179.7°
N3C2N2H2175.9°0.2°
C5C4N3N9179.9°179.7°
C4C5C6N7177.3°179.9°
C4C5C6N6178.0°180.0°
C5C4N9C81.1°0.0°
C4C5N7C80.7°0.0°
C5C4N9C1'176.7°180.0°
N3C4C5C61.1°0.3°
N3C4C5N7178.8°179.8°
N3C4N9C8178.9°179.7°
N3C4N9C1'3.4°0.3°
N9C4C5C6178.9°179.9°
N9C4C5N71.1°0.0°
C4N9C8C1'177.5°180.0°
C4N9C8N70.7°0.0°
C4N9C8H8179.3°180.0°
C4N9C1'O4'99.7°156.7°
C4N9C1'C2'142.5°85.3°
C4N9C1'H1'19.5°35.7°
C6C5N7C8178.1°179.9°
C5C6N6H6N10.1°179.9°
C5C6N6H6N2180.0°0.1°
N7C5C6N60.7°0.1°
C5N7C8N90.0°0.0°
C5N7C8H8180.0°180.0°
C6N6H6N1H6N2179.9°180.0°
N9C8N7H8180.0°180.0°
C8N9C1'O4'77.4°23.3°
C8N9C1'C2'40.3°94.7°
C8N9C1'H1'163.4°144.3°
N7C8N9C1'176.9°180.0°
H8C8N9C1'3.1°0.0°
N2CH2HH21HH22125.3°120.0°
N2CH2HH21HH23125.3°120.0°
N2CH2HH22HH23117.7°119.9°
H2N2CH2HH210.0°120.1°
H2N2CH2HH22125.2°0.0°
H2N2CH2HH23125.3°119.9°
N9C1'O4'C4'138.9°145.8°
N9C1'O4'C2'122.4°119.5°
N9C1'O4'H1'119.2°120.9°
N9C1'C2'H1'123.0°121.0°
N9C1'C2'C3'151.6°121.4°
N9C1'C2'H2'126.3°119.9°
N9C1'C2'H2'283.2°2.8°
O1PPO2PO5'120.5°120.1°
O1PPO2PO3P131.8°120.0°
O1PPO5'O3P131.9°120.0°
O1PPO2PH2P180.0°180.0°
O1PPO5'C5'174.7°55.1°
O1PPO3PH3P180.0°60.0°
O2PPO5'O3P110.0°120.0°
O2PPO5'C5'67.2°65.0°
O2PPO3PH3P56.9°60.0°
O5'PO2PH2P59.5°59.9°
PO5'C5'C4'167.9°180.0°
PO5'C5'H5'166.8°60.1°
PO5'C5'H5'242.6°60.0°
O5'PO3PH3P54.7°180.0°
O3PPO2PH2P48.2°60.0°
O3PPO5'C5'42.8°175.0°
O5'C5'C4'H5'1125.3°119.9°
O5'C5'C4'H5'2125.3°120.1°
O5'C5'H5'1H5'2118.5°120.0°
O5'C5'C4'O4'77.5°70.7°
O5'C5'C4'C3'44.1°175.0°
O5'C5'C4'H4'163.1°52.1°
C4'C5'H5'1H5'2118.5°120.0°
C5'C4'O4'C3'126.2°118.7°
C5'C4'O4'H4'119.3°122.8°
C5'C4'C3'H4'119.0°122.9°
C5'C4'O4'C1'119.3°158.5°
C5'C4'C3'C2'99.2°155.7°
C5'C4'C3'O3'139.0°86.1°
C5'C4'C3'H3'19.2°37.5°
H5'1C5'C4'O4'47.7°169.4°
H5'1C5'C4'C3'169.4°55.0°
H5'1C5'C4'H4'71.6°67.9°
H5'2C5'C4'O4'157.2°49.3°
H5'2C5'C4'C3'81.2°65.0°
H5'2C5'C4'H4'37.9°172.1°
O4'C4'C3'H4'114.4°118.4°
C4'O4'C1'C2'16.5°26.3°
C4'O4'C1'H1'101.9°93.2°
O4'C4'C3'C2'27.3°36.9°
O4'C4'C3'O3'94.5°155.2°
O4'C4'C3'H3'145.8°81.2°
C3'C4'O4'C1'6.9°39.8°
C4'C3'C2'C1'36.2°20.9°
C4'C3'C2'O3'114.6°118.2°
C4'C3'C2'H3'118.4°118.2°
C4'C3'C2'H2'189.1°97.8°
C4'C3'C2'H2'2161.5°139.6°
C4'C3'O3'H3'119.7°123.7°
C4'C3'O3'HA66.7°174.1°
H4'C4'O4'C1'121.3°78.7°
H4'C4'C3'C2'141.8°81.4°
H4'C4'C3'O3'20.0°36.8°
H4'C4'C3'H3'99.8°160.4°
O4'C1'C2'H1'118.4°119.5°
O4'C1'C2'C3'33.0°1.9°
O4'C1'C2'H2'192.3°120.6°
O4'C1'C2'H2'2158.3°116.7°
C1'C2'C3'H2'1125.3°118.7°
C1'C2'C3'H2'2125.3°118.7°
C1'C2'H2'1H2'2121.0°122.6°
C1'C2'C3'O3'78.4°139.1°
C1'C2'C3'H3'154.7°97.3°
H1'C1'C2'C3'85.4°117.6°
H1'C1'C2'H2'1149.3°1.1°
H1'C1'C2'H2'239.8°123.8°
C3'C2'H2'1H2'2121.0°122.6°
C2'C3'O3'H3'126.9°123.6°
C2'C3'O3'HA180.0°61.4°
H2'1C2'C3'O3'156.3°20.4°
H2'1C2'C3'H3'29.4°144.0°
H2'2C2'C3'O3'46.8°102.2°
H2'2C2'C3'H3'80.1°21.4°
H3'C3'O3'HA53.1°62.2°
HH21CH2HH22HH23117.7°120.0°

224931

PDB entries from 2024-09-11

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