A32

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C1	O1	sing	1.43Å	1.47Å
C1	C2	sing	1.53Å	1.56Å
C1	O5	sing	1.43Å	1.44Å
C1	H11	sing	1.09Å	1.10Å
O1	C1'	sing	1.36Å	1.45Å
C2	O2	sing	1.43Å	1.43Å
C2	C3	sing	1.53Å	1.54Å
C2	H21	sing	1.09Å	1.10Å
O2	HO21	sing	0.97Å	0.95Å
C3	O3	sing	1.43Å	1.42Å
C3	C4	sing	1.53Å	1.57Å
C3	H31	sing	1.09Å	1.10Å
O3	HO31	sing	0.97Å	0.95Å
C4	O4	sing	1.43Å	1.41Å
C4	C5	sing	1.53Å	1.54Å
C4	H41	sing	1.09Å	1.10Å
O4	HO41	sing	0.97Å	0.95Å
C5	O5	sing	1.43Å	1.45Å
C5	C6	sing	1.53Å	1.54Å
C5	H51	sing	1.09Å	1.10Å
C6	O6	sing	1.43Å	1.41Å
C6	H61	sing	1.09Å	1.10Å
C6	H62	sing	1.09Å	1.10Å
O6	HO1	sing	0.97Å	0.95Å
C1'	C2'	doub	1.39Å	1.39Å	Aromatic
C1'	C6'	sing	1.39Å	1.39Å	Aromatic
C2'	C3'	sing	1.38Å	1.41Å	Aromatic
C2'	H2'1	sing	1.08Å	1.08Å
C3'	C4'	doub	1.38Å	1.43Å	Aromatic
C3'	N1'	sing	1.48Å	1.41Å
C4'	C5'	sing	1.40Å	1.41Å	Aromatic
C4'	H4'1	sing	1.08Å	1.08Å
C5'	C6'	doub	1.39Å	1.43Å	Aromatic
C5'	C7'	sing	1.48Å	1.42Å
C6'	H6'1	sing	1.08Å	1.08Å
N1'	O1'	sing	1.22Å	1.28Å
N1'	O2'	doub	1.22Å	1.25Å
C7'	O3'	doub	1.21Å	1.29Å
C7'	N2'	sing	1.35Å	1.24Å
N2'	C9'	sing	1.46Å	1.42Å
N2'	HN21	sing	0.97Å	1.00Å
O1B	C2B	sing	1.43Å	1.40Å
O1B	C6B	sing	1.43Å	1.43Å
C2B	C3B	sing	1.53Å	1.51Å
C2B	H2A1	sing	1.09Å	1.10Å
C2B	H2'2	sing	1.09Å	1.10Å
C3B	N4'	sing	1.47Å	1.50Å
C3B	H3'1	sing	1.09Å	1.10Å
C3B	H3'2	sing	1.09Å	1.10Å
N4'	C5B	sing	1.47Å	1.50Å
N4'	C7B	sing	1.47Å	1.50Å
C5B	C6B	sing	1.53Å	1.53Å
C5B	H5'1	sing	1.09Å	1.10Å
C5B	H5'2	sing	1.09Å	1.10Å
C6B	H6A1	sing	1.09Å	1.10Å
C6B	H6'2	sing	1.09Å	1.10Å
C7B	C8'	sing	1.53Å	1.52Å
C7B	H7'1	sing	1.09Å	1.10Å
C7B	H7'2	sing	1.09Å	1.10Å
C8'	C9'	sing	1.53Å	1.56Å
C8'	H8'1	sing	1.09Å	1.10Å
C8'	H8'2	sing	1.09Å	1.10Å
C9'	H9'1	sing	1.09Å	1.10Å
C9'	H9'2	sing	1.09Å	1.10Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O1	C1	C2	116.3°	109.4°
O1	C1	O5	107.1°	109.4°
O1	C1	H11	106.2°	109.4°
C1	O1	C1'	112.0°	106.8°
C2	C1	O5	108.3°	109.8°
C2	C1	H11	104.9°	109.4°
C1	C2	O2	115.1°	109.5°
C1	C2	C3	108.3°	109.0°
C1	C2	H21	106.1°	109.6°
O5	C1	H11	114.4°	109.4°
C1	O5	C5	111.6°	107.6°
O1	C1'	C2'	120.5°	120.0°
O1	C1'	C6'	112.2°	119.9°
O2	C2	C3	108.6°	109.6°
O2	C2	H21	105.8°	109.6°
C2	O2	HO21	109.5°	106.8°
C3	C2	H21	113.0°	109.5°
C2	C3	O3	106.3°	109.6°
C2	C3	C4	105.3°	108.6°
C2	C3	H31	112.9°	109.6°
O3	C3	C4	105.7°	109.7°
O3	C3	H31	112.5°	109.5°
C3	O3	HO31	109.5°	106.8°
C4	C3	H31	113.4°	109.7°
C3	C4	O4	110.7°	109.5°
C3	C4	C5	112.4°	109.0°
C3	C4	H41	108.1°	109.5°
O4	C4	C5	113.6°	109.7°
O4	C4	H41	106.8°	109.5°
C4	O4	HO41	109.5°	106.8°
C5	C4	H41	104.8°	109.5°
C4	C5	O5	109.6°	109.7°
C4	C5	C6	115.1°	109.4°
C4	C5	H51	105.5°	109.4°
O5	C5	C6	109.5°	109.4°
O5	C5	H51	111.5°	109.5°
C6	C5	H51	105.6°	109.4°
C5	C6	O6	112.0°	109.4°
C5	C6	H61	108.0°	109.5°
C5	C6	H62	108.7°	109.5°
O6	C6	H61	108.1°	109.5°
O6	C6	H62	108.6°	109.5°
C6	O6	HO1	109.5°	106.8°
H61	C6	H62	111.5°	109.4°
C2'	C1'	C6'	127.2°	120.1°
C1'	C2'	C3'	117.9°	120.2°
C1'	C2'	H2'1	121.0°	119.9°
C1'	C6'	C5'	115.9°	119.7°
C1'	C6'	H6'1	122.1°	120.1°
C3'	C2'	H2'1	121.0°	119.9°
C2'	C3'	C4'	116.2°	120.2°
C2'	C3'	N1'	126.7°	119.9°
C4'	C3'	N1'	117.0°	119.9°
C3'	C4'	C5'	124.7°	120.0°
C3'	C4'	H4'1	117.6°	120.0°
C3'	N1'	O1'	114.6°	120.0°
C3'	N1'	O2'	123.5°	120.0°
C5'	C4'	H4'1	117.7°	120.0°
C4'	C5'	C6'	118.0°	119.8°
C4'	C5'	C7'	127.5°	120.1°
C6'	C5'	C7'	114.5°	120.1°
C5'	C6'	H6'1	122.1°	120.1°
C5'	C7'	O3'	112.0°	120.0°
C5'	C7'	N2'	124.4°	120.0°
O1'	N1'	O2'	121.8°	120.0°
O3'	C7'	N2'	123.4°	120.0°
C7'	N2'	C9'	133.8°	120.0°
C7'	N2'	HN21	113.1°	119.9°
C9'	N2'	HN21	113.1°	120.0°
N2'	C9'	C8'	110.2°	109.4°
N2'	C9'	H9'1	109.0°	109.5°
N2'	C9'	H9'2	109.2°	109.5°
C2B	O1B	C6B	117.3°	107.2°
O1B	C2B	C3B	121.7°	109.7°
O1B	C2B	H2A1	102.7°	109.4°
O1B	C2B	H2'2	105.6°	109.4°
O1B	C6B	C5B	112.9°	109.7°
O1B	C6B	H6A1	107.6°	109.4°
O1B	C6B	H6'2	108.3°	109.4°
C3B	C2B	H2A1	102.8°	109.5°
C3B	C2B	H2'2	105.6°	109.5°
C2B	C3B	N4'	119.5°	109.5°
C2B	C3B	H3'1	104.0°	109.5°
C2B	C3B	H3'2	106.3°	109.4°
H2A1	C2B	H2'2	119.6°	109.4°
N4'	C3B	H3'1	103.9°	109.5°
N4'	C3B	H3'2	106.3°	109.4°
C3B	N4'	C5B	111.9°	106.6°
C3B	N4'	C7B	118.2°	106.7°
H3'1	C3B	H3'2	117.7°	109.5°
C5B	N4'	C7B	113.2°	106.7°
N4'	C5B	C6B	115.1°	109.5°
N4'	C5B	H5'1	106.4°	109.4°
N4'	C5B	H5'2	107.7°	109.5°
N4'	C7B	C8'	118.9°	109.4°
N4'	C7B	H7'1	104.2°	109.5°
N4'	C7B	H7'2	106.4°	109.5°
C6B	C5B	H5'1	106.4°	109.5°
C6B	C5B	H5'2	107.7°	109.5°
C5B	C6B	H6A1	107.6°	109.4°
C5B	C6B	H6'2	108.4°	109.4°
H5'1	C5B	H5'2	113.9°	109.5°
H6A1	C6B	H6'2	112.2°	109.4°
C8'	C7B	H7'1	104.2°	109.5°
C8'	C7B	H7'2	106.5°	109.5°
C7B	C8'	C9'	106.4°	109.4°
C7B	C8'	H8'1	111.2°	109.4°
C7B	C8'	H8'2	110.5°	109.5°
H7'1	C7B	H7'2	117.2°	109.5°
C9'	C8'	H8'1	111.2°	109.5°
C9'	C8'	H8'2	110.5°	109.5°
C8'	C9'	H9'1	109.1°	109.5°
C8'	C9'	H9'2	109.2°	109.5°
H8'1	C8'	H8'2	107.1°	109.5°
H9'1	C9'	H9'2	110.1°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O1	C1	C2	O5	120.5°	120.1°
O1	C1	C2	H11	116.9°	119.8°
O1	C1	O5	H11	117.3°	119.9°
O1	C1	C2	O2	67.2°	61.1°
O1	C1	C2	C3	54.6°	58.8°
O1	C1	C2	H21	176.1°	178.7°
O1	C1	O5	C5	60.5°	52.4°
C1	O1	C1'	C2'	71.6°	174.6°
C1	O1	C1'	C6'	108.7°	5.7°
C2	C1	O5	H11	116.5°	120.1°
C2	C1	O1	C1'	160.2°	174.0°
C1	C2	O2	C3	121.6°	119.6°
C1	C2	O2	H21	116.8°	120.2°
C1	C2	C3	H21	117.2°	119.9°
C1	C2	O2	HO21	39.0°	60.0°
C1	C2	C3	O3	171.2°	173.7°
C1	C2	C3	C4	59.3°	53.8°
C1	C2	C3	H31	65.0°	66.1°
C2	C1	O5	C5	65.6°	67.6°
O5	C1	O1	C1'	78.6°	65.7°
O5	C1	C2	O2	172.2°	178.8°
O5	C1	C2	C3	66.0°	61.2°
O5	C1	C2	H21	55.6°	58.6°
C1	O5	C5	C4	60.0°	67.6°
C1	O5	C5	C6	172.9°	172.3°
C1	O5	C5	H51	56.4°	52.4°
H11	C1	O1	C1'	44.1°	54.1°
H11	C1	C2	O2	49.7°	58.7°
H11	C1	C2	C3	171.5°	178.7°
H11	C1	C2	H21	67.0°	61.5°
H11	C1	O5	C5	177.9°	172.3°
O1	C1'	C2'	C6'	179.6°	179.7°
O1	C1'	C2'	C3'	179.9°	179.7°
O1	C1'	C2'	H2'1	0.1°	0.3°
O1	C1'	C6'	C5'	179.6°	180.0°
O1	C1'	C6'	H6'1	0.4°	0.1°
O2	C2	C3	H21	117.1°	120.2°
O2	C2	C3	O3	63.1°	66.5°
O2	C2	C3	C4	175.0°	173.6°
O2	C2	C3	H31	60.8°	53.8°
C3	C2	O2	HO21	160.7°	179.6°
C2	C3	O3	C4	111.6°	119.2°
C2	C3	O3	H31	124.1°	120.4°
C2	C3	C4	H31	124.0°	119.8°
C2	C3	O3	HO31	155.8°	60.0°
C2	C3	C4	O4	72.6°	66.2°
C2	C3	C4	C5	55.6°	53.8°
C2	C3	C4	H41	170.8°	173.6°
H21	C2	O2	HO21	77.8°	60.2°
H21	C2	C3	O3	54.0°	53.8°
H21	C2	C3	C4	57.9°	66.1°
H21	C2	C3	H31	177.8°	174.1°
O3	C3	C4	H31	123.8°	120.4°
O3	C3	C4	O4	39.7°	53.6°
O3	C3	C4	C5	167.9°	173.7°
O3	C3	C4	H41	76.9°	66.6°
C4	C3	O3	HO31	92.6°	179.2°
C3	C4	O4	C5	127.5°	119.6°
C3	C4	O4	H41	117.4°	120.2°
C3	C4	C5	H41	117.2°	119.8°
C3	C4	O4	HO41	91.2°	60.1°
C3	C4	C5	O5	55.5°	61.4°
C3	C4	C5	C6	179.5°	178.6°
C3	C4	C5	H51	64.6°	58.7°
H31	C3	O3	HO31	31.7°	60.4°
H31	C3	C4	O4	163.5°	174.0°
H31	C3	C4	C5	68.3°	66.0°
H31	C3	C4	H41	46.9°	53.8°
O4	C4	C5	H41	116.2°	120.2°
O4	C4	C5	O5	71.1°	58.6°
O4	C4	C5	C6	52.8°	61.5°
O4	C4	C5	H51	168.7°	178.7°
C5	C4	O4	HO41	141.2°	179.7°
C4	C5	O5	C6	127.2°	120.0°
C4	C5	O5	H51	116.4°	120.1°
C4	C5	C6	H51	115.8°	119.9°
C4	C5	C6	O6	167.5°	174.9°
C4	C5	C6	H61	73.6°	65.1°
C4	C5	C6	H62	47.5°	54.9°
H41	C4	O4	HO41	26.2°	60.1°
H41	C4	C5	O5	172.7°	178.8°
H41	C4	C5	C6	63.4°	58.8°
H41	C4	C5	H51	52.6°	61.1°
O5	C5	C6	H51	120.1°	119.9°
O5	C5	C6	O6	68.5°	64.9°
O5	C5	C6	H61	50.4°	55.1°
O5	C5	C6	H62	171.5°	175.1°
C5	C6	O6	H61	118.9°	120.0°
C5	C6	O6	H62	120.0°	120.0°
C5	C6	H61	H62	119.3°	120.0°
C5	C6	O6	HO1	93.7°	180.0°
H51	C5	C6	O6	51.6°	55.0°
H51	C5	C6	H61	170.5°	175.0°
H51	C5	C6	H62	68.4°	65.0°
O6	C6	H61	H62	119.3°	120.0°
H61	C6	O6	HO1	25.2°	59.9°
H62	C6	O6	HO1	146.3°	60.0°
C1'	C2'	C3'	H2'1	180.0°	179.5°
C1'	C2'	C3'	C4'	0.7°	0.5°
C1'	C2'	C3'	N1'	178.6°	179.7°
C2'	C1'	C6'	C5'	0.1°	0.3°
C2'	C1'	C6'	H6'1	179.9°	179.8°
C6'	C1'	C2'	C3'	0.3°	0.6°
C6'	C1'	C2'	H2'1	179.7°	180.0°
C1'	C6'	C5'	C4'	0.1°	0.0°
C1'	C6'	C5'	H6'1	180.0°	179.9°
C1'	C6'	C5'	C7'	179.0°	180.0°
C2'	C3'	C4'	N1'	178.1°	179.8°
C2'	C3'	C4'	C5'	0.9°	0.2°
C2'	C3'	C4'	H4'1	179.0°	179.7°
C2'	C3'	N1'	O1'	177.2°	179.7°
C2'	C3'	N1'	O2'	6.1°	0.2°
H2'1	C2'	C3'	C4'	179.3°	180.0°
H2'1	C2'	C3'	N1'	1.4°	0.2°
C3'	C4'	C5'	H4'1	180.0°	180.0°
C3'	C4'	C5'	C6'	0.6°	0.0°
C3'	C4'	C5'	C7'	178.4°	180.0°
C4'	C3'	N1'	O1'	5.0°	0.1°
C4'	C3'	N1'	O2'	171.8°	180.0°
N1'	C3'	C4'	C5'	179.0°	180.0°
N1'	C3'	C4'	H4'1	1.0°	0.0°
C3'	N1'	O1'	O2'	176.8°	179.9°
C4'	C5'	C6'	C7'	179.1°	180.0°
C4'	C5'	C6'	H6'1	179.9°	180.0°
C4'	C5'	C7'	O3'	166.5°	179.9°
C4'	C5'	C7'	N2'	16.8°	0.0°
H4'1	C4'	C5'	C6'	179.4°	180.0°
H4'1	C4'	C5'	C7'	1.7°	0.0°
C6'	C5'	C7'	O3'	14.5°	0.1°
C6'	C5'	C7'	N2'	162.2°	180.0°
C7'	C5'	C6'	H6'1	1.0°	0.1°
C5'	C7'	O3'	N2'	176.7°	179.9°
C5'	C7'	N2'	C9'	6.0°	179.9°
C5'	C7'	N2'	HN21	174.1°	0.0°
O3'	C7'	N2'	C9'	170.3°	0.0°
O3'	C7'	N2'	HN21	9.6°	179.9°
C7'	N2'	C9'	HN21	180.0°	179.9°
C7'	N2'	C9'	C8'	109.9°	180.0°
C7'	N2'	C9'	H9'1	9.8°	60.0°
C7'	N2'	C9'	H9'2	130.1°	60.0°
N2'	C9'	C8'	C7B	9.2°	180.0°
N2'	C9'	C8'	H9'1	119.7°	120.0°
N2'	C9'	C8'	H9'2	120.0°	120.0°
N2'	C9'	C8'	H8'1	130.4°	60.0°
N2'	C9'	C8'	H8'2	110.9°	60.1°
N2'	C9'	H9'1	H9'2	119.8°	120.0°
HN21	N2'	C9'	C8'	70.2°	0.1°
HN21	N2'	C9'	H9'1	170.2°	119.9°
HN21	N2'	C9'	H9'2	49.8°	120.1°
O1B	C2B	C3B	H2A1	113.9°	120.1°
O1B	C2B	C3B	H2'2	120.0°	120.0°
O1B	C2B	H2A1	H2'2	116.4°	119.8°
O1B	C2B	C3B	N4'	13.6°	62.9°
O1B	C2B	C3B	H3'1	128.8°	57.2°
O1B	C2B	C3B	H3'2	106.4°	177.1°
C2B	O1B	C6B	C5B	37.6°	63.1°
C2B	O1B	C6B	H6A1	80.9°	176.8°
C2B	O1B	C6B	H6'2	157.6°	57.0°
C6B	O1B	C2B	C3B	4.2°	63.1°
C6B	O1B	C2B	H2A1	118.1°	176.8°
C6B	O1B	C2B	H2'2	115.8°	57.0°
O1B	C6B	C5B	N4'	56.4°	62.9°
O1B	C6B	C5B	H6A1	118.5°	120.1°
O1B	C6B	C5B	H6'2	120.0°	120.1°
O1B	C6B	C5B	H5'1	61.1°	177.2°
O1B	C6B	C5B	H5'2	176.4°	57.1°
O1B	C6B	H6A1	H6'2	119.1°	119.9°
C3B	C2B	H2A1	H2'2	116.5°	119.9°
C2B	C3B	N4'	H3'1	115.2°	120.1°
C2B	C3B	N4'	H3'2	120.0°	120.0°
C2B	C3B	H3'1	H3'2	117.1°	119.9°
C2B	C3B	N4'	C5B	4.3°	59.3°
C2B	C3B	N4'	C7B	129.8°	173.1°
H2A1	C2B	C3B	N4'	100.3°	177.0°
H2A1	C2B	C3B	H3'1	14.9°	62.9°
H2A1	C2B	C3B	H3'2	139.7°	57.0°
H2'2	C2B	C3B	N4'	133.6°	57.2°
H2'2	C2B	C3B	H3'1	111.3°	177.2°
H2'2	C2B	C3B	H3'2	13.6°	62.8°
N4'	C3B	H3'1	H3'2	117.2°	120.0°
C3B	N4'	C5B	C7B	136.5°	113.7°
C3B	N4'	C5B	C6B	37.7°	59.3°
C3B	N4'	C5B	H5'1	79.8°	179.3°
C3B	N4'	C5B	H5'2	157.7°	60.7°
C3B	N4'	C7B	C8'	107.8°	170.0°
C3B	N4'	C7B	H7'1	7.7°	50.0°
C3B	N4'	C7B	H7'2	132.2°	70.0°
H3'1	C3B	N4'	C5B	110.8°	60.7°
H3'1	C3B	N4'	C7B	115.0°	53.0°
H3'2	C3B	N4'	C5B	124.3°	179.3°
H3'2	C3B	N4'	C7B	9.8°	67.0°
N4'	C5B	C6B	H5'1	117.5°	120.0°
N4'	C5B	C6B	H5'2	120.0°	120.0°
N4'	C5B	H5'1	H5'2	118.4°	120.0°
N4'	C5B	C6B	H6A1	62.1°	177.0°
N4'	C5B	C6B	H6'2	176.4°	57.2°
C5B	N4'	C7B	C8'	118.6°	56.3°
C5B	N4'	C7B	H7'1	125.9°	63.7°
C5B	N4'	C7B	H7'2	1.4°	176.3°
C7B	N4'	C5B	C6B	98.9°	173.0°
C7B	N4'	C5B	H5'1	143.6°	67.0°
C7B	N4'	C5B	H5'2	21.2°	53.0°
N4'	C7B	C8'	H7'1	115.4°	120.0°
N4'	C7B	C8'	H7'2	120.0°	120.0°
N4'	C7B	H7'1	H7'2	117.3°	120.0°
N4'	C7B	C8'	C9'	167.8°	180.0°
N4'	C7B	C8'	H8'1	71.0°	60.0°
N4'	C7B	C8'	H8'2	47.8°	60.0°
C6B	C5B	H5'1	H5'2	118.5°	120.0°
C5B	C6B	H6A1	H6'2	119.1°	119.8°
H5'1	C5B	C6B	H6A1	179.6°	57.1°
H5'1	C5B	C6B	H6'2	58.9°	62.8°
H5'2	C5B	C6B	H6A1	57.9°	63.0°
H5'2	C5B	C6B	H6'2	63.6°	177.2°
C8'	C7B	H7'1	H7'2	117.3°	120.0°
C7B	C8'	C9'	H8'1	121.2°	119.9°
C7B	C8'	C9'	H8'2	120.0°	120.0°
C7B	C8'	H8'1	H8'2	120.8°	120.0°
C7B	C8'	C9'	H9'1	128.8°	60.0°
C7B	C8'	C9'	H9'2	110.8°	60.0°
H7'1	C7B	C8'	C9'	52.4°	60.0°
H7'1	C7B	C8'	H8'1	173.6°	180.0°
H7'1	C7B	C8'	H8'2	67.6°	59.9°
H7'2	C7B	C8'	C9'	72.2°	60.0°
H7'2	C7B	C8'	H8'1	49.0°	60.0°
H7'2	C7B	C8'	H8'2	167.8°	180.0°
C9'	C8'	H8'1	H8'2	120.8°	120.1°
C8'	C9'	H9'1	H9'2	119.8°	120.0°
H8'1	C8'	C9'	H9'1	110.0°	180.0°
H8'1	C8'	C9'	H9'2	10.4°	60.0°
H8'2	C8'	C9'	H9'1	8.8°	59.9°
H8'2	C8'	C9'	H9'2	129.1°	180.0°

Definition date:	2001-08-16
Last modified:	2020-06-17
Release status:	REL
Processing site:	RCSB
Derived from:	1JQY