Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

A2Z

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2doub1.40Å1.41ÅAromatic
C1C6sing1.37Å1.40ÅAromatic
N1C3sing1.38Å1.41Å
N1C8sing1.34Å1.42Å
N1C16sing1.46Å1.48Å
O1C5sing1.36Å1.38Å
O1C12sing1.44Å1.45Å
C2C3sing1.41Å1.48ÅAromatic
C2C10sing1.46Å1.47Å
O2C4sing1.37Å1.36Å
O2C12sing1.44Å1.45Å
C3C4doub1.39Å1.44ÅAromatic
O3C8doub1.22Å1.25Å
C4C5sing1.39Å1.45ÅAromatic
C5C6doub1.39Å1.39ÅAromatic
C8C9sing1.41Å1.39Å
C9C10doub1.36Å1.40Å
C10C15sing1.51Å1.50Å
C1H1sing1.08Å1.08Å
C6H6sing1.08Å1.08Å
C9H9sing1.08Å1.08Å
C12H12sing1.09Å1.10Å
C12H12Asing1.09Å1.10Å
C15H15sing1.09Å1.10Å
C15H15Asing1.09Å1.10Å
C15H15Bsing1.09Å1.10Å
C16H16sing1.09Å1.10Å
C16H16Asing1.09Å1.10Å
C16H16Bsing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1C6121.6°119.9°
C1C2C3122.8°119.9°
C1C2C10121.9°121.1°
C2C1H1119.2°120.1°
C1C6C5117.7°120.7°
C6C1H1119.2°120.1°
C1C6H6121.2°119.6°
C3N1C8118.5°120.9°
C3N1C16121.4°119.6°
N1C3C2122.5°119.6°
N1C3C4123.5°120.9°
C8N1C16120.1°119.5°
N1C8O3120.5°119.2°
N1C8C9121.2°121.7°
N1C16H16109.5°109.5°
N1C16H16A109.5°109.5°
N1C16H16B109.4°109.5°
C5O1C12109.3°105.6°
O1C5C4106.3°108.6°
O1C5C6130.3°131.1°
O1C12O2106.1°103.6°
O1C12H12110.6°110.7°
O1C12H12A110.6°110.5°
C3C2C10115.3°119.0°
C2C3C4114.1°119.5°
C2C10C9120.5°118.6°
C2C10C15118.5°120.7°
C4O2C12107.2°105.4°
O2C4C3128.8°131.5°
O2C4C5110.7°108.7°
O2C12H12110.6°110.6°
O2C12H12A110.6°110.5°
C3C4C5120.5°119.8°
O3C8C9118.3°119.2°
C4C5C6123.4°120.3°
C5C6H6121.2°119.7°
C8C9C10122.0°120.3°
C8C9H9119.0°119.9°
C9C10C15121.0°120.7°
C10C9H9119.0°119.9°
C10C15H15109.5°109.4°
C10C15H15A109.5°109.4°
C10C15H15B109.5°109.5°
H12C12H12A108.3°110.7°
H15C15H15A109.4°109.5°
H15C15H15B109.5°109.5°
H15AC15H15B109.5°109.5°
H16C16H16A109.4°109.5°
H16C16H16B109.4°109.4°
H16AC16H16B109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1C6H1180.0°179.7°
C1C2C3N1179.2°179.9°
C1C2C3C10179.9°180.0°
C1C2C3C40.4°0.2°
C2C1C6C51.0°0.0°
C1C2C10C9178.8°180.0°
C1C2C10C150.1°0.1°
C2C1C6H6179.0°180.0°
C1C6C5O1179.1°179.9°
C6C1C2C30.1°0.1°
C6C1C2C10180.0°179.9°
C1C6C5C41.9°0.0°
C1C6C5H6180.0°180.0°
C3N1C8C16178.4°179.9°
N1C3C2C4179.5°179.9°
N1C3C2C100.8°0.1°
N1C3C4O20.3°0.0°
C3N1C8O3179.6°180.0°
N1C3C4C5180.0°180.0°
C3N1C8C91.5°0.0°
C3N1C16H16180.0°90.0°
C3N1C16H16A60.0°149.9°
C3N1C16H16B60.0°29.9°
C8N1C3C20.5°0.0°
C8N1C3C4179.0°179.9°
N1C8O3C9179.0°180.0°
N1C8C9C101.1°0.1°
N1C8C9H9178.9°180.0°
C8N1C16H161.7°90.1°
C8N1C16H16A121.7°30.0°
C8N1C16H16B118.3°150.0°
C16N1C3C2178.9°179.9°
C16N1C3C40.6°0.2°
C16N1C8O31.2°0.1°
C16N1C8C9179.9°179.9°
N1C16H16H16A120.0°120.1°
N1C16H16H16B120.0°120.0°
N1C16H16AH16B120.0°120.0°
O1C5C4O20.3°0.0°
C5O1C12O26.6°27.1°
O1C5C4C3179.4°180.0°
O1C5C4C6177.8°180.0°
O1C5C6H60.9°0.1°
C5O1C12H12126.6°145.7°
C5O1C12H12A113.4°91.4°
O1C12O2C46.6°27.0°
O1C12O2H12120.0°118.6°
O1C12O2H12A120.0°118.4°
C12O1C5C44.0°17.2°
C12O1C5C6173.6°162.7°
O1C12H12H12A121.4°122.9°
C2C3C4O2179.2°179.9°
C2C3C4C50.5°0.1°
C3C2C10C91.1°0.0°
C3C2C10C15179.8°179.9°
C3C2C1H1179.9°179.6°
C10C2C3C4179.7°179.8°
C2C10C9C80.2°0.0°
C2C10C9C15178.6°179.9°
C10C2C1H10.0°0.4°
C2C10C9H9179.8°180.0°
C2C10C15H15180.0°90.0°
C2C10C15H15A60.0°150.0°
C2C10C15H15B60.0°30.0°
O2C4C3C5179.7°179.9°
O2C4C5C6178.1°180.0°
C4O2C12H12126.7°145.7°
C4O2C12H12A113.4°91.4°
C12O2C4C3175.3°162.8°
C12O2C4C54.4°17.3°
O2C12H12H12A121.4°122.9°
C3C4C5C61.6°0.1°
O3C8C9C10179.9°179.9°
O3C8C9H90.1°0.0°
C4C5C6H6178.1°180.0°
C5C6C1H1179.0°179.7°
C8C9C10H9180.0°180.0°
C8C9C10C15178.8°180.0°
C9C10C15H151.3°90.0°
C9C10C15H15A118.6°29.9°
C9C10C15H15B121.4°149.9°
C15C10C9H91.2°0.0°
C10C15H15H15A120.0°119.9°
C10C15H15H15B120.0°120.0°
C10C15H15AH15B120.0°120.0°
H1C1C6H61.0°0.3°
H15C15H15AH15B120.0°120.0°
H16C16H16AH16B120.0°119.9°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon