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A2R

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
OP3P2'sing1.61Å1.52Å
OP3HOP3sing0.97Å0.95Å
P2'OP2doub1.48Å1.52Å
P2'OP1sing1.61Å1.51Å
P2'O2'sing1.61Å1.62Å
OP1HOP1sing0.97Å0.95Å
O2'C2'sing1.43Å1.42Å
C2'C1'sing1.54Å1.52Å
C2'C3'sing1.55Å1.51Å
C2'H2'sing1.09Å1.10Å
C1'N9sing1.46Å1.47Å
C1'O4'sing1.44Å1.40Å
C1'H1'sing1.09Å1.10Å
N9C4sing1.37Å1.34ÅAromatic
N9C8sing1.36Å1.36ÅAromatic
C4C5doub1.40Å1.38ÅAromatic
C4N3sing1.33Å1.37ÅAromatic
N3C2doub1.32Å1.34ÅAromatic
C2N1sing1.32Å1.34ÅAromatic
C2H2sing1.08Å1.08Å
N1C6doub1.33Å1.38ÅAromatic
C6N6sing1.38Å1.35Å
C6C5sing1.41Å1.39ÅAromatic
N6HN61sing0.97Å1.00Å
N6HN62sing0.97Å1.00Å
C5N7sing1.35Å1.36ÅAromatic
N7C8doub1.30Å1.35ÅAromatic
C8H8sing1.08Å1.08Å
O4'C4'sing1.44Å1.42Å
C3'C4'sing1.54Å1.53Å
C3'O3'sing1.43Å1.44Å
C3'H3'sing1.09Å1.10Å
O3'HO3'sing0.97Å0.95Å
C4'C5'sing1.53Å1.52Å
C4'H4'sing1.09Å1.10Å
C5'O5'sing1.43Å1.42Å
C5'H5'1sing1.09Å1.10Å
C5'H5'2sing1.09Å1.10Å
O5'Psing1.61Å1.62Å
PO1doub1.48Å1.51Å
PO3sing1.61Å1.60Å
PO2sing1.61Å1.51Å
O2HO2sing0.97Å0.95Å
O3P1sing1.61Å1.59Å
P1O15'sing1.61Å1.62Å
P1O12doub1.48Å1.51Å
P1O11sing1.61Å1.51Å
O11HO11sing0.97Å0.95Å
O15'C15'sing1.43Å1.44Å
C15'C14'sing1.53Å1.54Å
C15'H5'3sing1.09Å1.10Å
C15'H5'4sing1.09Å1.10Å
C14'C13'sing1.54Å1.53Å
C14'O14'sing1.44Å1.44Å
C14'H14'sing1.09Å1.10Å
C13'O13'sing1.43Å1.45Å
C13'C12'sing1.54Å1.53Å
C13'H13'sing1.09Å1.10Å
O13'H16'sing0.97Å0.95Å
C12'O12'sing1.43Å1.43Å
C12'C11'sing1.54Å1.53Å
C12'H12'sing1.09Å1.10Å
O12'H15'sing0.97Å0.95Å
C11'O14'sing1.44Å1.44Å
C11'O11'sing1.43Å1.43Å
C11'H11'sing1.09Å1.10Å
O11'H17'sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
P2'OP3HOP3109.5°114.0°
OP3P2'OP2115.1°109.5°
OP3P2'OP1115.8°109.5°
OP3P2'O2'101.4°109.5°
OP2P2'OP1112.1°109.5°
OP2P2'O2'107.1°109.5°
OP1P2'O2'103.6°109.5°
P2'OP1HOP1109.5°114.0°
P2'O2'C2'123.8°123.0°
O2'C2'C1'106.6°110.6°
O2'C2'C3'112.6°110.5°
O2'C2'H2'107.5°110.5°
C1'C2'C3'103.0°104.0°
C1'C2'H2'116.4°110.5°
C2'C1'N9110.7°110.4°
C2'C1'O4'105.7°104.8°
C2'C1'H1'114.0°110.4°
C3'C2'H2'110.8°110.6°
C2'C3'C4'103.8°104.1°
C2'C3'O3'111.9°110.5°
C2'C3'H3'111.7°110.5°
N9C1'O4'116.6°110.4°
N9C1'H1'102.3°110.3°
C1'N9C4122.0°126.3°
C1'N9C8128.1°126.2°
O4'C1'H1'107.7°110.4°
C1'O4'C4'107.8°105.3°
C4N9C8109.8°107.4°
N9C4C5107.0°106.1°
N9C4N3132.1°134.9°
N9C8N7106.9°109.9°
N9C8H8126.6°125.0°
C5C4N3120.9°119.1°
C4C5C6118.1°118.2°
C4C5N7107.4°107.2°
C4N3C2119.6°120.6°
N3C2N1121.4°122.4°
N3C2H2119.3°118.8°
N1C2H2119.3°118.8°
C2N1C6120.6°121.2°
N1C6N6120.8°120.8°
N1C6C5119.5°118.4°
N6C6C5119.8°120.8°
C6N6HN61109.5°120.0°
C6N6HN62109.5°120.0°
C6C5N7134.4°134.6°
HN61N6HN62109.5°120.0°
C5N7C8108.8°109.4°
N7C8H8126.5°125.0°
O4'C4'C3'107.7°104.8°
O4'C4'C5'107.8°110.4°
O4'C4'H4'112.2°110.4°
C4'C3'O3'109.6°110.6°
C4'C3'H3'113.9°110.5°
C3'C4'C5'111.0°110.4°
C3'C4'H4'109.1°110.3°
O3'C3'H3'106.2°110.6°
C3'O3'HO3'109.5°114.0°
C5'C4'H4'109.0°110.4°
C4'C5'O5'107.2°109.5°
C4'C5'H5'1110.3°109.5°
C4'C5'H5'2110.7°109.4°
O5'C5'H5'1110.2°109.5°
O5'C5'H5'2110.7°109.5°
C5'O5'P121.9°123.0°
H5'1C5'H5'2107.7°109.5°
O5'PO1109.1°109.4°
O5'PO3102.7°109.5°
O5'PO2107.2°109.5°
O1PO3105.7°109.5°
O1PO2117.7°109.5°
O3PO2113.4°109.5°
PO3P1129.0°134.0°
PO2HO2109.5°114.0°
O3P1O15'100.0°109.5°
O3P1O12110.1°109.5°
O3P1O11106.3°109.4°
O15'P1O12106.1°109.5°
O15'P1O11106.1°109.5°
P1O15'C15'122.7°123.0°
O12P1O11125.3°109.5°
P1O11HO11109.5°114.0°
O15'C15'C14'109.5°109.5°
O15'C15'H5'3109.4°109.5°
O15'C15'H5'4109.4°109.5°
C14'C15'H5'3109.5°109.5°
C14'C15'H5'4109.5°109.4°
C15'C14'C13'112.3°110.4°
C15'C14'O14'109.5°110.3°
C15'C14'H14'106.3°110.4°
H5'3C15'H5'4109.5°109.5°
C13'C14'O14'105.5°104.8°
C13'C14'H14'110.2°110.4°
C14'C13'O13'109.6°110.5°
C14'C13'C12'103.1°104.1°
C14'C13'H13'113.5°110.5°
O14'C14'H14'113.1°110.5°
C14'O14'C11'110.3°105.3°
O13'C13'C12'109.6°110.5°
O13'C13'H13'107.5°110.5°
C13'O13'H16'109.5°114.0°
C12'C13'H13'113.5°110.6°
C13'C12'O12'112.7°110.5°
C13'C12'C11'100.5°104.1°
C13'C12'H12'114.5°110.6°
O12'C12'C11'113.1°110.5°
O12'C12'H12'102.4°110.4°
C12'O12'H15'109.5°114.0°
C11'C12'H12'114.1°110.6°
C12'C11'O14'105.2°104.8°
C12'C11'O11'112.5°110.4°
C12'C11'H11'110.9°110.4°
O14'C11'O11'111.0°110.4°
O14'C11'H11'112.4°110.4°
O11'C11'H11'105.0°110.4°
C11'O11'H17'109.5°114.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OP3P2'OP2OP1135.2°120.0°
OP3P2'OP2O2'111.8°120.0°
OP3P2'OP1O2'110.0°120.0°
OP3P2'OP1HOP141.1°60.0°
OP3P2'O2'C2'77.9°65.0°
HOP3OP3P2'OP287.6°180.0°
HOP3OP3P2'OP1138.9°60.1°
HOP3OP3P2'O2'27.6°60.0°
OP2P2'OP1O2'115.2°120.0°
OP2P2'OP1HOP1175.9°60.0°
OP2P2'O2'C2'43.1°55.0°
OP1P2'O2'C2'161.8°175.0°
O2'P2'OP1HOP169.0°180.0°
P2'O2'C2'C1'132.7°120.0°
P2'O2'C2'C3'115.1°125.4°
P2'O2'C2'H2'7.2°2.7°
O2'C2'C1'C3'118.7°118.6°
O2'C2'C1'H2'119.8°122.6°
O2'C2'C3'H2'120.4°122.7°
O2'C2'C1'N981.5°98.5°
O2'C2'C1'O4'151.3°142.6°
O2'C2'C1'H1'33.2°23.7°
O2'C2'C3'C4'132.4°118.7°
O2'C2'C3'O3'14.4°0.0°
O2'C2'C3'H3'104.5°122.7°
C1'C2'C3'H2'125.2°118.7°
C2'C1'N9O4'120.9°115.4°
C2'C1'N9H1'121.9°122.2°
C2'C1'O4'H1'122.2°118.9°
C2'C1'N9C4128.2°85.0°
C2'C1'N9C848.0°95.4°
C2'C1'O4'C4'35.0°40.5°
C1'C2'C3'C4'18.0°0.0°
C1'C2'C3'O3'100.1°118.7°
C1'C2'C3'H3'141.1°118.6°
C3'C2'C1'N9159.8°142.8°
C3'C2'C1'O4'32.6°24.0°
C3'C2'C1'H1'85.5°95.0°
C2'C3'C4'O4'1.7°23.9°
C2'C3'C4'O3'119.6°118.7°
C2'C3'C4'H3'121.7°118.6°
C2'C3'O3'H3'122.0°122.6°
C2'C3'O3'HO3'137.7°180.0°
C2'C3'C4'C5'119.5°142.8°
C2'C3'C4'H4'120.3°94.8°
H2'C2'C1'N938.4°24.1°
H2'C2'C1'O4'88.8°94.8°
H2'C2'C1'H1'153.1°146.3°
H2'C2'C3'C4'107.2°118.7°
H2'C2'C3'O3'134.7°122.6°
H2'C2'C3'H3'15.9°0.0°
N9C1'O4'H1'114.3°122.2°
C1'N9C4C8176.9°179.7°
C1'N9C4C5177.1°180.0°
C1'N9C4N33.6°0.0°
C1'N9C8N7176.0°179.9°
C1'N9C8H84.0°0.0°
N9C1'O4'C4'158.5°159.4°
O4'C1'N9C4110.9°159.6°
O4'C1'N9C872.8°20.1°
C1'O4'C4'C3'23.1°40.4°
C1'O4'C4'C5'142.9°159.3°
C1'O4'C4'H4'97.0°78.3°
H1'C1'N9C46.4°37.3°
H1'C1'N9C8169.9°142.4°
H1'C1'O4'C4'87.2°78.4°
N9C4C5N3179.4°180.0°
N9C4N3C2179.4°180.0°
N9C4C5C6179.4°180.0°
N9C4C5N71.1°0.0°
C4N9C8N70.7°0.4°
C4N9C8H8179.4°179.7°
C8N9C4C50.3°0.2°
C8N9C4N3179.5°179.8°
N9C8N7C51.3°0.4°
N9C8N7H8180.0°179.9°
C5C4N3C20.2°0.0°
C4C5C6N10.1°0.0°
C4C5C6N6179.8°180.0°
C4C5C6N7179.4°180.0°
C4C5N7C81.5°0.3°
C4N3C2N10.6°0.0°
C4N3C2H2179.4°180.0°
N3C4C5C60.0°0.0°
N3C4C5N7179.6°180.0°
N3C2N1H2180.0°179.9°
N3C2N1C60.8°0.1°
C2N1C6N6179.4°180.0°
C2N1C6C50.5°0.1°
H2C2N1C6179.3°180.0°
N1C6N6C5179.9°179.9°
N1C6N6HN613.8°0.1°
N1C6N6HN62123.9°180.0°
N1C6C5N7179.6°180.0°
C6N6HN61HN62120.0°179.9°
N6C6C5N70.4°0.1°
C5C6N6HN61176.2°180.0°
C5C6N6HN6256.2°0.1°
C6C5N7C8179.1°179.8°
C5N7C8H8178.7°179.7°
O4'C4'C3'C5'117.8°118.9°
O4'C4'C3'H4'122.0°118.8°
O4'C4'C3'O3'121.3°142.6°
O4'C4'C3'H3'120.0°94.7°
O4'C4'C5'H4'122.1°122.3°
O4'C4'C5'O5'178.8°66.5°
O4'C4'C5'H5'158.9°173.6°
O4'C4'C5'H5'260.3°53.5°
C4'C3'O3'H3'123.4°122.7°
C4'C3'O3'HO3'107.7°65.3°
C3'C4'C5'H4'120.2°122.3°
C3'C4'C5'O5'61.1°178.1°
C3'C4'C5'H5'158.9°58.2°
C3'C4'C5'H5'2178.0°61.9°
O3'C3'C4'C5'120.8°98.5°
O3'C3'C4'H4'0.7°23.8°
H3'C3'O3'HO3'15.6°57.4°
H3'C3'C4'C5'2.1°24.2°
H3'C3'C4'H4'118.0°146.5°
C4'C5'O5'H5'1120.0°120.0°
C4'C5'O5'H5'2120.9°120.0°
C4'C5'H5'1H5'2121.0°120.0°
C4'C5'O5'P138.2°180.0°
H4'C4'C5'O5'59.1°55.9°
H4'C4'C5'H5'1179.1°64.1°
H4'C4'C5'H5'261.8°175.9°
O5'C5'H5'1H5'2120.9°120.0°
C5'O5'PO130.7°55.0°
C5'O5'PO381.1°175.0°
C5'O5'PO2159.2°65.0°
H5'1C5'O5'P18.2°60.0°
H5'2C5'O5'P100.9°60.1°
O5'PO1O3109.9°120.0°
O5'PO1O2122.3°120.0°
O5'PO3O2115.3°120.0°
O5'PO2HO2108.8°60.0°
O5'PO3P176.3°160.0°
O1PO3O2130.4°120.0°
O1PO2HO2128.0°180.0°
O1PO3P1169.4°40.1°
O3PO2HO23.9°60.0°
PO3P1O15'144.4°159.9°
PO3P1O1233.1°40.0°
PO3P1O11105.4°80.0°
O2PO3P139.0°80.0°
O3P1O15'O12114.5°120.0°
O3P1O15'O11110.4°120.0°
O3P1O12O11128.7°120.0°
O3P1O11HO1139.7°60.0°
O3P1O15'C15'105.5°175.0°
O15'P1O12O11124.0°120.0°
O15'P1O11HO1166.1°60.0°
P1O15'C15'C14'174.5°179.9°
P1O15'C15'H5'354.5°60.0°
P1O15'C15'H5'465.6°60.0°
O12P1O11HO11170.0°180.0°
O12P1O15'C15'9.0°55.0°
O11P1O15'C15'144.2°65.0°
O15'C15'C14'H5'3120.0°120.0°
O15'C15'C14'H5'4120.0°120.0°
O15'C15'H5'3H5'4120.0°120.0°
O15'C15'C14'C13'68.6°175.0°
O15'C15'C14'O14'48.2°69.7°
O15'C15'C14'H14'170.7°52.7°
C14'C15'H5'3H5'4120.0°120.0°
C15'C14'C13'O14'119.2°118.8°
C15'C14'C13'H14'118.4°122.3°
C15'C14'O14'H14'118.4°122.3°
C15'C14'C13'O13'150.8°98.6°
C15'C14'C13'C12'92.6°142.7°
C15'C14'C13'H13'30.6°24.0°
C15'C14'O14'C11'117.2°159.3°
H5'3C15'C14'C13'51.3°65.0°
H5'3C15'C14'O14'168.2°50.4°
H5'3C15'C14'H14'69.3°172.8°
H5'4C15'C14'C13'171.4°55.0°
H5'4C15'C14'O14'71.8°170.3°
H5'4C15'C14'H14'50.7°67.3°
C13'C14'O14'H14'120.6°118.8°
C14'C13'O13'C12'112.5°114.7°
C14'C13'O13'H13'123.8°122.6°
C14'C13'C12'H13'123.2°118.7°
C14'C13'O13'H16'136.2°179.9°
C14'C13'C12'O12'158.3°118.6°
C14'C13'C12'C11'37.6°0.0°
C14'C13'C12'H12'85.2°118.8°
C13'C14'O14'C11'3.9°40.5°
O14'C14'C13'O13'90.0°142.6°
O14'C14'C13'C12'26.6°24.0°
O14'C14'C13'H13'149.8°94.8°
C14'O14'C11'C12'20.7°40.5°
C14'O14'C11'O11'142.7°159.3°
C14'O14'C11'H11'100.0°78.3°
H14'C14'C13'O13'32.4°23.7°
H14'C14'C13'C12'149.0°95.0°
H14'C14'C13'H13'87.8°146.3°
H14'C14'O14'C11'124.4°78.3°
O13'C13'C12'H13'120.2°122.6°
O13'C13'C12'O12'41.7°0.1°
O13'C13'C12'C11'79.0°118.6°
O13'C13'C12'H12'158.2°122.5°
C12'C13'O13'H16'111.3°65.4°
C13'C12'O12'C11'113.2°114.6°
C13'C12'O12'H12'123.5°122.7°
C13'C12'C11'H12'123.1°118.8°
C13'C12'O12'H15'2.6°180.0°
C13'C12'C11'O14'36.0°24.0°
C13'C12'C11'O11'157.0°142.8°
C13'C12'C11'H11'85.7°94.8°
H13'C13'O13'H16'12.5°57.4°
H13'C13'C12'O12'78.4°122.7°
H13'C13'C12'C11'160.9°118.7°
H13'C13'C12'H12'38.1°0.1°
O12'C12'C11'H12'116.5°122.6°
O12'C12'C11'O14'156.4°142.6°
O12'C12'C11'O11'82.5°98.6°
O12'C12'C11'H11'34.7°23.8°
C11'C12'O12'H15'110.7°65.4°
C12'C11'O14'O11'122.0°118.8°
C12'C11'O14'H11'120.7°118.8°
C12'C11'O11'H11'120.7°122.3°
C12'C11'O11'H17'60.8°179.9°
H12'C12'O12'H15'126.1°57.4°
H12'C12'C11'O14'87.1°94.8°
H12'C12'C11'O11'33.9°24.0°
H12'C12'C11'H11'151.2°146.4°
O14'C11'O11'H11'121.7°122.3°
O14'C11'O11'H17'178.4°64.6°
H11'C11'O11'H17'59.8°57.7°

222415

PDB entries from 2024-07-10

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