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A24

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1O1sing1.43Å1.43Å
C1C2sing1.53Å1.51Å
C1O5sing1.43Å1.44Å
C1H11sing1.09Å1.10Å
O1C1'sing1.36Å1.41Å
C2O2sing1.43Å1.45Å
C2C3sing1.53Å1.51Å
C2H21sing1.09Å1.10Å
O2HO21sing0.97Å0.95Å
C3O3sing1.43Å1.43Å
C3C4sing1.53Å1.55Å
C3H31sing1.09Å1.10Å
O3HO31sing0.97Å0.95Å
C4O4sing1.43Å1.45Å
C4C5sing1.53Å1.51Å
C4H41sing1.09Å1.10Å
O4HO41sing0.97Å0.95Å
C5O5sing1.43Å1.44Å
C5C6sing1.53Å1.53Å
C5H51sing1.09Å1.10Å
C6O6sing1.43Å1.42Å
C6H61sing1.09Å1.10Å
C6H62sing1.09Å1.10Å
O6HO1sing0.97Å0.95Å
C1'C2'doub1.39Å1.38ÅAromatic
C1'C6'sing1.38Å1.38ÅAromatic
C2'C3'sing1.38Å1.40ÅAromatic
C2'H2'1sing1.08Å1.08Å
C3'C4'doub1.38Å1.38ÅAromatic
C3'N1'sing1.48Å1.41Å
C4'C5'sing1.40Å1.38ÅAromatic
C4'H4'1sing1.08Å1.08Å
C5'C6'doub1.39Å1.40ÅAromatic
C5'C7'sing1.48Å1.42Å
C6'H6'1sing1.08Å1.08Å
N1'O1'sing1.22Å1.26Å
N1'O2'doub1.22Å1.28Å
C7'O3'doub1.22Å1.31Å
C7'N2'sing1.35Å1.33Å
N2'C8'sing1.47Å1.43Å
N2'HN21sing0.97Å1.00Å
O1BC2Bsing1.43Å1.41Å
O1BC6Bsing1.43Å1.42Å
C2BC3Bsing1.53Å1.56Å
C2BH2A1sing1.09Å1.10Å
C2BH2'2sing1.09Å1.10Å
C3BN4'sing1.47Å1.50Å
C3BH3'1sing1.09Å1.10Å
C3BH3'2sing1.09Å1.10Å
N4'C5Bsing1.47Å1.51Å
N4'C7Bsing1.47Å1.49Å
C5BC6Bsing1.53Å1.52Å
C5BH5'1sing1.09Å1.10Å
C5BH5'2sing1.09Å1.10Å
C6BH6A1sing1.09Å1.10Å
C6BH6'2sing1.09Å1.10Å
C7BC8'sing1.53Å1.50Å
C7BH7'1sing1.09Å1.10Å
C7BH7'2sing1.09Å1.10Å
C8'H8'1sing1.09Å1.10Å
C8'H8'2sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1C1C2104.6°109.4°
O1C1O5106.8°109.4°
O1C1H11115.6°109.4°
C1O1C1'115.0°106.8°
C2C1O5113.3°109.8°
C2C1H11109.4°109.4°
C1C2O2110.4°109.5°
C1C2C3110.6°109.0°
C1C2H21108.0°109.5°
O5C1H11107.3°109.4°
C1O5C5113.5°107.6°
O1C1'C2'116.6°120.0°
O1C1'C6'118.2°120.0°
O2C2C3109.2°109.7°
O2C2H21109.4°109.6°
C2O2HO21109.5°106.9°
C3C2H21109.2°109.6°
C2C3O3105.7°109.6°
C2C3C4110.2°108.6°
C2C3H31111.5°109.6°
O3C3C4109.5°109.7°
O3C3H31112.1°109.6°
C3O3HO31109.5°106.8°
C4C3H31107.8°109.7°
C3C4O4107.6°109.5°
C3C4C5110.2°109.0°
C3C4H41110.3°109.5°
O4C4C5109.5°109.7°
O4C4H41111.0°109.5°
C4O4HO41109.5°106.8°
C5C4H41108.3°109.5°
C4C5O5110.8°109.7°
C4C5C6113.4°109.4°
C4C5H51104.6°109.4°
O5C5C6105.3°109.4°
O5C5H51112.8°109.4°
C6C5H51110.2°109.4°
C5C6O6111.1°109.5°
C5C6H61108.6°109.5°
C5C6H62108.9°109.5°
O6C6H61108.6°109.5°
O6C6H62109.0°109.4°
C6O6HO1109.5°106.9°
H61C6H62110.7°109.5°
C2'C1'C6'125.2°120.0°
C1'C2'C3'116.0°120.3°
C1'C2'H2'1122.0°119.9°
C1'C6'C5'118.2°119.8°
C1'C6'H6'1120.9°120.1°
C3'C2'H2'1122.0°119.9°
C2'C3'C4'119.0°120.2°
C2'C3'N1'112.7°119.9°
C4'C3'N1'128.2°119.9°
C3'C4'C5'124.7°119.9°
C3'C4'H4'1117.6°120.0°
C3'N1'O1'117.6°120.0°
C3'N1'O2'110.5°120.0°
C5'C4'H4'1117.7°120.0°
C4'C5'C6'116.6°119.8°
C4'C5'C7'126.6°120.1°
C6'C5'C7'116.8°120.1°
C5'C6'H6'1120.9°120.1°
C5'C7'O3'118.8°120.0°
C5'C7'N2'122.8°120.0°
O1'N1'O2'131.9°120.0°
O3'C7'N2'118.4°120.0°
C7'N2'C8'145.8°120.0°
C7'N2'HN21107.1°120.0°
C8'N2'HN21107.1°120.0°
N2'C8'C7B125.7°109.5°
N2'C8'H8'1100.5°109.5°
N2'C8'H8'2104.4°109.5°
C2BO1BC6B114.0°107.2°
O1BC2BC3B111.4°109.8°
O1BC2BH2A1108.4°109.4°
O1BC2BH2'2108.8°109.4°
O1BC6BC5B115.3°109.7°
O1BC6BH6A1106.2°109.4°
O1BC6BH6'2107.6°109.5°
C3BC2BH2A1108.4°109.5°
C3BC2BH2'2108.8°109.4°
C2BC3BN4'115.0°109.5°
C2BC3BH3'1106.4°109.5°
C2BC3BH3'2107.6°109.5°
H2A1C2BH2'2111.0°109.3°
N4'C3BH3'1106.4°109.5°
N4'C3BH3'2107.7°109.5°
C3BN4'C5B109.7°106.7°
C3BN4'C7B119.6°106.7°
H3'1C3BH3'2113.9°109.4°
C5BN4'C7B111.7°106.7°
N4'C5BC6B113.8°109.5°
N4'C5BH5'1107.0°109.4°
N4'C5BH5'2108.0°109.4°
N4'C7BC8'120.1°109.5°
N4'C7BH7'1103.6°109.4°
N4'C7BH7'2106.1°109.5°
C6BC5BH5'1107.1°109.5°
C6BC5BH5'2108.0°109.5°
C5BC6BH6A1106.2°109.4°
C5BC6BH6'2107.5°109.4°
H5'1C5BH5'2112.9°109.4°
H6A1C6BH6'2114.2°109.4°
C8'C7BH7'1103.6°109.4°
C8'C7BH7'2106.1°109.5°
C7BC8'H8'1100.6°109.4°
C7BC8'H8'2104.4°109.5°
H7'1C7BH7'2118.2°109.5°
H8'1C8'H8'2123.3°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1C1C2O5116.0°120.1°
O1C1C2H11124.4°119.9°
O1C1O5H11124.5°119.9°
O1C1C2O257.7°61.2°
O1C1C2C363.3°58.8°
O1C1C2H21177.3°178.7°
O1C1O5C559.1°52.4°
C1O1C1'C2'87.6°174.6°
C1O1C1'C6'94.9°5.6°
C2C1O5H11120.8°120.1°
C2C1O1C1'173.4°173.9°
C1C2O2C3121.8°119.6°
C1C2O2H21118.7°120.1°
C1C2C3H21118.7°119.9°
C1C2O2HO2120.6°60.0°
C1C2C3O3170.6°173.6°
C1C2C3C452.3°53.8°
C1C2C3H3167.3°66.1°
C2C1O5C555.5°67.6°
O5C1O1C1'66.2°65.8°
O5C1C2O2173.6°178.8°
O5C1C2C352.7°61.3°
O5C1C2H2166.8°58.6°
C1O5C5C457.0°67.7°
C1O5C5C6180.0°172.3°
C1O5C5H5159.8°52.4°
H11C1O1C1'53.0°54.1°
H11C1C2O266.7°58.7°
H11C1C2C3172.3°178.7°
H11C1C2H2152.9°61.5°
H11C1O5C5176.3°172.3°
O1C1'C2'C6'177.3°179.8°
O1C1'C2'C3'178.9°179.7°
O1C1'C2'H2'11.1°0.2°
O1C1'C6'C5'178.2°180.0°
O1C1'C6'H6'11.8°0.0°
O2C2C3H21119.6°120.3°
O2C2C3O367.7°66.5°
O2C2C3C4174.0°173.6°
O2C2C3H3154.3°53.8°
C3C2O2HO21142.4°179.6°
C2C3O3C4118.7°119.2°
C2C3O3H31121.7°120.3°
C2C3C4H31121.8°119.8°
C2C3O3HO3122.8°60.0°
C2C3C4O464.5°66.3°
C2C3C4C554.8°53.8°
C2C3C4H41174.4°173.6°
H21C2O2HO2198.1°60.1°
H21C2C3O351.9°53.8°
H21C2C3C466.4°66.1°
H21C2C3H31174.0°174.1°
O3C3C4H31122.2°120.5°
O3C3C4O451.4°53.5°
O3C3C4C5170.7°173.6°
O3C3C4H4169.7°66.6°
C4C3O3HO31141.4°179.2°
C3C4O4C5119.7°119.6°
C3C4O4H41120.7°120.1°
C3C4C5H41120.7°119.8°
C3C4O4HO4170.4°60.0°
C3C4C5O556.5°61.4°
C3C4C5C6174.6°178.6°
C3C4C5H5165.3°58.7°
H31C3O3HO3198.9°60.3°
H31C3C4O4173.7°174.0°
H31C3C4C567.0°65.9°
H31C3C4H4152.5°53.9°
O4C4C5H41121.2°120.3°
O4C4C5O561.7°58.6°
O4C4C5C656.5°61.5°
O4C4C5H51176.5°178.7°
C5C4O4HO4149.3°179.6°
C4C5O5C6123.0°120.1°
C4C5O5H51116.8°120.1°
C4C5C6H51116.8°119.9°
C4C5C6O6177.2°174.9°
C4C5C6H6163.4°65.1°
C4C5C6H6257.2°54.9°
H41C4O4HO41168.9°60.2°
H41C4C5O5177.2°178.8°
H41C4C5C664.7°58.8°
H41C4C5H5155.4°61.1°
O5C5C6H51121.9°119.9°
O5C5C6O661.4°64.9°
O5C5C6H6157.9°55.1°
O5C5C6H62178.6°175.1°
C5C6O6H61119.3°120.0°
C5C6O6H62120.0°120.0°
C5C6H61H62119.5°120.0°
C5C6O6HO1139.1°180.0°
H51C5C6O660.4°55.0°
H51C5C6H61179.8°175.0°
H51C5C6H6259.6°65.0°
O6C6H61H62119.6°119.9°
H61C6O6HO1101.6°60.0°
H62C6O6HO119.1°60.0°
C1'C2'C3'H2'1180.0°179.5°
C1'C2'C3'C4'0.4°0.5°
C1'C2'C3'N1'179.6°179.8°
C2'C1'C6'C5'4.5°0.2°
C2'C1'C6'H6'1175.5°179.8°
C6'C1'C2'C3'1.6°0.5°
C6'C1'C2'H2'1178.4°180.0°
C1'C6'C5'C4'6.0°0.0°
C1'C6'C5'H6'1180.0°180.0°
C1'C6'C5'C7'173.6°180.0°
C2'C3'C4'N1'180.0°179.7°
C2'C3'C4'C5'2.6°0.3°
C2'C3'C4'H4'1177.4°179.8°
C2'C3'N1'O1'177.4°179.7°
C2'C3'N1'O2'2.7°0.3°
H2'1C2'C3'C4'179.6°180.0°
H2'1C2'C3'N1'0.4°0.3°
C3'C4'C5'H4'1180.0°179.9°
C3'C4'C5'C6'5.4°0.0°
C3'C4'C5'C7'174.2°180.0°
C4'C3'N1'O1'2.6°0.0°
C4'C3'N1'O2'177.4°180.0°
N1'C3'C4'C5'177.5°180.0°
N1'C3'C4'H4'12.6°0.1°
C3'N1'O1'O2'180.0°180.0°
C4'C5'C6'C7'179.7°180.0°
C4'C5'C6'H6'1174.0°180.0°
C4'C5'C7'O3'176.5°180.0°
C4'C5'C7'N2'2.4°0.0°
H4'1C4'C5'C6'174.6°180.0°
H4'1C4'C5'C7'5.8°0.0°
C6'C5'C7'O3'3.9°0.0°
C6'C5'C7'N2'177.3°180.0°
C7'C5'C6'H6'16.4°0.0°
C5'C7'O3'N2'178.9°180.0°
C5'C7'N2'C8'6.4°180.0°
C5'C7'N2'HN21173.6°0.0°
O3'C7'N2'C8'174.8°0.0°
O3'C7'N2'HN215.2°180.0°
C7'N2'C8'HN21180.0°180.0°
C7'N2'C8'C7B114.2°180.0°
C7'N2'C8'H8'1134.5°60.0°
C7'N2'C8'H8'25.8°60.0°
N2'C8'C7BN4'106.1°180.0°
N2'C8'C7BH8'1111.3°120.0°
N2'C8'C7BH8'2120.0°120.0°
N2'C8'C7BH7'1139.0°60.0°
N2'C8'C7BH7'213.9°60.0°
N2'C8'H8'1H8'2115.1°120.0°
HN21N2'C8'C7B65.8°0.0°
HN21N2'C8'H8'145.5°120.0°
HN21N2'C8'H8'2174.2°120.0°
O1BC2BC3BH2A1119.2°120.1°
O1BC2BC3BH2'2120.0°120.1°
O1BC2BH2A1H2'2119.5°119.8°
O1BC2BC3BN4'39.5°62.9°
O1BC2BC3BH3'1157.0°57.2°
O1BC2BC3BH3'280.5°177.1°
C2BO1BC6BC5B22.1°63.2°
C2BO1BC6BH6A1139.5°176.8°
C2BO1BC6BH6'297.9°56.9°
C6BO1BC2BC3B59.3°63.2°
C6BO1BC2BH2A159.9°176.7°
C6BO1BC2BH2'2179.3°56.9°
O1BC6BC5BN4'35.2°62.9°
O1BC6BC5BH6A1117.4°120.0°
O1BC6BC5BH6'2120.0°120.1°
O1BC6BC5BH5'182.9°177.1°
O1BC6BC5BH5'2155.1°57.1°
O1BC6BH6A1H6'2118.4°119.9°
C3BC2BH2A1H2'2119.5°119.9°
C2BC3BN4'H3'1117.5°120.0°
C2BC3BN4'H3'2120.0°120.0°
C2BC3BH3'1H3'2118.4°120.0°
C2BC3BN4'C5B14.7°59.2°
C2BC3BN4'C7B145.6°173.1°
H2A1C2BC3BN4'79.7°177.0°
H2A1C2BC3BH3'137.8°63.0°
H2A1C2BC3BH3'2160.3°57.0°
H2'2C2BC3BN4'159.5°57.2°
H2'2C2BC3BH3'183.0°177.3°
H2'2C2BC3BH3'239.5°62.8°
N4'C3BH3'1H3'2118.5°120.0°
C3BN4'C5BC7B134.9°113.8°
C3BN4'C5BC6B51.5°59.3°
C3BN4'C5BH5'166.6°179.3°
C3BN4'C5BH5'2171.5°60.8°
C3BN4'C7BC8'80.7°170.0°
C3BN4'C7BH7'134.2°50.0°
C3BN4'C7BH7'2159.3°70.0°
H3'1C3BN4'C5B102.8°60.8°
H3'1C3BN4'C7B28.1°53.0°
H3'2C3BN4'C5B134.7°179.3°
H3'2C3BN4'C7B94.4°66.9°
N4'C5BC6BH5'1118.1°120.0°
N4'C5BC6BH5'2120.0°120.0°
N4'C5BH5'1H5'2118.8°119.9°
N4'C5BC6BH6A182.2°177.1°
N4'C5BC6BH6'2155.1°57.2°
C5BN4'C7BC8'49.3°56.2°
C5BN4'C7BH7'1164.1°63.8°
C5BN4'C7BH7'270.7°176.2°
C7BN4'C5BC6B173.6°173.1°
C7BN4'C5BH5'168.3°66.9°
C7BN4'C5BH5'253.6°53.0°
N4'C7BC8'H7'1114.8°120.0°
N4'C7BC8'H7'2120.0°120.0°
N4'C7BH7'1H7'2117.0°120.0°
N4'C7BC8'H8'1142.5°60.0°
N4'C7BC8'H8'213.9°60.0°
C6BC5BH5'1H5'2118.8°120.0°
C5BC6BH6A1H6'2118.3°119.8°
H5'1C5BC6BH6A1159.7°57.1°
H5'1C5BC6BH6'237.1°62.8°
H5'2C5BC6BH6A137.8°62.9°
H5'2C5BC6BH6'284.9°177.3°
C8'C7BH7'1H7'2116.9°120.0°
C7BC8'H8'1H8'2115.2°120.0°
H7'1C7BC8'H8'127.7°180.0°
H7'1C7BC8'H8'2101.0°60.0°
H7'2C7BC8'H8'197.4°60.0°
H7'2C7BC8'H8'2133.9°NaN°

222415

PDB entries from 2024-07-10

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