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SummaryGeometryRelated PDB entries

A1L0Y

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
CBDCBBsing1.53Å1.53Å
CBCCBBsing1.53Å1.57Å
CBBOBEsing1.43Å1.43Å
CBBCANsing1.51Å1.43Å
CAOCANdoub1.38Å1.39ÅAromatic
CAOCAPsing1.38Å1.38ÅAromatic
CANCAMsing1.38Å1.43ÅAromatic
CAPCAQdoub1.38Å1.41ÅAromatic
CAMCAJdoub1.39Å1.40ÅAromatic
CAQCAJsing1.40Å1.40ÅAromatic
CAQOARsing1.36Å1.35Å
CAJCAFsing1.48Å1.45Å
CAZCAXsing1.51Å1.40Å
CAXCAWdoub1.38Å1.40ÅAromatic
CAXCASsing1.39Å1.40ÅAromatic
CAWCAVsing1.38Å1.38ÅAromatic
OARCASsing1.36Å1.37Å
CASCATdoub1.39Å1.39ÅAromatic
CAVFAYsing1.35Å1.37Å
CAVCAUdoub1.38Å1.40ÅAromatic
CAFCAEdoub1.36Å1.39Å
CAFCAAsing1.42Å1.35Å
CATCAUsing1.38Å1.39ÅAromatic
CATCBAsing1.51Å1.42Å
CAENADsing1.36Å1.42Å
OAGCAAsing1.34Å1.34ÅAromatic
OAGCAHsing1.35Å1.34ÅAromatic
CAACABdoub1.40Å1.36ÅAromatic
CBJNBIsing1.33Å1.34ÅAromatic
CBJCBFdoub1.37Å1.35ÅAromatic
NADCALsing1.47Å1.48Å
NADCACsing1.35Å1.36Å
NBICBHdoub1.32Å1.34ÅAromatic
CAHCBFsing1.47Å1.35Å
CAHCAIdoub1.36Å1.36ÅAromatic
CBFNBGsing1.38Å1.34ÅAromatic
CABCACsing1.46Å1.37Å
CABCAIsing1.41Å1.38ÅAromatic
CACOAKdoub1.22Å1.23Å
CBHNBGsing1.37Å1.35ÅAromatic
CBHCBKsing1.48Å1.36Å
CBPCBKdoub1.40Å1.41ÅAromatic
CBPCBOsing1.38Å1.40ÅAromatic
CBKCBLsing1.40Å1.41ÅAromatic
CBOCBNdoub1.38Å1.39ÅAromatic
CBLCBMdoub1.38Å1.40ÅAromatic
CBNCBMsing1.38Å1.40ÅAromatic
CAZH1sing1.09Å1.10Å
CAZH2sing1.09Å1.10Å
CAZH3sing1.09Å1.10Å
CAWH4sing1.08Å1.08Å
CAUH5sing1.08Å1.08Å
CBAH6sing1.09Å1.10Å
CBAH7sing1.09Å1.10Å
CBAH8sing1.09Å1.10Å
CAPH9sing1.08Å1.08Å
CAOH10sing1.08Å1.08Å
CBCH11sing1.09Å1.10Å
CBCH12sing1.09Å1.10Å
CBCH13sing1.09Å1.10Å
CBDH14sing1.09Å1.10Å
CBDH15sing1.09Å1.10Å
CBDH16sing1.09Å1.10Å
OBEH17sing0.97Å0.95Å
CAMH18sing1.08Å1.08Å
CAEH19sing1.08Å1.08Å
CALH20sing1.09Å1.10Å
CALH21sing1.09Å1.10Å
CALH22sing1.09Å1.10Å
CAIH23sing1.08Å1.08Å
NBGH24sing0.97Å1.00Å
CBJH25sing1.08Å1.08Å
CBLH27sing1.08Å1.08Å
CBMH28sing1.08Å1.08Å
CBNH29sing1.08Å1.08Å
CBOH30sing1.08Å1.08Å
CBPH31sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
CBDCBBCBC107.2°109.4°
CBDCBBOBE109.2°109.5°
CBDCBBCAN111.2°109.5°
CBBCBDH14109.5°109.5°
CBBCBDH15109.5°109.5°
CBBCBDH16109.5°109.4°
CBCCBBOBE104.1°109.5°
CBCCBBCAN110.6°109.5°
CBBCBCH11109.5°109.5°
CBBCBCH12109.4°109.5°
CBBCBCH13109.5°109.5°
OBECBBCAN114.1°109.5°
CBBOBEH17109.5°114.1°
CBBCANCAO118.9°119.9°
CBBCANCAM125.0°119.9°
CANCAOCAP123.0°120.3°
CAOCANCAM116.1°120.2°
CANCAOH10118.5°119.8°
CAOCAPCAQ119.4°120.1°
CAOCAPH9120.3°120.0°
CAPCAOH10118.5°119.8°
CANCAMCAJ123.0°120.0°
CANCAMH18118.5°120.0°
CAPCAQCAJ120.7°119.8°
CAPCAQOAR124.2°120.1°
CAQCAPH9120.3°120.0°
CAMCAJCAQ117.7°119.7°
CAMCAJCAF119.3°120.2°
CAJCAMH18118.5°120.0°
CAJCAQOAR115.1°120.1°
CAQCAJCAF123.0°120.1°
CAQOARCAS125.0°118.0°
CAJCAFCAE119.5°120.0°
CAJCAFCAA122.7°119.9°
CAZCAXCAW117.9°120.0°
CAZCAXCAS123.9°120.0°
CAXCAZH1109.5°109.5°
CAXCAZH2109.5°109.4°
CAXCAZH3109.5°109.5°
CAWCAXCAS118.2°120.0°
CAXCAWCAV120.6°120.0°
CAXCAWH4119.7°120.0°
CAXCASOAR119.7°120.1°
CAXCASCAT121.9°119.9°
CAWCAVFAY119.6°120.0°
CAWCAVCAU120.3°120.0°
CAVCAWH4119.7°120.0°
OARCASCAT118.4°120.1°
CASCATCAU118.5°120.0°
CASCATCBA123.3°120.0°
FAYCAVCAU120.1°120.0°
CAVCAUCAT120.5°120.1°
CAVCAUH5119.8°120.0°
CAECAFCAA117.8°120.1°
CAFCAENAD119.4°122.0°
CAFCAEH19120.3°118.9°
CAFCAAOAG128.1°133.8°
CAFCAACAB124.0°118.5°
CAUCATCBA118.1°120.0°
CATCAUH5119.8°120.0°
CATCBAH6109.5°109.5°
CATCBAH7109.5°109.5°
CATCBAH8109.5°109.5°
CAENADCAL118.4°119.4°
CAENADCAC119.3°121.3°
NADCAEH19120.3°119.0°
CAAOAGCAH109.9°109.9°
OAGCAACAB107.9°107.7°
OAGCAHCBF120.8°125.4°
OAGCAHCAI107.4°109.2°
CAACABCAC118.4°118.9°
CAACABCAI106.9°106.5°
NBICBJCBF108.4°108.3°
CBJNBICBH107.0°109.6°
NBICBJH25125.8°125.9°
CBJCBFCAH124.5°126.7°
CBJCBFNBG108.3°106.6°
CBFCBJH25125.8°125.9°
CALNADCAC122.4°119.4°
NADCALH20109.5°109.4°
NADCALH21109.5°109.4°
NADCALH22109.4°109.5°
NADCACCAB121.1°119.1°
NADCACOAK116.2°120.4°
NBICBHNBG109.5°108.6°
NBICBHCBK124.4°125.7°
CBFCAHCAI131.7°125.4°
CAHCBFNBG127.2°126.7°
CAHCAICAB107.9°106.8°
CAHCAIH23126.0°126.6°
CBFNBGCBH106.7°106.8°
CBFNBGH24126.7°126.6°
CACCABCAI134.6°134.6°
CABCACOAK122.6°120.4°
CABCAIH23126.1°126.6°
NBGCBHCBK126.2°125.7°
CBHNBGH24126.6°126.6°
CBHCBKCBP120.5°120.1°
CBHCBKCBL121.3°120.2°
CBKCBPCBO121.1°119.8°
CBPCBKCBL118.1°119.7°
CBKCBPH31119.5°120.1°
CBPCBOCBN120.1°120.2°
CBPCBOH30119.9°119.9°
CBOCBPH31119.4°120.2°
CBKCBLCBM120.7°119.8°
CBKCBLH27119.6°120.1°
CBOCBNCBM119.5°120.3°
CBOCBNH29120.2°119.9°
CBNCBOH30120.0°119.9°
CBLCBMCBN120.4°120.2°
CBMCBLH27119.7°120.1°
CBLCBMH28119.8°119.9°
CBNCBMH28119.8°119.9°
CBMCBNH29120.2°119.8°
H1CAZH2109.5°109.5°
H1CAZH3109.5°109.5°
H2CAZH3109.4°109.4°
H6CBAH7109.5°109.5°
H6CBAH8109.4°109.4°
H7CBAH8109.5°109.5°
H11CBCH12109.5°109.5°
H11CBCH13109.5°109.5°
H12CBCH13109.5°109.4°
H14CBDH15109.5°109.5°
H14CBDH16109.5°109.5°
H15CBDH16109.4°109.4°
H20CALH21109.5°109.5°
H20CALH22109.5°109.5°
H21CALH22109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
CBDCBBCBCOBE115.6°120.0°
CBDCBBCBCCAN121.4°120.0°
CBDCBBOBECAN125.1°120.0°
CBDCBBCANCAO57.5°89.9°
CBDCBBCANCAM120.9°90.0°
CBDCBBCBCH11180.0°180.0°
CBDCBBCBCH1260.0°60.0°
CBDCBBCBCH1360.0°60.0°
CBBCBDH14H15120.0°120.0°
CBBCBDH14H16120.0°119.9°
CBBCBDH15H16120.0°119.9°
CBDCBBOBEH17180.0°60.0°
CBCCBBOBECAN120.7°120.0°
CBCCBBCANCAO61.4°30.0°
CBCCBBCANCAM120.1°150.0°
CBBCBCH11H12120.0°120.0°
CBBCBCH11H13120.0°120.0°
CBBCBCH12H13120.0°120.0°
CBCCBBCBDH14180.0°60.1°
CBCCBBCBDH1560.0°60.0°
CBCCBBCBDH1660.0°180.0°
CBCCBBOBEH1765.8°180.0°
OBECBBCANCAO178.4°150.0°
OBECBBCANCAM3.1°30.0°
OBECBBCBCH1164.4°60.0°
OBECBBCBCH1255.6°180.0°
OBECBBCBCH13175.6°60.0°
OBECBBCBDH1467.8°60.0°
OBECBBCBDH15172.2°180.0°
OBECBBCBDH1652.3°60.0°
CBBCANCAOCAM178.6°179.9°
CBBCANCAOCAP178.4°180.0°
CBBCANCAMCAJ179.7°180.0°
CBBCANCAOH101.6°0.1°
CANCBBCBCH1158.6°60.0°
CANCBBCBCH12178.6°60.0°
CANCBBCBCH1361.4°180.0°
CANCBBCBDH1459.0°180.0°
CANCBBCBDH1561.0°59.9°
CANCBBCBDH16179.0°60.0°
CANCBBOBEH1754.9°60.0°
CBBCANCAMH180.3°0.1°
CANCAOCAPH10180.0°179.9°
CANCAOCAPCAQ2.2°0.1°
CAOCANCAMCAJ1.8°0.1°
CANCAOCAPH9177.8°179.9°
CAOCANCAMH18178.2°180.0°
CAPCAOCANCAM3.0°0.1°
CAOCAPCAQH9180.0°180.0°
CAOCAPCAQCAJ0.0°0.1°
CAOCAPCAQOAR179.0°179.8°
CANCAMCAJH18180.0°179.9°
CANCAMCAJCAQ0.2°0.1°
CANCAMCAJCAF179.8°179.7°
CAMCANCAOH10177.0°180.0°
CAPCAQCAJCAM1.2°0.1°
CAPCAQCAJOAR179.1°179.8°
CAPCAQCAJCAF178.9°179.7°
CAPCAQOARCAS1.8°0.2°
CAQCAPCAOH10177.8°180.0°
CAMCAJCAQCAF179.9°179.7°
CAMCAJCAQOAR179.8°179.7°
CAMCAJCAFCAE60.7°104.7°
CAMCAJCAFCAA118.3°75.6°
CAJCAQOARCAS177.3°180.0°
CAQCAJCAFCAE119.4°75.0°
CAQCAJCAFCAA61.6°104.8°
CAJCAQCAPH9180.0°179.9°
CAQCAJCAMH18179.8°180.0°
OARCAQCAJCAF0.1°0.1°
CAQOARCASCAX75.8°90.0°
CAQOARCASCAT107.0°89.7°
OARCAQCAPH91.0°0.2°
CAJCAFCAECAA179.1°179.8°
CAJCAFCAENAD178.7°180.0°
CAJCAFCAAOAG1.2°0.0°
CAJCAFCAACAB178.3°179.7°
CAFCAJCAMH180.1°0.3°
CAJCAFCAEH191.3°0.0°
CAZCAXCAWCAS179.2°179.7°
CAZCAXCAWCAV178.7°180.0°
CAZCAXCASOAR2.2°0.0°
CAZCAXCASCAT179.3°179.7°
CAXCAZH1H2120.0°120.0°
CAXCAZH1H3120.0°120.1°
CAXCAZH2H3120.0°119.9°
CAZCAXCAWH41.3°0.0°
CAXCAWCAVH4180.0°179.9°
CAWCAXCASOAR178.7°179.8°
CAWCAXCASCAT1.5°0.5°
CAXCAWCAVFAY179.5°180.0°
CAXCAWCAVCAU1.0°0.0°
CAWCAXCAZH190.4°90.0°
CAWCAXCAZH2149.6°150.0°
CAWCAXCAZH329.6°30.1°
CASCAXCAWCAV0.5°0.3°
CAXCASOARCAT177.2°179.7°
CAXCASCATCAU2.9°0.5°
CAXCASCATCBA179.7°179.7°
CASCAXCAZH190.5°90.2°
CASCAXCAZH229.5°29.8°
CASCAXCAZH3149.5°149.7°
CASCAXCAWH4179.6°179.8°
CAWCAVFAYCAU179.4°180.0°
CAWCAVCAUCAT0.4°0.0°
CAWCAVCAUH5179.6°179.9°
OARCASCATCAU179.9°179.8°
OARCASCATCBA3.2°0.0°
CASCATCAUCAV2.3°0.3°
CASCATCAUCBA176.9°179.7°
CASCATCAUH5177.7°179.7°
CASCATCBAH691.8°89.7°
CASCATCBAH7148.2°30.3°
CASCATCBAH828.2°150.4°
FAYCAVCAUCAT179.0°180.0°
FAYCAVCAWH40.4°0.1°
FAYCAVCAUH51.0°0.0°
CAVCAUCATH5180.0°180.0°
CAVCAUCATCBA179.2°180.0°
CAUCAVCAWH4179.0°180.0°
CAFCAENADH19180.0°180.0°
CAECAFCAAOAG179.8°179.8°
CAECAFCAACAB0.7°0.5°
CAFCAENADCAL179.2°180.0°
CAFCAENADCAC0.3°0.1°
CAACAFCAENAD0.3°0.3°
CAFCAAOAGCAB179.6°179.7°
CAFCAAOAGCAH179.3°179.3°
CAFCAACABCAC1.0°0.5°
CAFCAACABCAI179.5°179.7°
CAACAFCAEH19179.7°179.7°
CAUCATCBAH691.5°90.0°
CAUCATCBAH728.6°150.0°
CAUCATCBAH8148.6°29.9°
CBACATCAUH50.8°0.0°
CATCBAH6H7120.0°120.0°
CATCBAH6H8120.0°120.0°
CATCBAH7H8120.0°120.0°
CAENADCALCAC179.4°180.0°
CAENADCACCAB0.6°0.1°
CAENADCACOAK178.9°180.0°
CAENADCALH20180.0°90.0°
CAENADCALH2160.0°150.0°
CAENADCALH2260.0°30.0°
CAAOAGCAHCBF178.6°180.0°
CAAOAGCAHCAI1.5°0.6°
OAGCAACABCAC179.4°179.7°
OAGCAACABCAI0.9°0.1°
CAHOAGCAACAB0.3°0.4°
OAGCAHCBFCBJ6.9°179.7°
OAGCAHCBFCAI176.3°179.3°
OAGCAHCBFNBG171.0°0.0°
OAGCAHCAICAB2.0°0.5°
OAGCAHCAIH23178.0°179.5°
CAACABCACNAD0.9°0.2°
CAACABCAICAH1.8°0.2°
CAACABCACCAI177.9°179.7°
CAACABCACOAK179.1°179.7°
CAACABCAIH23178.2°179.8°
NBICBJCBFH25180.0°179.9°
NBICBJCBFCAH178.5°180.0°
NBICBJCBFNBG0.3°0.2°
CBJNBICBHNBG0.1°0.1°
CBJNBICBHCBK179.7°179.9°
CBFCBJNBICBH0.2°0.1°
CBJCBFCAHNBG177.8°179.7°
CBJCBFCAHCAI176.8°1.0°
CBJCBFNBGCBH0.3°0.3°
CBJCBFNBGH24179.7°179.8°
CALNADCACCAB178.9°180.0°
CALNADCACOAK0.5°0.0°
CALNADCAEH190.8°0.0°
NADCALH20H21120.0°120.0°
NADCALH20H22120.0°120.0°
NADCALH21H22120.0°119.9°
NADCACCABOAK178.2°179.9°
NADCACCABCAI178.8°180.0°
CACNADCAEH19179.7°180.0°
CACNADCALH200.6°90.0°
CACNADCALH21120.6°30.0°
CACNADCALH22119.4°150.0°
NBICBHNBGCBF0.1°0.2°
NBICBHNBGCBK179.6°180.0°
NBICBHCBKCBP10.3°179.7°
NBICBHCBKCBL168.8°0.0°
NBICBHNBGH24179.9°179.9°
CBHNBICBJH25179.8°179.9°
CBFCAHCAICAB178.7°179.9°
CAHCBFNBGCBH178.4°180.0°
CBFCAHCAIH231.3°0.1°
CAHCBFNBGH241.6°0.1°
CAHCBFCBJH251.5°0.1°
CAICAHCBFNBG5.4°179.3°
CAHCAICABCAC179.9°180.0°
CAHCAICABH23180.0°180.0°
CBFNBGCBHH24180.0°179.9°
CBFNBGCBHCBK179.5°179.8°
NBGCBFCBJH25179.7°179.8°
CACCABCAIH230.1°0.0°
CAICABCACOAK2.9°0.0°
NBGCBHCBKCBP169.2°0.3°
NBGCBHCBKCBL11.6°180.0°
CBHCBKCBPCBL179.2°179.8°
CBHCBKCBPCBO179.8°179.7°
CBHCBKCBLCBM179.6°180.0°
CBKCBHNBGH240.5°0.1°
CBHCBKCBLH270.4°0.0°
CBHCBKCBPH310.2°0.1°
CBKCBPCBOH31180.0°179.8°
CBKCBPCBOCBN0.3°0.5°
CBPCBKCBLCBM0.4°0.3°
CBPCBKCBLH27179.6°179.8°
CBKCBPCBOH30179.7°179.7°
CBOCBPCBKCBL0.6°0.5°
CBPCBOCBNH30180.0°179.8°
CBPCBOCBNCBM0.2°0.3°
CBPCBOCBNH29179.8°179.7°
CBKCBLCBMH27180.0°179.9°
CBKCBLCBMCBN0.0°0.0°
CBKCBLCBMH28180.0°180.0°
CBLCBKCBPH31179.4°179.7°
CBOCBNCBMCBL0.3°0.1°
CBOCBNCBMH29180.0°180.0°
CBOCBNCBMH28179.6°180.0°
CBNCBOCBPH31179.7°179.7°
CBLCBMCBNH28180.0°180.0°
CBLCBMCBNH29179.6°179.9°
CBNCBMCBLH27180.0°180.0°
CBMCBNCBOH30179.8°180.0°
H1CAZH2H3120.0°120.0°
H6CBAH7H8120.0°120.0°
H9CAPCAOH102.2°0.0°
H11CBCH12H13120.0°120.0°
H14CBDH15H16120.0°120.0°
H20CALH21H22120.0°120.1°
H27CBLCBMH280.1°0.0°
H28CBMCBNH290.4°0.0°
H29CBNCBOH300.2°0.1°
H30CBOCBPH310.3°0.1°

251174

PDB entries from 2026-03-25

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