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SummaryGeometryRelated PDB entries

A1JVP

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C03N02sing1.47Å1.50Å
C04C03sing1.53Å1.58Å
N05C04sing1.47Å1.49Å
N07C06doub1.33Å1.39ÅAromatic
C08N07sing1.32Å1.36ÅAromatic
C09C08doub1.39Å1.41ÅAromatic
C11C10sing1.51Å1.53Å
C12C11doub1.38Å1.41ÅAromatic
C13C12sing1.38Å1.40ÅAromatic
C14C13doub1.38Å1.40ÅAromatic
C15C14sing1.38Å1.39ÅAromatic
C16C15doub1.38Å1.40ÅAromatic
C10C09sing1.51Å1.51Å
C17C09sing1.39Å1.40ÅAromatic
N18C17doub1.32Å1.36ÅAromatic
C06N05sing1.38Å1.44Å
C19N05sing1.47Å1.49Å
C20C19sing1.53Å1.57Å
N02C01sing1.38Å1.51Å
N21C01doub1.33Å1.35ÅAromatic
C22N21sing1.32Å1.39ÅAromatic
N23C22doub1.32Å1.34ÅAromatic
C24N23sing1.33Å1.36ÅAromatic
C25C24doub1.41Å1.43ÅAromatic
C26C25sing1.46Å1.41ÅAromatic
C27C26doub1.34Å1.38ÅAromatic
N28C27sing1.37Å1.40ÅAromatic
C01C25sing1.40Å1.44ÅAromatic
N02C20sing1.47Å1.49Å
C06N18sing1.32Å1.39ÅAromatic
C11C16sing1.38Å1.40ÅAromatic
C24N28sing1.37Å1.43ÅAromatic
C10H101sing1.09Å1.10Å
C10H102sing1.09Å1.10Å
C13H131sing1.08Å1.08Å
C15H151sing1.08Å1.08Å
C17H171sing1.08Å1.08Å
C20H201sing1.09Å1.10Å
C20H202sing1.09Å1.10Å
C22H221sing1.08Å1.08Å
C26H261sing1.08Å1.08Å
C03H031sing1.09Å1.10Å
C03H032sing1.09Å1.10Å
C04H041sing1.09Å1.10Å
C04H042sing1.09Å1.10Å
C08H081sing1.08Å1.08Å
C12H121sing1.08Å1.08Å
C14H141sing1.08Å1.08Å
C16H161sing1.08Å1.08Å
C19H191sing1.09Å1.10Å
C19H192sing1.09Å1.10Å
C27H271sing1.08Å1.08Å
N28H281sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
N02C03C04111.3°109.4°
C03N02C01115.3°111.0°
C03N02C20110.3°110.9°
N02C03H031109.0°109.5°
N02C03H032109.0°109.5°
C03C04N05112.2°109.3°
C04C03H031109.0°109.4°
C04C03H032109.0°109.5°
C03C04H041108.8°109.5°
C03C04H042108.8°109.5°
C04N05C06120.6°111.0°
C04N05C19109.4°110.9°
N05C04H041108.8°109.4°
N05C04H042108.8°109.5°
C06N07C08117.7°120.8°
N07C06N05118.7°119.2°
N07C06N18121.5°121.5°
N07C08C09125.1°119.2°
N07C08H081117.5°120.4°
C08C09C10124.6°120.7°
C08C09C17112.8°118.5°
C09C08H081117.5°120.4°
C10C11C12121.0°120.0°
C11C10C09114.1°109.4°
C10C11C16122.2°120.0°
C11C10H101108.3°109.5°
C11C10H102108.3°109.5°
C11C12C13122.0°120.0°
C12C11C16116.8°120.1°
C11C12H121119.0°120.0°
C12C13C14119.8°120.0°
C12C13H131120.1°120.0°
C13C12H121119.0°120.0°
C13C14C15119.1°120.0°
C14C13H131120.1°120.0°
C13C14H141120.4°120.0°
C14C15C16120.5°120.0°
C14C15H151119.8°120.0°
C15C14H141120.5°120.0°
C15C16C11121.8°119.9°
C16C15H151119.8°120.0°
C15C16H161119.1°120.0°
C10C09C17122.6°120.7°
C09C10H101108.3°109.4°
C09C10H102108.3°109.5°
C09C17N18125.4°119.2°
C09C17H171117.3°120.4°
C17N18C06117.5°120.8°
N18C17H171117.3°120.4°
C06N05C19122.4°111.0°
N05C06N18119.7°119.2°
N05C19C20112.8°109.4°
N05C19H191108.6°109.6°
N05C19H192108.6°109.5°
C19C20N02111.6°109.4°
C19C20H201108.9°109.4°
C19C20H202108.9°109.5°
C20C19H191108.6°109.4°
C20C19H192108.6°109.4°
N02C01N21121.6°120.8°
N02C01C25120.1°120.9°
C01N02C20117.1°111.0°
C01N21C22119.5°121.0°
N21C01C25118.2°118.3°
N21C22N23128.3°122.7°
N21C22H221115.9°118.7°
C22N23C24110.8°120.7°
N23C22H221115.8°118.6°
N23C24C25127.6°118.5°
N23C24N28123.8°134.3°
C24C25C26106.1°106.2°
C24C25C01115.5°118.7°
C25C24N28108.6°107.2°
C25C26C27109.2°106.8°
C26C25C01138.4°135.1°
C25C26H261125.4°126.6°
C26C27N28110.3°109.8°
C27C26H261125.4°126.6°
C26C27H271124.8°125.1°
C27N28C24105.8°110.0°
N28C27H271124.9°125.1°
C27N28H281127.1°125.0°
N02C20H201108.9°109.5°
N02C20H202108.9°109.5°
C11C16H161119.1°120.1°
C24N28H281127.1°125.0°
H101C10H102109.4°109.5°
H201C20H202109.5°109.5°
H031C03H032109.4°109.5°
H041C04H042109.5°109.5°
H191C19H192109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
N02C03C04H031120.3°120.0°
N02C03C04H032120.3°120.0°
N02C03C04N0528.1°58.4°
C03N02C20C1963.3°59.3°
C03N02C01C20132.4°123.9°
C03N02C01N2135.9°0.4°
C03N02C01C25142.9°180.0°
C03N02C20H20157.1°60.6°
C03N02C20H202176.4°179.3°
N02C03H031H032119.2°120.1°
N02C03C04H04192.3°178.3°
N02C03C04H042148.5°61.6°
C03C04N05H041120.4°119.9°
C03C04N05H042120.4°120.0°
C03C04N05C06145.0°64.6°
C03C04N05C1964.6°59.4°
C04C03N02C01169.7°176.7°
C04C03N02C2034.3°59.3°
C04C03H031H032119.2°120.0°
C03C04H041H042118.7°120.1°
C04N05C06N0717.1°123.8°
C04N05C06C19146.4°123.9°
C04N05C19C2035.3°59.4°
C04N05C06N18166.5°56.2°
N05C04C03H031148.4°178.4°
N05C04C03H03292.2°61.6°
N05C04H041H042118.7°120.1°
C04N05C19H19185.2°60.5°
C04N05C19H192155.8°179.3°
C06N07C08C090.2°0.6°
N07C06N18C171.4°0.0°
N07C06N05N18176.4°180.0°
N07C06N05C19163.5°0.0°
C06N07C08H081179.8°180.0°
N07C08C09H081180.0°179.5°
N07C08C09C10178.7°179.5°
N07C08C09C171.7°0.5°
C08N07C06N05177.8°179.7°
C08N07C06N181.5°0.3°
C08C09C10C1163.3°90.0°
C08C09C10C17176.7°179.9°
C08C09C17N181.8°0.3°
C08C09C10H10157.4°30.0°
C08C09C10H102176.0°149.9°
C08C09C17H171178.2°180.0°
C10C11C12C16177.1°179.4°
C10C11C12C13179.3°180.0°
C10C11C16C15178.8°180.0°
C11C10C09H101120.7°120.0°
C11C10C09H102120.7°120.1°
C11C10C09C17113.4°90.0°
C11C10H101H102117.9°120.0°
C10C11C12H1210.8°0.0°
C10C11C16H1611.2°0.0°
C11C12C13H121180.0°180.0°
C11C12C13C141.2°0.3°
C12C11C16C151.7°0.6°
C12C11C10C09126.1°90.6°
C12C11C10H1015.4°149.5°
C12C11C10H102113.2°29.5°
C11C12C13H131178.8°180.0°
C12C11C16H161178.3°179.4°
C12C13C14H131180.0°179.8°
C12C13C14C150.3°0.1°
C13C12C11C162.1°0.6°
C12C13C14H141179.7°180.0°
C13C14C15H141180.0°180.0°
C13C14C15C160.7°0.0°
C13C14C15H151179.3°179.9°
C14C13C12H121178.8°179.7°
C14C15C16H151180.0°180.0°
C14C15C16C110.3°0.3°
C15C14C13H131179.7°179.7°
C14C15C16H161179.7°179.7°
C15C16C11H161180.0°179.9°
C16C15C14H141179.2°180.0°
C10C09C17N18178.9°179.8°
C09C10C11C1650.8°90.0°
C09C10H101H102117.9°120.0°
C10C09C17H1711.1°0.1°
C10C09C08H0811.3°0.1°
C09C17N18H171180.0°179.7°
C09C17N18C060.4°0.0°
C17C09C10H101125.9°150.0°
C17C09C10H1027.3°30.0°
C17C09C08H081178.3°180.0°
C17N18C06N05177.7°180.0°
C06N05C19C20175.0°64.6°
C06N05C04H04194.5°55.4°
C06N05C04H04224.6°175.5°
C06N05C19H19164.5°175.5°
C06N05C19H19254.5°55.4°
N05C19C20H191120.5°120.0°
N05C19C20H192120.5°120.0°
N05C19C20N0226.7°58.4°
C19N05C06N1820.1°180.0°
N05C19C20H20193.7°61.5°
N05C19C20H202147.0°178.4°
C19N05C04H04155.8°179.3°
C19N05C04H042175.0°60.6°
N05C19H191H192118.4°120.2°
C19C20N02C01162.2°176.8°
C19C20N02H201120.3°119.9°
C19C20N02H202120.3°120.0°
C19C20H201H202119.0°120.1°
C20C19H191H192118.5°120.0°
N02C01N21C25178.9°179.7°
N02C01N21C22178.7°180.0°
N02C01C25C24179.4°180.0°
N02C01C25C261.2°0.1°
C01N02C20H20177.5°63.3°
C01N02C20H20241.8°56.8°
C01N02C03H03149.4°56.8°
C01N02C03H03270.0°63.2°
C01N21C22N230.8°0.2°
N21C01C25C240.5°0.4°
N21C01C25C26179.9°179.6°
N21C01N02C20168.3°124.2°
C01N21C22H221179.3°179.9°
N21C22N23H221180.0°179.7°
N21C22N23C240.5°0.0°
C22N21C01C250.1°0.4°
C22N23C24C250.2°0.0°
C22N23C24N28179.8°180.0°
N23C24C25N28179.6°179.9°
N23C24C25C26179.7°179.8°
N23C24N28C27179.7°180.0°
N23C24C25C010.7°0.2°
C24N23C22H221179.5°179.7°
N23C24N28H2810.4°0.1°
C24C25C26C01179.4°179.9°
C24C25C26C270.1°0.4°
C25C24N28C270.0°0.0°
C24C25C26H261179.9°180.0°
C25C24N28H281180.0°180.0°
C25C26C27H261180.0°179.5°
C25C26C27N280.1°0.4°
C26C25C24N280.1°0.3°
C25C26C27H271179.9°180.0°
C26C27N28H271180.0°179.6°
C27C26C25C01179.5°179.6°
C26C27N28C240.1°0.2°
C26C27N28H281179.9°179.7°
C27N28C24H281180.0°179.9°
N28C27C26H261179.9°179.9°
C25C01N02C2010.6°56.1°
C01C25C24N28179.6°179.8°
C01C25C26H2610.5°0.1°
N02C20H201H202119.0°120.1°
C20N02C03H03186.0°179.3°
C20N02C03H032154.6°60.7°
N02C20C19H191147.2°61.6°
N02C20C19H19293.8°178.4°
C06N18C17H171179.6°179.7°
C16C11C10H101171.5°29.9°
C16C11C10H10269.9°149.9°
C11C16C15H151179.7°179.7°
C16C11C12H121177.9°179.4°
C24N28C27H271179.9°179.8°
H131C13C12H1211.2°0.1°
H131C13C14H1410.3°0.2°
H151C15C14H1410.7°0.0°
H151C15C16H1610.3°0.2°
H201C20C19H19126.8°178.5°
H201C20C19H192145.9°58.5°
H202C20C19H19192.5°58.4°
H202C20C19H19226.5°61.6°
H261C26C27H2710.1°0.5°
H031C03C04H04128.0°61.7°
H031C03C04H04291.2°58.4°
H032C03C04H041147.4°58.3°
H032C03C04H04228.2°178.4°
H271C27N28H2810.1°0.1°

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PDB entries from 2026-07-22

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