A1JOG
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O2 | C7 | doub | 1.21Å | 1.25Å | |
| O3 | C7 | sing | 1.35Å | 1.25Å | |
| C7 | C3 | sing | 1.47Å | 1.51Å | |
| C3 | C2 | doub | 1.40Å | 1.38Å | Aromatic |
| C3 | C4 | sing | 1.40Å | 1.40Å | Aromatic |
| C2 | C1 | sing | 1.38Å | 1.40Å | Aromatic |
| C4 | C5 | doub | 1.38Å | 1.37Å | Aromatic |
| C1 | N1 | sing | 1.40Å | 1.39Å | |
| C1 | C6 | doub | 1.40Å | 1.40Å | Aromatic |
| C5 | C6 | sing | 1.39Å | 1.39Å | Aromatic |
| C6 | O1 | sing | 1.36Å | 1.35Å | |
| N1 | H1 | sing | 0.97Å | 1.00Å | |
| N1 | H2 | sing | 0.97Å | 1.00Å | |
| C2 | H3 | sing | 1.08Å | 1.08Å | |
| C4 | H4 | sing | 1.08Å | 1.08Å | |
| O1 | H5 | sing | 0.97Å | 0.95Å | |
| O3 | H6 | sing | 0.97Å | 0.95Å | |
| C5 | H7 | sing | 1.08Å | 1.08Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O2 | C7 | O3 | 124.2° | 120.0° |
| O2 | C7 | C3 | 118.3° | 120.0° |
| O3 | C7 | C3 | 117.6° | 119.9° |
| C7 | O3 | H6 | 109.5° | 116.9° |
| C7 | C3 | C2 | 120.0° | 120.0° |
| C7 | C3 | C4 | 120.0° | 120.1° |
| C2 | C3 | C4 | 119.9° | 119.9° |
| C3 | C2 | C1 | 119.9° | 119.8° |
| C3 | C2 | H3 | 120.1° | 120.1° |
| C3 | C4 | C5 | 121.1° | 120.0° |
| C3 | C4 | H4 | 119.5° | 120.0° |
| C2 | C1 | N1 | 121.9° | 120.0° |
| C2 | C1 | C6 | 119.5° | 120.0° |
| C1 | C2 | H3 | 120.1° | 120.1° |
| C4 | C5 | C6 | 119.4° | 120.2° |
| C5 | C4 | H4 | 119.4° | 120.0° |
| C4 | C5 | H7 | 120.3° | 119.9° |
| N1 | C1 | C6 | 118.6° | 120.0° |
| C1 | N1 | H1 | 109.5° | 120.0° |
| C1 | N1 | H2 | 109.5° | 120.0° |
| C1 | C6 | C5 | 120.2° | 120.1° |
| C1 | C6 | O1 | 117.2° | 120.0° |
| C5 | C6 | O1 | 122.5° | 119.9° |
| C6 | C5 | H7 | 120.3° | 119.9° |
| C6 | O1 | H5 | 109.5° | 114.0° |
| H1 | N1 | H2 | 109.5° | 120.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O2 | C7 | O3 | C3 | 179.1° | 180.0° |
| O2 | C7 | C3 | C2 | 10.0° | 0.0° |
| O2 | C7 | C3 | C4 | 169.2° | 180.0° |
| O2 | C7 | O3 | H6 | 0.0° | 0.0° |
| O3 | C7 | C3 | C2 | 170.9° | 180.0° |
| O3 | C7 | C3 | C4 | 9.9° | 0.0° |
| C7 | C3 | C2 | C4 | 179.2° | 180.0° |
| C7 | C3 | C2 | C1 | 179.4° | 180.0° |
| C7 | C3 | C4 | C5 | 179.1° | 180.0° |
| C7 | C3 | C2 | H3 | 0.6° | 0.0° |
| C7 | C3 | C4 | H4 | 0.9° | 0.0° |
| C3 | C7 | O3 | H6 | 179.1° | 180.0° |
| C3 | C2 | C1 | H3 | 180.0° | 179.9° |
| C2 | C3 | C4 | C5 | 0.1° | 0.0° |
| C3 | C2 | C1 | N1 | 179.7° | 180.0° |
| C3 | C2 | C1 | C6 | 0.3° | 0.3° |
| C2 | C3 | C4 | H4 | 179.9° | 180.0° |
| C4 | C3 | C2 | C1 | 0.2° | 0.0° |
| C3 | C4 | C5 | H4 | 180.0° | 180.0° |
| C3 | C4 | C5 | C6 | 0.3° | 0.3° |
| C4 | C3 | C2 | H3 | 179.8° | 179.9° |
| C3 | C4 | C5 | H7 | 179.7° | 179.9° |
| C2 | C1 | N1 | C6 | 180.0° | 179.7° |
| C2 | C1 | C6 | C5 | 0.0° | 0.6° |
| C2 | C1 | C6 | O1 | 179.7° | 179.8° |
| C2 | C1 | N1 | H1 | 180.0° | 179.8° |
| C2 | C1 | N1 | H2 | 60.0° | 0.0° |
| C4 | C5 | C6 | C1 | 0.3° | 0.6° |
| C4 | C5 | C6 | H7 | 180.0° | 179.8° |
| C4 | C5 | C6 | O1 | 179.4° | 179.8° |
| N1 | C1 | C6 | C5 | 179.9° | 179.7° |
| N1 | C1 | C6 | O1 | 0.3° | 0.0° |
| C1 | N1 | H1 | H2 | 120.0° | 179.8° |
| N1 | C1 | C2 | H3 | 0.3° | 0.1° |
| C1 | C6 | C5 | O1 | 179.6° | 179.7° |
| C6 | C1 | N1 | H1 | 0.0° | 0.0° |
| C6 | C1 | N1 | H2 | 120.0° | 179.8° |
| C6 | C1 | C2 | H3 | 179.7° | 179.8° |
| C1 | C6 | O1 | H5 | 180.0° | 90.0° |
| C1 | C6 | C5 | H7 | 179.7° | 179.7° |
| C6 | C5 | C4 | H4 | 179.6° | 179.7° |
| C5 | C6 | O1 | H5 | 0.3° | 89.7° |
| O1 | C6 | C5 | H7 | 0.6° | 0.0° |
| H4 | C4 | C5 | H7 | 0.4° | 0.1° |
