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A1JIQ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1N1sing1.47Å1.47Å
C2N1sing1.47Å1.48Å
C2C8sing1.54Å1.54Å
C8C4sing1.54Å1.53Å
C4CAAsing1.54Å1.53Å
C6N1sing1.35Å1.45Å
C6C5sing1.51Å1.54Å
C5CABsing1.53Å1.55Å
CABC9sing1.53Å1.54Å
C9C10sing1.53Å1.53Å
C10C11sing1.53Å1.54Å
C11C12sing1.53Å1.54Å
C12C13sing1.53Å1.54Å
CABO3'sing1.43Å1.45Å
C5S1sing1.81Å1.76Å
C1'S1sing1.81Å1.76Å
C1'C2'sing1.53Å1.53Å
C2'C16sing1.53Å1.53Å
C16N3sing1.47Å1.48Å
N3NAAsing1.29Å1.31ÅAromatic
NAAN2doub1.29Å1.32ÅAromatic
C17N2sing1.34Å1.35ÅAromatic
C17C18sing1.48Å1.48Å
C18C19doub1.39Å1.39ÅAromatic
C19C20sing1.38Å1.39ÅAromatic
C20F1sing1.35Å1.39Å
C18C21sing1.39Å1.39ÅAromatic
C21C22doub1.38Å1.38ÅAromatic
C22F2sing1.35Å1.39Å
C22C23sing1.39Å1.38ÅAromatic
C23F3sing1.35Å1.39Å
C17C24doub1.37Å1.38ÅAromatic
C2'O2'sing1.43Å1.43Å
C1'O4'sing1.43Å1.44Å
C4'O4'sing1.43Å1.44Å
C4'C26sing1.53Å1.51Å
C26OP3sing1.43Å1.42Å
C4'C5'sing1.53Å1.53Å
C5'O5'sing1.43Å1.44Å
C6O6doub1.21Å1.22Å
CAAC2sing1.54Å1.52Å
C13CABsing1.53Å1.55Å
C5'C16sing1.53Å1.54Å
C24N3sing1.35Å1.34ÅAromatic
C23C20doub1.39Å1.38ÅAromatic
C4H7sing1.09Å1.10Å
C4H8sing1.09Å1.10Å
C5H11sing1.09Å1.10Å
C8H5sing1.09Å1.10Å
C8H6sing1.09Å1.10Å
C10H14sing1.09Å1.10Å
C10H15sing1.09Å1.10Å
C13H20sing1.09Å1.10Å
C13H21sing1.09Å1.10Å
C21H27sing1.08Å1.08Å
C24H28sing1.08Å1.08Å
C26H31sing1.09Å1.10Å
C26H32sing1.09Å1.10Å
C1H1sing1.09Å1.10Å
C1H2sing1.09Å1.10Å
C1H3sing1.09Å1.10Å
C2H4sing1.09Å1.10Å
CAAH10sing1.09Å1.10Å
CAAH9sing1.09Å1.10Å
C9H12sing1.09Å1.10Å
C9H13sing1.09Å1.10Å
C11H16sing1.09Å1.10Å
C11H17sing1.09Å1.10Å
C12H18sing1.09Å1.10Å
C12H19sing1.09Å1.10Å
O3'H22sing0.97Å0.95Å
C1'H23sing1.09Å1.10Å
C2'H24sing1.09Å1.10Å
C16H25sing1.09Å1.10Å
C19H26sing1.08Å1.08Å
O2'H29sing0.97Å0.95Å
C4'H30sing1.09Å1.10Å
OP3H33sing0.97Å0.95Å
C5'H34sing1.09Å1.10Å
O5'H35sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1N1C2120.4°120.0°
C1N1C6119.3°120.0°
N1C1H1109.5°109.5°
N1C1H2109.5°109.4°
N1C1H3109.5°109.4°
N1C2C8117.5°113.6°
C2N1C6120.1°120.0°
N1C2CAA110.9°113.7°
N1C2H4112.8°112.9°
C2C8C489.3°87.1°
C8C2CAA89.7°87.0°
C2C8H5114.3°113.6°
C2C8H6114.3°113.6°
C8C2H4111.8°113.6°
C8C4CAA89.7°87.1°
C8C4H7114.2°113.7°
C8C4H8114.1°113.6°
C4C8H5114.3°113.7°
C4C8H6114.2°113.6°
C4CAAC290.0°87.1°
CAAC4H7114.2°113.6°
CAAC4H8114.2°113.6°
C4CAAH10114.1°113.6°
C4CAAH9114.1°113.7°
N1C6C5117.2°120.0°
N1C6O6119.7°120.0°
C6C5CAB114.8°109.5°
C6C5S1108.4°109.5°
C5C6O6119.6°120.0°
C6C5H11108.1°109.4°
C5CABC9110.6°109.4°
C5CABO3'108.3°109.5°
CABC5S1111.6°109.5°
C5CABC13112.2°109.5°
CABC5H11107.9°109.5°
CABC9C10112.5°109.5°
C9CABO3'107.9°109.5°
C9CABC13110.3°109.5°
CABC9H12108.7°109.4°
CABC9H13108.7°109.5°
C9C10C11111.9°109.5°
C9C10H14108.8°109.5°
C9C10H15108.8°109.4°
C10C9H12108.7°109.5°
C10C9H13108.7°109.4°
C10C11C12111.8°109.5°
C11C10H14108.9°109.5°
C11C10H15108.9°109.4°
C10C11H16108.9°109.4°
C10C11H17108.9°109.5°
C11C12C13111.4°109.5°
C12C11H16108.9°109.5°
C12C11H17108.9°109.5°
C11C12H18109.0°109.5°
C11C12H19109.0°109.5°
C12C13CAB111.8°109.5°
C12C13H20108.9°109.5°
C12C13H21108.9°109.4°
C13C12H18109.0°109.4°
C13C12H19109.0°109.5°
O3'CABC13107.3°109.5°
CABO3'H22109.5°114.0°
C5S1C1'101.0°103.0°
S1C5H11105.7°109.5°
S1C1'C2'110.2°109.5°
S1C1'O4'107.2°109.5°
S1C1'H23107.2°109.5°
C1'C2'C16109.8°109.2°
C1'C2'O2'109.0°109.5°
C2'C1'O4'111.2°109.4°
C2'C1'H23109.8°109.5°
C1'C2'H24109.4°109.6°
C2'C16N3110.9°109.5°
C16C2'O2'108.2°109.5°
C2'C16C5'109.9°109.1°
C16C2'H24109.5°109.5°
C2'C16H25108.6°109.5°
C16N3NAA116.4°125.7°
N3C16C5'109.5°109.5°
C16N3C24131.7°125.8°
N3C16H25109.3°109.5°
N3NAAN2107.9°110.4°
NAAN3C24111.7°108.5°
NAAN2C17108.2°108.9°
N2C17C18124.6°126.9°
N2C17C24108.3°106.2°
C17C18C19119.3°120.1°
C17C18C21119.4°120.1°
C18C17C24127.1°126.9°
C18C19C20118.5°120.0°
C19C18C21121.1°119.9°
C18C19H26120.7°120.0°
C19C20F1121.4°120.0°
C19C20C23120.6°120.1°
C20C19H26120.7°120.0°
F1C20C23118.0°120.0°
C18C21C22119.3°119.9°
C18C21H27120.3°120.0°
C21C22F2120.3°119.9°
C21C22C23120.1°120.1°
C22C21H27120.3°120.1°
F2C22C23119.6°119.9°
C22C23F3121.0°119.9°
C22C23C20120.3°120.1°
F3C23C20118.6°119.9°
C17C24N3103.9°106.1°
C17C24H28128.1°127.0°
O2'C2'H24110.9°109.5°
C2'O2'H29109.5°114.0°
C1'O4'C4'114.9°114.1°
O4'C1'H23111.2°109.5°
O4'C4'C26108.8°109.5°
O4'C4'C5'109.0°109.4°
O4'C4'H30109.7°109.4°
C4'C26OP3107.5°109.5°
C26C4'C5'112.1°109.5°
C4'C26H31110.0°109.5°
C4'C26H32109.9°109.5°
C26C4'H30108.7°109.5°
OP3C26H31110.0°109.4°
OP3C26H32110.0°109.4°
C26OP3H33109.5°114.1°
C4'C5'O5'109.1°109.5°
C4'C5'C16110.0°109.2°
C5'C4'H30108.5°109.5°
C4'C5'H34109.0°109.5°
O5'C5'C16109.7°109.5°
O5'C5'H34110.1°109.5°
C5'O5'H35109.5°114.0°
CAAC2H4112.1°113.7°
C2CAAH10114.1°113.6°
C2CAAH9114.1°113.6°
CABC13H20108.9°109.5°
CABC13H21108.9°109.5°
C5'C16H25108.5°109.7°
C16C5'H34108.8°109.6°
N3C24H28128.0°127.0°
H7C4H8109.5°112.9°
H5C8H6109.5°112.9°
H14C10H15109.5°109.4°
H20C13H21109.5°109.4°
H31C26H32109.5°109.4°
H1C1H2109.5°109.5°
H1C1H3109.5°109.5°
H2C1H3109.5°109.4°
H10CAAH9109.5°112.9°
H12C9H13109.5°109.5°
H16C11H17109.4°109.4°
H18C12H19109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1N1C2C6176.2°179.7°
C1N1C2C829.0°60.3°
C1N1C6C5175.7°0.0°
C1N1C6O616.8°180.0°
C1N1C2CAA72.2°37.1°
N1C1H1H2120.0°120.0°
N1C1H1H3120.0°120.0°
N1C1H2H3120.0°119.9°
C1N1C2H4161.2°168.6°
N1C2C8CAA113.6°114.6°
N1C2C8H4132.7°130.8°
N1C2C8C4122.2°140.1°
N1C2CAAC4128.1°140.0°
C2N1C6C50.5°179.7°
C2N1C6O6159.5°0.3°
N1C2CAAH4127.0°131.0°
N1C2C8H5121.4°25.4°
N1C2C8H65.7°105.5°
C2N1C1H1180.0°89.6°
C2N1C1H260.0°30.3°
C2N1C1H360.0°150.3°
N1C2CAAH10115.4°105.5°
N1C2CAAH911.5°25.4°
C2C8C4H5116.4°114.6°
C2C8C4H6116.4°114.6°
C8C2CAAC48.6°25.5°
C8C2N1C6147.2°120.0°
C8C2CAAH4113.5°114.5°
C2C8C4H7108.0°89.1°
C2C8C4H8125.1°140.0°
C2C8H5H6129.6°131.3°
C8C2CAAH10125.2°140.1°
C8C2CAAH9108.0°89.1°
C8C4CAAH7116.5°114.6°
C8C4CAAH8116.5°114.5°
C8C4H7H8129.3°131.3°
C4C8H5H6129.5°131.2°
C4C8C2H4105.2°89.2°
C8C4CAAH10125.2°140.0°
C8C4CAAH9107.9°89.0°
C4CAAC2H10116.6°114.6°
C4CAAC2H9116.6°114.6°
CAAC4H7H8129.4°131.2°
CAAC4C8H5125.0°89.1°
CAAC4C8H6107.9°140.0°
C4CAAC2H4104.9°89.0°
C4CAAH10H9129.2°131.4°
N1C6C5O6159.0°180.0°
N1C6C5CAB97.7°80.0°
N1C6C5S1136.8°160.0°
C6N1C2CAA111.7°142.5°
N1C6C5H1122.8°40.0°
C6N1C1H13.8°90.0°
C6N1C1H2123.8°150.0°
C6N1C1H3116.2°30.1°
C6N1C2H415.0°11.1°
C6C5CABS1123.8°120.0°
C6C5CABH11120.5°119.9°
C6C5CABC948.0°58.6°
C6C5CABO3'166.1°61.4°
C6C5S1H11115.6°119.9°
C6C5S1C1'88.4°66.8°
C6C5CABC1375.7°178.6°
C5CABC9O3'118.3°120.0°
C5CABC9C13124.8°120.0°
C5CABC9C10179.0°179.9°
C5CABC13C12179.0°180.0°
C5CABO3'C13121.3°120.0°
CABC5S1H11117.0°120.0°
CABC5S1C1'144.2°173.2°
CABC5C6O661.3°100.0°
C5CABC13H2058.7°60.1°
C5CABC13H2160.7°59.9°
C5CABC9H1258.6°60.0°
C5CABC9H1360.5°60.0°
C5CABO3'H22180.0°180.0°
CABC9C10H12120.4°120.0°
CABC9C10H13120.5°120.0°
CABC9C10C1153.8°59.9°
C9CABC13C1255.1°60.0°
C9CABO3'C13118.9°120.0°
C9CABC5S1171.8°61.4°
C9CABC5H1172.5°178.6°
CABC9C10H14174.1°180.0°
CABC9C10H1566.6°60.0°
C9CABC13H2065.2°180.0°
C9CABC13H21175.5°60.0°
CABC9H12H13118.7°120.0°
C9CABO3'H2260.2°60.0°
C9C10C11H14120.4°120.1°
C9C10C11H15120.4°119.9°
C9C10C11C1253.2°60.0°
C10C9CABO3'62.7°60.0°
C10C9CABC1354.2°60.0°
C9C10H14H15118.8°120.0°
C10C9H12H13118.6°120.0°
C9C10C11H1667.2°60.1°
C9C10C11H17173.5°180.0°
C10C11C12H16120.4°120.0°
C10C11C12H17120.4°120.1°
C10C11C12C1354.1°59.9°
C11C10H14H15118.9°120.0°
C11C10C9H1266.7°179.9°
C11C10C9H13174.2°60.0°
C10C11H16H17119.0°120.0°
C10C11C12H18174.4°60.0°
C10C11C12H1966.2°180.0°
C11C12C13H18120.3°120.0°
C11C12C13H19120.3°120.1°
C11C12C13CAB55.5°60.0°
C12C11C10H14173.5°180.0°
C12C11C10H1567.2°60.0°
C11C12C13H2064.8°180.0°
C11C12C13H21175.9°60.1°
C12C11H16H17118.9°120.0°
C11C12H18H19119.1°120.0°
C12C13CABO3'62.2°60.0°
C12C13CABH20120.3°120.0°
C12C13CABH21120.3°120.0°
C12C13H20H21118.9°119.9°
C13C12C11H1666.3°60.0°
C13C12C11H17174.5°180.0°
C13C12H18H19119.1°120.0°
O3'CABC5S170.1°178.6°
O3'CABC5H1145.6°58.5°
O3'CABC13H20177.5°60.0°
O3'CABC13H2158.2°180.0°
O3'CABC9H12176.9°60.0°
O3'CABC9H1357.8°180.0°
C5S1C1'C2'176.9°176.5°
C5S1C1'O4'55.8°63.6°
S1C5C6O664.2°20.0°
S1C5CABC1348.1°58.6°
C5S1C1'H2363.7°56.5°
S1C1'C2'O4'118.7°119.9°
S1C1'C2'H23117.9°120.1°
S1C1'C2'C16172.6°177.6°
S1C1'C2'O2'69.0°62.5°
S1C1'O4'H23116.9°120.1°
S1C1'O4'C4'178.3°178.9°
C1'S1C5H1127.2°53.1°
S1C1'C2'H2452.4°57.6°
C1'C2'C16O2'118.9°119.9°
C1'C2'C16H24120.1°120.0°
C1'C2'C16N3175.8°176.9°
C1'C2'O2'H24120.5°120.2°
C2'C1'O4'H23122.6°120.0°
C2'C1'O4'C4'57.8°61.2°
C1'C2'C16C5'54.5°57.0°
C1'C2'C16H2564.1°63.0°
C1'C2'O2'H29180.0°60.0°
C2'C16N3C5'121.5°119.6°
C2'C16N3H25119.7°120.1°
C2'C16N3NAA126.5°145.0°
C16C2'O2'H24120.1°120.1°
C16C2'C1'O4'53.9°57.7°
C2'C16C5'C4'57.0°57.0°
C2'C16C5'O5'63.0°62.9°
C2'C16C5'H25118.7°119.9°
C2'C16N3C2458.6°34.7°
C16C2'C1'H2369.5°62.3°
C16C2'O2'H2960.6°179.6°
C2'C16C5'H34176.4°176.9°
C16N3NAAC24175.9°179.7°
C16N3NAAN2176.7°179.8°
C16N3C24C17175.9°179.8°
N3C16C2'O2'65.4°63.2°
N3C16C5'C4'179.1°176.9°
N3C16C5'O5'59.1°57.0°
N3C16C5'H25119.2°120.2°
C16N3C24H284.1°0.3°
N3C16C2'H2455.6°56.9°
N3C16C5'H3461.5°63.3°
N3NAAN2C170.4°0.0°
NAAN3C24C170.9°0.1°
NAAN3C16C5'112.0°95.5°
NAAN3C24H28179.1°180.0°
NAAN3C16H256.7°24.8°
NAAN2C17C18178.4°180.0°
NAAN2C17C240.2°0.0°
N2NAAN3C240.8°0.0°
N2C17C18C24177.9°179.9°
N2C17C18C1915.4°0.0°
N2C17C18C21159.6°179.9°
N2C17C24N30.6°0.1°
N2C17C24H28179.4°180.0°
C17C18C19C21174.9°179.9°
C17C18C19C20175.5°180.0°
C17C18C21C22177.2°179.8°
C18C17C24N3178.8°180.0°
C17C18C21H272.8°0.4°
C18C17C24H281.2°0.1°
C17C18C19H264.5°0.1°
C18C19C20H26180.0°179.9°
C18C19C20F1178.7°180.0°
C19C18C21C222.3°0.1°
C19C18C17C24166.7°179.9°
C18C19C20C232.4°0.4°
C19C18C21H27177.7°179.7°
C19C20F1C23176.4°179.6°
C20C19C18C210.6°0.1°
C19C20C23C223.6°0.4°
C19C20C23F3179.9°179.7°
F1C20C23C22179.9°180.0°
F1C20C23F33.6°0.1°
F1C20C19H261.3°0.1°
C18C21C22H27180.0°179.9°
C18C21C22F2179.1°180.0°
C18C21C22C231.1°0.1°
C21C18C17C2418.3°0.0°
C21C18C19H26179.4°180.0°
C21C22F2C23178.0°179.8°
C21C22C23F3178.0°180.0°
C21C22C23C201.8°0.1°
F2C22C23F30.0°0.2°
F2C22C23C20176.2°179.7°
F2C22C21H270.9°0.1°
C22C23F3C20176.2°179.9°
C23C22C21H27178.9°179.7°
C17C24N3H28180.0°180.0°
O2'C2'C1'O4'172.3°177.6°
O2'C2'C16C5'173.4°176.9°
O2'C2'C1'H2348.9°57.6°
O2'C2'C16H2554.8°56.9°
C1'O4'C4'C26178.3°178.8°
C1'O4'C4'C5'59.1°61.2°
O4'C1'C2'H2466.3°62.3°
C1'O4'C4'H3059.6°58.8°
O4'C4'C26C5'120.7°119.9°
O4'C4'C26H30119.4°120.0°
O4'C4'C26OP360.8°64.1°
O4'C4'C5'H30119.4°119.9°
O4'C4'C5'O5'63.0°62.3°
O4'C4'C5'C1657.4°57.6°
O4'C4'C26H31179.5°175.9°
O4'C4'C26H3258.9°55.9°
C4'O4'C1'H2364.8°58.8°
O4'C4'C5'H34176.7°177.6°
C4'C26OP3H31119.7°120.0°
C4'C26OP3H32119.7°120.0°
C26C4'C5'H30120.1°120.1°
C26C4'C5'O5'57.5°57.7°
C26C4'C5'C16178.0°177.6°
C4'C26H31H32120.9°120.0°
C4'C26OP3H33180.0°175.0°
C26C4'C5'H3462.8°62.5°
OP3C26C4'C5'178.6°176.0°
OP3C26H31H32120.9°119.9°
OP3C26C4'H3058.6°55.9°
C4'C5'O5'C16120.6°119.7°
C4'C5'O5'H34119.6°120.1°
C4'C5'C16H34119.3°119.9°
C5'C4'C26H3158.8°56.0°
C5'C4'C26H3261.8°64.0°
C4'C5'C16H2561.6°62.9°
C4'C5'O5'H35180.0°60.0°
O5'C5'C16H34120.6°120.2°
O5'C5'C16H25178.3°177.2°
O5'C5'C4'H30177.6°177.7°
O6C6C5H11178.2°140.0°
C2CAAC4H7107.9°89.1°
C2CAAC4H8125.1°140.0°
CAAC2C8H5125.0°89.1°
CAAC2C8H6107.8°140.0°
C2CAAH10H9129.2°131.1°
C13CABC5H11163.8°61.5°
CABC13H20H21118.9°120.0°
C13CABC9H1266.2°180.0°
C13CABC9H13174.7°60.0°
CABC13C12H18175.8°60.0°
CABC13C12H1964.8°180.0°
C13CABO3'H2258.6°60.0°
C5'C16N3C2462.9°84.9°
C5'C16C2'H2465.6°62.9°
C16C5'C4'H3062.0°62.3°
C16C5'O5'H3559.4°179.7°
C24N3C16H25178.4°154.8°
C23C20C19H26177.6°179.7°
H7C4C8H58.5°156.3°
H7C4C8H6135.6°25.5°
H7C4CAAH108.7°25.4°
H7C4CAAH9135.6°156.4°
H8C4C8H5118.5°25.4°
H8C4C8H68.6°105.4°
H8C4CAAH10118.3°105.5°
H8C4CAAH98.6°25.5°
H5C8C2H411.3°156.2°
H6C8C2H4138.4°25.3°
H14C10C9H1253.7°60.0°
H14C10C9H1365.4°60.1°
H14C10C11H1653.1°60.0°
H14C10C11H1766.1°59.9°
H15C10C9H12173.0°60.0°
H15C10C9H1353.9°179.9°
H15C10C11H16172.4°180.0°
H15C10C11H1753.1°60.1°
H20C13C12H1855.5°60.0°
H20C13C12H19174.9°60.0°
H21C13C12H1863.8°179.9°
H21C13C12H1955.6°60.0°
H31C26C4'H3061.1°64.1°
H31C26OP3H3360.3°64.9°
H32C26C4'H30178.3°175.9°
H32C26OP3H3360.3°55.0°
H1C1H2H3120.0°120.1°
H4C2CAAH1011.6°25.5°
H4C2CAAH9138.5°156.3°
H16C11C12H1854.0°180.0°
H16C11C12H19173.5°60.0°
H17C11C12H1865.2°60.1°
H17C11C12H1954.2°59.9°
H23C1'C2'H24170.3°177.7°
H24C2'C16H25175.8°177.0°
H24C2'O2'H2959.5°60.2°
H25C16C5'H3457.7°56.9°
H30C4'C5'H3457.3°57.6°
H34C5'O5'H3560.4°60.0°

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PDB entries from 2026-07-22

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