Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

A1JDH

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O2C8doub1.21Å1.21Å
C8C9sing1.52Å1.50Å
C8C7sing1.51Å1.49Å
C9C10sing1.53Å1.50Å
C7C6sing1.51Å1.50Å
C10C11sing1.51Å1.50Å
C6C11doub1.37Å1.39ÅAromatic
C6C5sing1.39Å1.39ÅAromatic
C11C2sing1.40Å1.40ÅAromatic
C5C4doub1.38Å1.39ÅAromatic
C2O1sing1.36Å1.37Å
C2C3doub1.38Å1.39ÅAromatic
O1C1sing1.43Å1.43Å
C4C3sing1.38Å1.38ÅAromatic
C1H1sing1.09Å1.10Å
C1H2sing1.09Å1.10Å
C1H3sing1.09Å1.10Å
C3H4sing1.08Å1.08Å
C4H5sing1.08Å1.08Å
C5H6sing1.08Å1.08Å
C7H7sing1.09Å1.10Å
C7H8sing1.09Å1.10Å
C9H9sing1.09Å1.10Å
C9H10sing1.09Å1.10Å
C10H11sing1.09Å1.10Å
C10H12sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O2C8C9121.9°121.6°
O2C8C7121.2°121.6°
C9C8C7116.9°116.8°
C8C9C10113.7°107.6°
C8C9H9108.4°109.8°
C8C9H10108.4°109.8°
C8C7C6115.8°109.6°
C8C7H7107.9°109.5°
C8C7H8107.9°109.4°
C9C10C11113.2°111.4°
C10C9H9108.4°109.8°
C10C9H10108.4°109.8°
C9C10H11108.5°109.1°
C9C10H12108.6°109.1°
C7C6C11121.7°122.9°
C7C6C5119.1°117.2°
C6C7H7107.9°109.5°
C6C7H8107.9°109.5°
C10C11C6121.7°123.7°
C10C11C2118.9°117.0°
C11C10H11108.6°109.1°
C11C10H12108.5°109.1°
C11C6C5119.1°119.8°
C6C11C2119.4°119.3°
C6C5C4120.8°120.8°
C6C5H6119.6°119.6°
C11C2O1114.8°119.6°
C11C2C3121.1°120.7°
C5C4C3120.5°119.7°
C5C4H5119.8°120.2°
C4C5H6119.6°119.7°
O1C2C3124.1°119.7°
C2O1C1118.5°117.0°
C2C3C4119.1°119.7°
C2C3H4120.5°120.2°
O1C1H1109.5°109.5°
O1C1H2109.5°109.5°
O1C1H3109.5°109.4°
C4C3H4120.4°120.1°
C3C4H5119.7°120.1°
H1C1H2109.5°109.5°
H1C1H3109.4°109.5°
H2C1H3109.5°109.5°
H7C7H8109.5°109.4°
H9C9H10109.5°109.9°
H11C10H12109.4°109.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O2C8C9C7177.0°180.0°
O2C8C9C10136.3°117.8°
O2C8C7C6157.8°137.7°
O2C8C7H736.9°102.2°
O2C8C7H881.3°17.7°
O2C8C9H9103.1°122.7°
O2C8C9H1015.7°1.7°
C8C9C10H9120.6°119.5°
C8C9C10H10120.6°119.5°
C9C8C7C625.2°42.3°
C8C9C10C1144.1°47.7°
C9C8C7H7146.1°77.8°
C9C8C7H895.7°162.4°
C8C9H9H10118.1°121.0°
C8C9C10H11164.7°168.2°
C8C9C10H1276.4°72.8°
C7C8C9C1046.7°62.3°
C8C7C6H7120.9°120.0°
C8C7C6H8120.9°120.0°
C8C7C6C112.7°11.0°
C8C7C6C5177.8°169.4°
C8C7H7H8117.1°119.9°
C7C8C9H973.9°57.3°
C7C8C9H10167.3°178.3°
C9C10C11H11120.6°120.5°
C9C10C11H12120.6°120.5°
C9C10C11C623.0°21.6°
C9C10C11C2159.2°158.7°
C10C9H9H10118.1°120.9°
C9C10H11H12118.3°119.1°
C7C6C11C102.1°2.1°
C7C6C11C5179.5°179.6°
C7C6C11C2179.9°178.3°
C7C6C5C4180.0°178.8°
C7C6C5H60.0°1.2°
C6C7H7H8117.1°120.0°
C10C11C6C2177.8°179.7°
C10C11C6C5178.4°178.3°
C10C11C2O11.4°1.0°
C10C11C2C3178.1°178.6°
C11C10C9H976.5°71.8°
C11C10C9H10164.8°167.2°
C11C10H11H12118.3°119.1°
C11C6C5C40.5°0.8°
C6C11C2O1179.3°179.2°
C6C11C2C30.2°1.1°
C11C6C5H6179.6°179.1°
C11C6C7H7123.6°109.0°
C11C6C7H8118.2°131.0°
C6C11C10H11143.5°142.0°
C6C11C10H1297.6°98.9°
C5C6C11C20.6°1.4°
C6C5C4H6180.0°179.9°
C6C5C4C30.1°0.1°
C6C5C4H5179.9°180.0°
C5C6C7H756.9°70.6°
C5C6C7H861.3°49.3°
C11C2O1C3179.5°179.7°
C11C2O1C1171.6°179.7°
C11C2C3C40.4°0.3°
C11C2C3H4179.6°179.7°
C2C11C10H1138.6°38.3°
C2C11C10H1280.2°80.8°
C5C4C3C20.6°0.3°
C5C4C3H5180.0°179.9°
C5C4C3H4179.4°179.7°
O1C2C3C4179.8°179.9°
C2O1C1H1180.0°180.0°
C2O1C1H260.0°60.0°
C2O1C1H360.0°60.0°
O1C2C3H40.2°0.1°
C3C2O1C17.9°0.0°
C2C3C4H4180.0°180.0°
C2C3C4H5179.5°179.8°
O1C1H1H2120.0°120.0°
O1C1H1H3120.0°120.0°
O1C1H2H3120.0°119.9°
C3C4C5H6179.9°180.0°
H1C1H2H3119.9°120.0°
H4C3C4H50.5°0.2°
H5C4C5H60.1°0.1°
H9C9C10H1144.1°48.7°
H9C9C10H12162.9°167.7°
H10C9C10H1174.7°72.3°
H10C9C10H1244.2°46.7°

248335

PDB entries from 2026-01-28

PDB statisticsPDBj update infoContact PDBjnumon