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SummaryGeometryRelated PDB entries

A1JCV

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
O06C05sing1.43Å1.42Å
O04C03sing1.43Å1.44Å
C05C03sing1.53Å1.52Å
C05C07sing1.53Å1.55Å
C03C02sing1.53Å1.52Å
C07N08sing1.47Å1.47Å
C02O01sing1.43Å1.37Å
C02C09sing1.53Å1.55Å
N08C09sing1.47Å1.48Å
C09C10sing1.53Å1.54Å
C10O11sing1.43Å1.41Å
O11P12sing1.61Å1.71Å
O14P12doub1.48Å1.46Å
P12O13sing1.61Å1.44Å
P12O15sing1.61Å1.45Å
C10H1sing1.09Å1.10Å
C10H2sing1.09Å1.10Å
O13H3sing0.97Å0.95Å
O15H4sing0.97Å0.95Å
C09H5sing1.09Å1.10Å
N08H6sing1.01Å1.00Å
C07H8sing1.09Å1.10Å
C07H9sing1.09Å1.10Å
C05H10sing1.09Å1.10Å
O06H11sing0.97Å0.95Å
C03H12sing1.09Å1.10Å
O04H13sing0.97Å0.95Å
C02H14sing1.09Å1.10Å
O01H15sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
O06C05C03110.5°109.5°
O06C05C07109.2°109.5°
O06C05H10110.8°109.5°
C05O06H11109.5°114.1°
O04C03C05115.5°109.5°
O04C03C02104.7°109.5°
O04C03H12111.3°109.6°
C03O04H13109.5°114.0°
C03C05C07108.0°109.2°
C05C03C02104.8°109.2°
C03C05H10109.4°109.5°
C05C03H12110.0°109.5°
C05C07N08109.3°109.5°
C05C07H8109.5°109.4°
C05C07H9109.5°109.4°
C07C05H10108.9°109.5°
C03C02O01102.2°109.5°
C03C02C09111.6°109.3°
C02C03H12110.1°109.5°
C03C02H14107.8°109.5°
C07N08C09110.0°111.2°
C07N08H6109.3°111.0°
N08C07H8109.5°109.5°
N08C07H9109.5°109.5°
O01C02C09117.7°109.5°
O01C02H14109.9°109.5°
C02O01H15109.5°114.0°
C02C09N08110.4°109.5°
C02C09C10110.8°109.5°
C02C09H5107.8°109.5°
C09C02H14107.3°109.5°
N08C09C10111.3°109.5°
N08C09H5108.6°109.4°
C09N08H6109.3°111.0°
C09C10O11111.6°109.5°
C09C10H1108.9°109.4°
C09C10H2109.0°109.4°
C10C09H5108.0°109.4°
C10O11P12121.6°123.0°
O11C10H1109.0°109.5°
O11C10H2108.9°109.5°
O11P12O1495.8°109.5°
O11P12O13101.2°109.5°
O11P12O15102.7°109.4°
O14P12O13118.6°109.5°
O14P12O15117.7°109.5°
O13P12O15115.0°109.4°
P12O13H3109.5°114.1°
P12O15H4109.5°114.1°
H1C10H2109.4°109.5°
H8C07H9109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
O06C05C03O0461.9°62.5°
O06C05C03C07119.4°119.9°
O06C05C03H10122.2°120.1°
O06C05C07H10121.1°120.1°
O06C05C03C02176.5°177.6°
O06C05C07N08173.3°179.1°
O06C05C07H853.3°59.1°
O06C05C07H966.7°60.9°
O06C05C03H1265.1°57.6°
O04C03C05C02114.7°119.9°
O04C03C05H12127.0°120.2°
O04C03C05C07178.8°177.6°
O04C03C02H12119.7°120.2°
O04C03C02O0150.7°62.5°
O04C03C02C09177.4°177.6°
O04C03C05H1060.3°57.6°
O04C03C02H1465.0°57.6°
C03C05C07H10118.7°119.9°
C05C03C02H12118.3°119.9°
C03C05C07N0866.5°59.2°
C05C03C02O01172.7°177.6°
C05C03C02C0960.6°57.7°
C03C05C07H8173.5°60.8°
C03C05C07H953.5°179.2°
C03C05O06H11180.0°180.0°
C05C03O04H13180.0°60.0°
C05C03C02H1457.0°62.3°
C07C05C03C0264.1°57.7°
C05C07N08H8120.0°120.0°
C05C07N08H9120.0°120.0°
C05C07N08C0960.9°61.7°
C05C07N08H659.1°62.3°
C05C07H8H9120.1°119.9°
C07C05O06H1161.4°60.2°
C07C05C03H1254.2°62.3°
C03C02O01C09122.6°119.8°
C03C02O01H14114.2°120.1°
C03C02C09H14117.9°119.9°
C03C02C09N0857.3°59.2°
C03C02C09C10179.1°179.2°
C03C02C09H561.2°60.8°
C02C03C05H1054.3°62.3°
C02C03O04H1365.3°179.7°
C03C02O01H15180.0°60.0°
C07N08C09C0255.9°61.7°
C07N08C09H6120.1°124.1°
C07N08C09C10179.2°178.2°
C07N08C09H562.1°58.3°
N08C07H8H9120.1°120.0°
N08C07C05H1052.2°60.7°
O01C02C09H14124.5°120.1°
O01C02C09N08175.0°179.1°
O01C02C09C1061.4°60.9°
O01C02C09H556.5°59.1°
O01C02C03H1269.0°57.7°
C02C09N08C10123.4°120.0°
C02C09N08H5117.9°120.0°
C02C09C10H5117.8°120.0°
C02C09C10O1178.0°175.0°
C02C09C10H1161.6°65.0°
C02C09C10H242.3°55.0°
C02C09N08H664.2°62.4°
C09C02C03H1257.7°62.3°
C09C02O01H1557.4°179.8°
N08C09C10H5119.1°119.9°
N08C09C10O1145.1°65.0°
N08C09C10H175.2°55.0°
N08C09C10H2165.4°175.0°
C09N08C07H8179.1°58.3°
C09N08C07H959.0°178.3°
N08C09C02H1460.6°60.8°
C09C10O11H1120.3°120.0°
C09C10O11H2120.3°120.0°
C09C10O11P12174.0°180.0°
C09C10H1H2119.1°120.0°
C10C09N08H659.1°57.7°
C10C09C02H1463.1°59.3°
C10O11P12O14167.5°54.9°
C10O11P12O1346.8°175.0°
C10O11P12O1572.3°65.1°
O11C10H1H2119.0°120.0°
O11C10C09H5164.2°55.0°
O11P12O14O13106.1°120.0°
O11P12O14O15107.7°120.0°
O11P12O13O15109.9°120.0°
P12O11C10H165.7°60.0°
P12O11C10H253.6°60.1°
O11P12O13H3103.0°179.9°
O11P12O15H4103.6°60.0°
O14P12O13O15147.1°120.0°
O14P12O13H30.0°60.0°
O14P12O15H40.0°180.0°
O13P12O15H4147.4°60.0°
O15P12O13H3147.1°60.0°
H1C10C09H543.8°175.0°
H2C10C09H575.5°65.0°
H5C09N08H6177.8°177.6°
H5C09C02H14179.0°179.2°
H6N08C07H860.9°177.6°
H6N08C07H9179.1°57.7°
H8C07C05H1067.8°179.2°
H9C07C05H10172.2°59.3°
H10C05O06H1158.6°59.9°
H10C05C03H12172.7°177.8°
H12C03O04H1353.6°60.2°
H12C03C02H14175.3°177.8°
H14C02O01H1565.8°60.1°

253795

PDB entries from 2026-05-20

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