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SummaryGeometryRelated PDB entries

A1JAC

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
N12N11sing1.28Å1.37ÅAromatic
N12N13doub1.29Å1.32ÅAromatic
N11C10doub1.31Å1.39ÅAromatic
N13N14sing1.41Å1.40ÅAromatic
C10N14sing1.35Å1.39ÅAromatic
C10N09sing1.39Å1.40Å
N14C15sing1.47Å1.45Å
O08C07doub1.22Å1.24Å
N09C07sing1.35Å1.41Å
C07C05sing1.47Å1.46Å
C05C04doub1.36Å1.39ÅAromatic
C05S06sing1.76Å1.70ÅAromatic
C04N03sing1.31Å1.44ÅAromatic
S06C02sing1.71Å1.80ÅAromatic
N03C02doub1.29Å1.33ÅAromatic
C02C01sing1.51Å1.52Å
C15H1sing1.09Å1.10Å
C15H2sing1.09Å1.10Å
C15H3sing1.09Å1.10Å
C01H4sing1.09Å1.10Å
C01H5sing1.09Å1.10Å
C01H6sing1.09Å1.10Å
C04H7sing1.08Å1.08Å
N09H8sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
N11N12N13111.9°110.3°
N12N11C10106.8°110.5°
N12N13N14106.6°106.8°
N11C10N14106.5°107.1°
N11C10N09130.7°126.4°
N13N14C10108.3°105.3°
N13N14C15121.3°127.4°
N14C10N09122.8°126.5°
C10N14C15130.5°127.3°
C10N09C07126.4°120.0°
C10N09H8116.8°120.0°
N14C15H1109.5°109.4°
N14C15H2109.4°109.5°
N14C15H3109.5°109.5°
O08C07N09117.6°120.0°
O08C07C05122.1°120.0°
N09C07C05120.3°120.1°
C07N09H8116.8°120.0°
C07C05C04128.6°126.2°
C07C05S06122.1°126.1°
C04C05S06109.2°107.7°
C05C04N03116.1°114.2°
C05C04H7122.0°123.0°
C05S06C0292.0°90.3°
C04N03C02111.0°117.4°
N03C04H7122.0°122.9°
S06C02N03111.8°110.4°
S06C02C01118.3°124.8°
N03C02C01129.9°124.8°
C02C01H4109.5°109.5°
C02C01H5109.5°109.4°
C02C01H6109.5°109.5°
H1C15H2109.4°109.5°
H1C15H3109.5°109.5°
H2C15H3109.5°109.5°
H4C01H5109.5°109.4°
H4C01H6109.5°109.5°
H5C01H6109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
N11N12N13N140.0°0.5°
N12N11C10N140.8°0.0°
N12N11C10N09178.8°179.7°
N13N12N11C100.5°0.3°
N12N13N14C100.5°0.4°
N12N13N14C15179.9°179.6°
N11C10N14N130.8°0.3°
N11C10N14N09178.2°179.7°
N11C10N14C15179.9°179.7°
N11C10N09C0726.0°0.4°
N11C10N09H8154.0°179.7°
N13N14C10C15179.3°180.0°
N13N14C10N09179.0°180.0°
N13N14C15H10.0°90.0°
N13N14C15H2120.0°30.0°
N13N14C15H3120.0°150.0°
N14C10N09C07156.3°180.0°
C10N14C15H1179.2°90.0°
C10N14C15H259.2°150.0°
C10N14C15H360.8°30.0°
N14C10N09H823.7°0.1°
N09C10N14C151.7°0.0°
C10N09C07O080.0°0.1°
C10N09C07H8180.0°179.9°
C10N09C07C05177.5°180.0°
N14C15H1H2120.0°120.0°
N14C15H1H3120.0°119.9°
N14C15H2H3120.0°120.0°
O08C07N09C05177.5°179.9°
O08C07C05C0411.5°0.1°
O08C07C05S06172.1°179.8°
O08C07N09H8180.0°180.0°
N09C07C05C04166.0°180.0°
N09C07C05S0610.5°0.1°
C07C05C04S06176.8°179.9°
C07C05C04N03177.7°180.0°
C07C05S06C02177.8°179.9°
C07C05C04H72.3°0.1°
C05C07N09H82.4°0.1°
C05C04N03H7180.0°179.9°
C04C05S06C020.7°0.3°
C05C04N03C020.6°0.1°
S06C05C04N030.9°0.1°
C05S06C02N030.4°0.3°
C05S06C02C01179.1°180.0°
S06C05C04H7179.1°179.8°
C04N03C02S060.0°0.3°
C04N03C02C01179.5°180.0°
S06C02N03C01179.5°179.6°
S06C02C01H40.0°90.3°
S06C02C01H5120.0°29.7°
S06C02C01H6120.0°149.7°
N03C02C01H4179.5°90.1°
N03C02C01H559.5°149.9°
N03C02C01H660.5°29.9°
C02N03C04H7179.5°180.0°
C02C01H4H5120.0°119.9°
C02C01H4H6120.0°120.0°
C02C01H5H6120.0°120.0°
H1C15H2H3120.0°120.0°
H4C01H5H6120.0°120.1°

255900

PDB entries from 2026-07-01

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