Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

A1IY5

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2doub1.38Å1.37ÅAromatic
C1Csing1.38Å1.38ÅAromatic
C2C3sing1.38Å1.41ÅAromatic
CC5doub1.38Å1.40ÅAromatic
C3C4doub1.38Å1.38ÅAromatic
C17C18sing1.53Å1.51Å
C17C16sing1.51Å1.53Å
C18C19sing1.53Å1.48Å
C5C4sing1.38Å1.40ÅAromatic
C5C6sing1.51Å1.51Å
C16Nsing1.36Å1.33Å
C16O3doub1.21Å1.23Å
NC7sing1.48Å1.44Å
C6C7sing1.53Å1.54Å
C19C20sing1.53Å1.52Å
C20C21sing1.53Å1.52Å
C7C8sing1.53Å1.53Å
O8C8sing1.43Å1.45Å
C21C22sing1.53Å1.54Å
C8C9sing1.53Å1.54Å
C22C23sing1.53Å1.50Å
C9C10sing1.51Å1.44Å
O1C10doub1.21Å1.25Å
C23C24sing1.53Å1.55Å
C10N1sing1.35Å1.36Å
C24C25sing1.53Å1.52Å
N1C11sing1.46Å1.45Å
C11C12sing1.51Å1.53Å
C11C13sing1.53Å1.52Å
C25C26sing1.53Å1.56Å
C27C26sing1.53Å1.53Å
C27C28sing1.53Å1.55Å
C12N2sing1.37Å1.34Å
C12O2doub1.21Å1.20Å
C13C15sing1.51Å1.52Å
N2C29sing1.48Å1.43Å
C28C29sing1.53Å1.53Å
C31C15sing1.38Å1.40ÅAromatic
C31N15doub1.32Å1.43ÅAromatic
C15C14doub1.39Å1.39ÅAromatic
N15C32sing1.32Å1.38ÅAromatic
C14C33sing1.39Å1.44ÅAromatic
C32C33doub1.38Å1.39ÅAromatic
C4H1sing1.08Å1.08Å
C14H2sing1.08Å1.08Å
C6H3sing1.09Å1.10Å
C6H4sing1.09Å1.10Å
C11H5sing1.09Å1.10Å
C7H6sing1.09Å1.10Å
C8H7sing1.09Å1.10Å
C9H8sing1.09Å1.10Å
C9H9sing1.09Å1.10Å
C13H10sing1.09Å1.10Å
C13H11sing1.09Å1.10Å
N1H12sing0.97Å1.00Å
N2H13sing0.97Å1.00Å
C3H14sing1.08Å1.08Å
C33H15sing1.08Å1.08Å
C32H16sing1.08Å1.08Å
C31H17sing1.08Å1.08Å
O8H18sing0.97Å0.95Å
C29H19sing1.09Å1.10Å
C29H20sing1.09Å1.10Å
C28H21sing1.09Å1.10Å
C28H22sing1.09Å1.10Å
C27H23sing1.09Å1.10Å
C27H24sing1.09Å1.10Å
C26H25sing1.09Å1.10Å
C26H26sing1.09Å1.10Å
C25H27sing1.09Å1.10Å
C25H28sing1.09Å1.10Å
C24H29sing1.09Å1.10Å
C24H30sing1.09Å1.10Å
C23H31sing1.09Å1.10Å
C23H32sing1.09Å1.10Å
C22H33sing1.09Å1.10Å
C22H34sing1.09Å1.10Å
C21H35sing1.09Å1.10Å
C21H36sing1.09Å1.10Å
C20H37sing1.09Å1.10Å
C20H38sing1.09Å1.10Å
C19H39sing1.09Å1.10Å
C19H40sing1.09Å1.10Å
C18H41sing1.09Å1.10Å
C18H42sing1.09Å1.10Å
C17H43sing1.09Å1.10Å
C17H44sing1.09Å1.10Å
NH45sing0.97Å1.00Å
CH46sing1.08Å1.08Å
C2H47sing1.08Å1.08Å
C1H48sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1C118.9°120.0°
C1C2C3119.8°120.0°
C1C2H47120.1°120.0°
C2C1H48120.6°120.0°
C1CC5121.9°120.0°
C1CH46119.1°120.0°
CC1H48120.5°120.0°
C2C3C4121.8°120.0°
C2C3H14119.1°120.0°
C3C2H47120.1°120.0°
CC5C4119.0°120.0°
CC5C6118.4°120.0°
C5CH46119.0°120.0°
C3C4C5118.5°120.0°
C3C4H1120.7°120.0°
C4C3H14119.1°120.0°
C18C17C16112.0°109.5°
C17C18C19109.7°109.5°
C17C18H41109.4°109.4°
C17C18H42109.4°109.4°
C18C17H43108.8°109.5°
C18C17H44108.8°109.5°
C17C16N118.0°119.2°
C17C16O3122.2°120.4°
C16C17H43108.8°109.5°
C16C17H44108.8°109.5°
C18C19C20112.4°109.5°
C18C19H39108.8°109.5°
C18C19H40108.7°109.5°
C19C18H41109.4°109.5°
C19C18H42109.4°109.5°
C4C5C6122.5°120.0°
C5C4H1120.7°120.0°
C5C6C7115.0°109.5°
C5C6H3108.1°109.5°
C5C6H4108.1°109.5°
NC16O3119.7°120.5°
C16NC7127.1°116.5°
C16NH45116.5°121.8°
NC7C6107.1°109.6°
NC7C8113.7°108.9°
NC7H6109.7°109.5°
C7NH45116.4°121.7°
C6C7C8109.3°109.6°
C7C6H3108.1°109.5°
C7C6H4108.1°109.5°
C6C7H6108.4°109.6°
C19C20C21105.7°109.5°
C19C20H37110.4°109.4°
C19C20H38110.4°109.5°
C20C19H39108.7°109.4°
C20C19H40108.7°109.4°
C20C21C22113.7°109.5°
C20C21H35108.4°109.5°
C20C21H36108.4°109.4°
C21C20H37110.4°109.5°
C21C20H38110.4°109.5°
C7C8O8109.1°109.5°
C7C8C9113.2°109.5°
C8C7H6108.5°109.6°
C7C8H7108.5°109.4°
O8C8C9108.2°109.5°
O8C8H7109.6°109.5°
C8O8H18109.5°114.0°
C21C22C23115.5°109.5°
C21C22H33107.9°109.5°
C21C22H34107.9°109.5°
C22C21H35108.4°109.5°
C22C21H36108.4°109.5°
C8C9C10111.0°109.5°
C9C8H7108.3°109.4°
C8C9H8109.1°109.5°
C8C9H9109.1°109.5°
C22C23C24107.8°109.5°
C22C23H31109.9°109.5°
C22C23H32109.9°109.4°
C23C22H33107.9°109.5°
C23C22H34107.9°109.4°
C9C10O1123.0°120.0°
C9C10N1115.5°120.0°
C10C9H8109.1°109.5°
C10C9H9109.1°109.4°
O1C10N1121.4°120.1°
C23C24C25115.2°109.5°
C23C24H29108.0°109.5°
C23C24H30108.0°109.5°
C24C23H31109.9°109.5°
C24C23H32109.9°109.5°
C10N1C11123.6°120.1°
C10N1H12118.2°119.9°
C24C25C26116.9°109.5°
C24C25H27107.6°109.5°
C24C25H28107.6°109.5°
C25C24H29108.0°109.5°
C25C24H30108.0°109.5°
N1C11C12111.2°109.6°
N1C11C13110.7°109.4°
N1C11H5108.6°109.4°
C11N1H12118.2°120.0°
C12C11C13110.9°109.4°
C11C12N2117.6°118.7°
C11C12O2121.3°120.7°
C12C11H5107.6°109.5°
C11C13C15113.7°109.5°
C13C11H5107.7°109.4°
C11C13H10108.4°109.5°
C11C13H11108.4°109.4°
C25C26C27116.6°109.5°
C25C26H25107.7°109.4°
C25C26H26107.7°109.5°
C26C25H27107.6°109.5°
C26C25H28107.6°109.5°
C26C27C28119.7°109.5°
C26C27H23106.8°109.4°
C26C27H24106.8°109.4°
C27C26H25107.7°109.4°
C27C26H26107.6°109.5°
C27C28C29116.7°109.5°
C27C28H21107.6°109.5°
C27C28H22107.7°109.5°
C28C27H23106.9°109.5°
C28C27H24106.9°109.5°
N2C12O2121.1°120.7°
C12N2C29127.0°115.3°
C12N2H13116.5°122.3°
C13C15C31119.2°120.4°
C13C15C14118.8°120.4°
C15C13H10108.4°109.5°
C15C13H11108.4°109.5°
N2C29C28110.8°108.6°
C29N2H13116.5°122.3°
N2C29H19109.2°109.6°
N2C29H20109.2°109.7°
C28C29H19109.2°109.6°
C28C29H20109.1°109.7°
C29C28H21107.6°109.4°
C29C28H22107.6°109.5°
C15C31N15116.2°120.8°
C31C15C14121.9°119.2°
C15C31H17121.9°119.6°
C31N15C32124.1°121.7°
N15C31H17121.9°119.6°
C15C14C33119.4°118.4°
C15C14H2120.3°120.8°
N15C32C33118.6°120.8°
N15C32H16120.7°119.6°
C14C33C32119.7°119.1°
C33C14H2120.3°120.8°
C14C33H15120.2°120.4°
C32C33H15120.2°120.4°
C33C32H16120.7°119.6°
H3C6H4109.4°109.4°
H8C9H9109.5°109.4°
H10C13H11109.5°109.5°
H19C29H20109.4°109.6°
H21C28H22109.5°109.6°
H23C27H24109.5°109.5°
H25C26H26109.5°109.5°
H27C25H28109.5°109.4°
H29C24H30109.4°109.5°
H31C23H32109.5°109.4°
H33C22H34109.5°109.4°
H35C21H36109.5°109.5°
H37C20H38109.5°109.5°
H39C19H40109.5°109.5°
H41C18H42109.5°109.5°
H43C17H44109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1CH48180.0°179.6°
C1C2C3H47180.0°180.0°
C2C1CC51.2°0.5°
C1C2C3C40.8°0.1°
C1C2C3H14179.2°180.0°
C2C1CH46178.8°179.7°
CC1C2C30.4°0.4°
C1CC5H46180.0°179.9°
C1CC5C40.9°0.2°
C1CC5C6178.5°180.0°
CC1C2H47179.7°179.6°
C2C3C4H14180.0°179.9°
C2C3C4C51.1°0.2°
C2C3C4H1178.9°180.0°
C3C2C1H48179.6°180.0°
CC5C4C30.3°0.2°
CC5C4C6177.5°179.9°
CC5C6C789.6°95.7°
CC5C4H1179.7°180.0°
CC5C6H3149.5°24.3°
CC5C6H431.2°144.2°
C5CC1H48178.8°180.0°
C3C4C5H1180.0°179.8°
C3C4C5C6177.2°179.7°
C4C3C2H47179.1°179.9°
C18C17C16H43120.4°120.0°
C18C17C16H44120.4°120.0°
C17C18C19H41120.0°120.0°
C17C18C19H42120.0°120.0°
C18C17C16N131.3°128.6°
C18C17C16O352.9°51.4°
C17C18C19C20175.2°12.5°
C17C18C19H3964.3°132.5°
C17C18C19H4054.8°107.4°
C17C18H41H42119.9°119.9°
C18C17H43H44118.8°120.0°
C16C17C18C1953.3°107.7°
C17C16NO3175.9°180.0°
C17C16NC7171.2°179.7°
C16C17C18H41173.4°12.3°
C16C17C18H4266.7°132.2°
C16C17H43H44118.9°120.0°
C17C16NH458.8°0.2°
C18C19C20H39120.5°120.0°
C18C19C20H40120.4°120.0°
C18C19C20C21162.8°140.3°
C18C19C20H3743.4°99.7°
C18C19C20H3877.8°20.3°
C18C19H39H40118.7°120.1°
C19C18H41H42119.9°120.0°
C19C18C17H43173.7°132.3°
C19C18C17H4467.1°12.3°
C4C5C6C792.9°84.1°
C4C5C6H328.0°155.8°
C4C5C6H4146.3°35.9°
C5C4C3H14178.9°179.7°
C4C5CH46179.1°180.0°
C5C6C7N60.6°55.9°
C5C6C7H3120.8°120.0°
C5C6C7H4120.8°120.0°
C5C6C7C8175.8°63.5°
C6C5C4H12.8°0.1°
C5C6H3H4117.4°120.0°
C5C6C7H657.8°176.1°
C6C5CH461.5°0.1°
C16NC7H45180.0°180.0°
C16NC7C6106.2°51.8°
C16NC7C8132.9°171.7°
C16NC7H611.2°68.4°
NC16C17H43108.4°8.6°
NC16C17H4410.9°111.4°
O3C16NC74.7°0.3°
O3C16C17H4367.4°171.4°
O3C16C17H44173.3°68.6°
O3C16NH45175.3°179.8°
NC7C6C8123.6°119.4°
NC7C6H6118.3°120.2°
NC7C8H6122.4°119.9°
NC7C8O849.2°64.8°
NC7C8C971.3°175.2°
NC7C6H3178.6°64.1°
NC7C6H460.3°175.9°
NC7C8H7168.5°55.3°
C6C7C8H6118.0°120.3°
C6C7C8O870.4°175.4°
C6C7C8C9169.1°55.4°
C7C6H3H4117.5°120.0°
C6C7C8H748.8°64.6°
C6C7NH4573.8°128.2°
C19C20C21H37119.4°120.0°
C19C20C21H38119.4°120.0°
C19C20C21C2264.0°161.0°
C19C20C21H3556.6°79.0°
C19C20C21H36175.4°41.0°
C19C20H37H38121.7°120.0°
C20C19H39H40118.7°119.9°
C20C19C18H4155.2°107.4°
C20C19C18H4264.8°132.5°
C20C21C22H35120.6°120.0°
C20C21C22H36120.6°120.0°
C20C21C22C2386.1°93.3°
C20C21C22H3334.8°146.7°
C20C21C22H34153.0°26.7°
C20C21H35H36118.0°120.0°
C21C20H37H38121.8°120.0°
C21C20C19H3976.7°20.3°
C21C20C19H4042.4°99.7°
C7C8O8C9123.5°120.0°
C7C8O8H7118.6°120.0°
C7C8C9H7120.3°119.9°
C7C8C9C1071.1°58.6°
C8C7C6H355.0°176.5°
C8C7C6H463.4°56.5°
C7C8C9H8168.7°61.4°
C7C8C9H949.1°178.6°
C7C8O8H18180.0°180.0°
C8C7NH4547.1°8.3°
O8C8C9H7118.7°120.0°
O8C8C9C10167.9°61.4°
O8C8C7H6171.6°55.1°
O8C8C9H847.7°178.6°
O8C8C9H971.9°58.6°
C21C22C23H33120.9°120.0°
C21C22C23H34120.9°120.0°
C21C22C23C24157.8°152.1°
C21C22C23H3182.5°87.9°
C21C22C23H3238.1°32.1°
C21C22H33H34117.2°120.0°
C22C21H35H36118.1°120.0°
C22C21C20H37176.6°41.0°
C22C21C20H3855.4°79.0°
C8C9C10H8120.2°120.1°
C8C9C10H9120.2°120.0°
C8C9C10O1100.5°45.4°
C8C9C10N183.3°134.6°
C9C8C7H651.1°64.9°
C8C9H8H9119.3°120.0°
C9C8O8H1856.5°60.0°
C22C23C24H31119.7°120.1°
C22C23C24H32119.7°120.0°
C22C23C24C25155.2°160.6°
C22C23C24H2983.9°79.4°
C22C23C24H3034.4°40.6°
C22C23H31H32120.8°119.9°
C23C22H33H34117.2°119.9°
C23C22C21H35153.3°26.7°
C23C22C21H3634.5°146.7°
C9C10O1N1176.0°180.0°
C9C10N1C11173.0°179.2°
C10C9C8H749.2°178.6°
C10C9H8H9119.3°119.9°
C9C10N1H127.0°0.8°
O1C10N1C113.3°0.7°
O1C10C9H8139.3°165.5°
O1C10C9H919.8°74.6°
O1C10N1H12176.7°179.2°
C23C24C25H29120.9°120.0°
C23C24C25H30120.8°120.0°
C23C24C25C26117.4°82.7°
C23C24C25H27121.5°157.3°
C23C24C25H283.7°37.3°
C23C24H29H30117.4°120.0°
C24C23H31H32120.8°120.0°
C24C23C22H3336.9°32.0°
C24C23C22H3481.3°87.9°
C10N1C11H12180.0°180.0°
C10N1C11C1264.1°50.4°
C10N1C11C13172.1°69.7°
C10N1C11H554.1°170.4°
N1C10C9H836.9°14.6°
N1C10C9H9156.4°105.4°
C24C25C26H27121.1°120.0°
C24C25C26H28121.1°120.0°
C24C25C26C2755.5°158.9°
C24C25C26H25176.5°38.9°
C24C25C26H2665.5°81.1°
C24C25H27H28116.6°120.0°
C25C24H29H30117.4°120.0°
C25C24C23H3135.5°40.6°
C25C24C23H3285.0°79.4°
N1C11C12C13123.6°120.0°
N1C11C12H5118.8°120.0°
N1C11C13H5118.6°119.9°
N1C11C12N2139.8°148.4°
N1C11C12O242.7°31.6°
N1C11C13C15169.1°64.9°
N1C11C13H1070.2°55.2°
N1C11C13H1148.5°175.2°
C12C11C13H5117.5°120.0°
C11C12N2O2177.5°180.0°
C12C11C13C1545.2°175.0°
C11C12N2C29165.9°179.5°
C12C11C13H10165.9°65.0°
C12C11C13H1175.4°55.0°
C12C11N1H12115.9°129.6°
C11C12N2H1314.1°0.5°
C13C11C12N296.6°91.6°
C13C11C12O280.8°88.4°
C11C13C15H10120.6°120.0°
C11C13C15H11120.6°119.9°
C11C13C15C3179.3°89.9°
C11C13C15C14101.1°90.0°
C11C13H10H11118.0°120.0°
C13C11N1H127.9°110.3°
C25C26C27H25121.1°119.9°
C25C26C27H26121.0°120.0°
C25C26C27C28109.3°115.6°
C25C26C27H23129.3°124.4°
C25C26C27H2412.2°4.4°
C25C26H25H26116.7°120.0°
C26C25H27H28116.6°120.0°
C26C25C24H293.5°37.3°
C26C25C24H30121.8°157.3°
C26C27C28H23121.4°120.0°
C26C27C28H24121.4°120.0°
C26C27C28C2996.6°143.9°
C26C27C28H2124.4°24.0°
C26C27C28H22142.3°96.1°
C26C27H23H24115.4°119.9°
C27C26H25H26116.7°120.0°
C27C26C25H2765.6°81.1°
C27C26C25H28176.6°38.9°
C27C28C29N257.4°155.0°
C27C28C29H21121.1°119.9°
C27C28C29H22121.1°120.0°
C27C28C29H19177.6°35.3°
C27C28C29H2062.8°85.1°
C27C28H21H22116.7°120.1°
C28C27H23H24115.4°120.1°
C28C27C26H2511.8°4.3°
C28C27C26H26129.7°124.4°
C12N2C29H13180.0°180.0°
C12N2C29C28129.6°120.7°
N2C12C11H520.9°28.4°
C12N2C29H19110.2°119.6°
C12N2C29H209.4°0.8°
O2C12N2C2911.6°0.5°
O2C12C11H5161.6°151.6°
O2C12N2H13168.4°179.5°
C13C15C31C14179.6°180.0°
C13C15C31N15179.2°179.5°
C13C15C14C33178.4°180.0°
C13C15C14H21.6°0.2°
C15C13C11H572.3°55.0°
C15C13H10H11118.1°120.0°
C13C15C31H170.7°0.1°
N2C29C28H19120.2°119.7°
N2C29C28H20120.2°119.9°
N2C29H19H20119.4°120.4°
N2C29C28H21178.5°85.0°
N2C29C28H2263.6°35.0°
C28C29N2H1350.4°59.3°
C28C29H19H20119.4°120.5°
C29C28H21H22116.7°120.0°
C29C28C27H23142.0°96.1°
C29C28C27H2424.8°23.9°
C15C31N15H17180.0°179.4°
C15C31N15C320.7°0.8°
C31C15C14C332.0°0.0°
C31C15C14H2178.0°179.7°
C31C15C13H1041.3°150.0°
C31C15C13H11160.1°30.0°
N15C31C15C141.2°0.5°
C31N15C32C331.1°0.5°
C31N15C32H16178.9°179.4°
C15C14C33H2180.0°179.7°
C15C14C33C322.3°0.3°
C14C15C13H10138.2°30.0°
C14C15C13H1119.5°150.0°
C15C14C33H15177.7°179.8°
C14C15C31H17178.8°180.0°
N15C32C33C141.8°0.0°
N15C32C33H16180.0°179.9°
N15C32C33H15178.2°180.0°
C32N15C31H17179.3°179.8°
C14C33C32H15180.0°180.0°
C14C33C32H16178.2°180.0°
C32C33C14H2177.6°180.0°
H1C4C3H141.1°0.1°
H2C14C33H152.4°0.0°
H3C6C7H663.0°56.1°
H4C6C7H6178.6°63.8°
H5C11C13H1048.4°175.0°
H5C11C13H11167.1°65.0°
H5C11N1H12125.9°9.5°
H6C7C8H769.1°175.1°
H6C7NH45168.8°111.6°
H7C8C9H871.0°58.5°
H7C8C9H9169.5°61.4°
H7C8O8H1861.4°60.0°
H13N2C29H1969.8°60.4°
H13N2C29H20170.6°179.2°
H14C3C2H470.8°0.0°
H15C33C32H161.8°0.1°
H19C29C28H2161.3°155.3°
H19C29C28H2256.6°84.7°
H20C29C28H2158.3°34.8°
H20C29C28H22176.1°154.9°
H21C28C27H2397.0°144.0°
H21C28C27H24145.9°96.0°
H22C28C27H2320.9°23.9°
H22C28C27H2496.2°143.9°
H23C27C26H25109.7°115.7°
H23C27C26H268.2°4.4°
H24C27C26H25133.2°124.3°
H24C27C26H26108.8°115.6°
H25C26C25H2755.5°158.9°
H25C26C25H2862.4°81.1°
H26C26C25H27173.4°38.9°
H26C26C25H2855.5°158.8°
H27C25C24H29117.6°82.7°
H27C25C24H300.7°37.3°
H28C25C24H29124.5°157.4°
H28C25C24H30117.1°82.6°
H29C24C23H31156.4°160.6°
H29C24C23H3235.8°40.6°
H30C24C23H3185.3°79.4°
H30C24C23H32154.1°160.6°
H31C23C22H33156.6°152.1°
H31C23C22H3438.4°32.1°
H32C23C22H3382.8°88.0°
H32C23C22H34159.0°152.1°
H33C22C21H3585.8°93.3°
H33C22C21H36155.4°26.7°
H34C22C21H3532.4°146.7°
H34C22C21H3686.3°93.3°
H35C21C20H3762.8°161.1°
H35C21C20H38176.0°41.1°
H36C21C20H3756.0°78.9°
H36C21C20H3865.3°161.0°
H37C20C19H39163.9°140.2°
H37C20C19H4077.0°20.3°
H38C20C19H3942.7°99.8°
H38C20C19H40161.8°140.3°
H39C19C18H41175.6°12.5°
H39C19C18H4255.7°107.5°
H40C19C18H4165.3°132.6°
H40C19C18H42174.8°12.6°
H41C18C17H4366.2°107.7°
H41C18C17H4453.0°132.3°
H42C18C17H4353.7°12.3°
H42C18C17H44172.9°107.8°
H46CC1H481.2°0.1°
H47C2C1H480.3°0.0°

249697

PDB entries from 2026-02-25

PDB statisticsPDBj update infoContact PDBjnumon