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A1IVA

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
PGO1Gdoub1.48Å1.51Å
PGO2Gdoub1.48Å1.51Å
PGC3Bsing1.82Å1.81Å
PGOI4sing1.61Å1.69Å
PBO1Bdoub1.48Å1.51Å
PBO2Bdoub1.48Å1.51Å
PBC3Bsing1.82Å1.81Å
PBO3Asing1.61Å1.59Å
PAO1Adoub1.48Å1.48Å
PAO2Adoub1.48Å1.48Å
PAO3Asing1.61Å1.59Å
PAO5'sing1.61Å1.68Å
O5'C5'sing1.43Å1.44Å
C5'C4'sing1.53Å1.51Å
C4'O4'sing1.44Å1.44Å
C4'C3'sing1.54Å1.52Å
O4'C1'sing1.44Å1.42Å
C3'O3'sing1.43Å1.42Å
C3'C2'sing1.55Å1.53Å
C2'O2'sing1.43Å1.42Å
C2'C1'sing1.55Å1.53Å
C1'N9sing1.46Å1.46Å
N9C8sing1.36Å1.37ÅAromatic
N9C4sing1.37Å1.37ÅAromatic
C8N7doub1.30Å1.31ÅAromatic
N7C5sing1.35Å1.39ÅAromatic
C5C6sing1.41Å1.41ÅAromatic
C5C4doub1.41Å1.39ÅAromatic
C6N6sing1.38Å1.34Å
C6N1doub1.33Å1.35ÅAromatic
N1C2sing1.32Å1.34ÅAromatic
C2N3doub1.32Å1.34ÅAromatic
N3C4sing1.33Å1.34ÅAromatic
CI1CI2sing1.53Å1.53Å
CI1CI6sing1.53Å1.53Å
CI1OI1sing1.43Å1.43Å
CI2CI3sing1.53Å1.52Å
CI2OI2sing1.43Å1.42Å
CI3CI4sing1.53Å1.52Å
CI3OI3sing1.43Å1.42Å
CI4CI5sing1.53Å1.52Å
CI4OI4sing1.43Å1.39Å
CI5CI6sing1.53Å1.53Å
CI5OI5sing1.43Å1.42Å
CI6OI6sing1.43Å1.42Å
C1'H1'sing1.09Å1.10Å
C2H2sing1.08Å1.08Å
C2'H2'sing1.09Å1.10Å
C3'H3'sing1.09Å1.10Å
C3BH3Bsing1.09Å1.10Å
C3BH3B1sing1.09Å1.10Å
C4'H4'sing1.09Å1.10Å
C5'H5'2sing1.09Å1.10Å
C5'H5'1sing1.09Å1.10Å
C8H8sing1.08Å1.08Å
CI1HI1sing1.09Å1.10Å
CI2HI2sing1.09Å1.10Å
CI3HI3sing1.09Å1.10Å
CI4HI4sing1.09Å1.10Å
CI5HI5sing1.09Å1.10Å
CI6HI6sing1.09Å1.10Å
N6HN61sing0.97Å1.00Å
N6HN62sing0.97Å1.00Å
O2'HO2'sing0.97Å0.95Å
O3'HO3'sing0.97Å0.95Å
OI1HIO1sing0.97Å0.95Å
OI2HIO2sing0.97Å0.95Å
OI3HIO3sing0.97Å0.95Å
OI5HIO5sing0.97Å0.95Å
OI6HIO6sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1GPGO2G109.2°109.5°
O1GPGC3B108.9°109.5°
O1GPGOI4113.2°109.4°
O2GPGC3B109.4°109.5°
O2GPGOI4108.7°109.5°
C3BPGOI4107.4°109.5°
PGC3BPB117.3°109.5°
PGC3BH3B107.5°109.5°
PGC3BH3B1107.5°109.5°
PGOI4CI4111.9°123.0°
O1BPBO2B109.6°109.5°
O1BPBC3B107.6°109.5°
O1BPBO3A111.9°109.5°
O2BPBC3B109.5°109.5°
O2BPBO3A109.6°109.5°
C3BPBO3A108.6°109.5°
PBC3BH3B107.5°109.5°
PBC3BH3B1107.5°109.4°
PBO3APA132.8°134.0°
O1APAO2A118.7°109.5°
O1APAO3A107.6°109.5°
O1APAO5'107.6°109.5°
O2APAO3A107.6°109.5°
O2APAO5'107.0°109.4°
O3APAO5'107.9°109.5°
PAO5'C5'108.7°123.0°
O5'C5'C4'107.8°109.5°
O5'C5'H5'2109.9°109.5°
O5'C5'H5'1109.9°109.5°
C5'C4'O4'109.1°109.9°
C5'C4'C3'114.7°110.0°
C5'C4'H4'109.0°109.9°
C4'C5'H5'2109.9°109.5°
C4'C5'H5'1109.9°109.5°
O4'C4'C3'105.1°107.4°
C4'O4'C1'110.3°106.9°
O4'C4'H4'109.9°109.9°
C4'C3'O3'111.4°110.5°
C4'C3'C2'102.2°104.2°
C4'C3'H3'109.8°110.7°
C3'C4'H4'108.8°109.7°
O4'C1'C2'107.1°103.6°
O4'C1'N9108.6°110.6°
O4'C1'H1'109.6°110.6°
O3'C3'C2'112.0°110.5°
O3'C3'H3'111.3°110.4°
C3'O3'HO3'109.5°114.0°
C3'C2'O2'111.6°111.0°
C3'C2'C1'101.7°102.1°
C3'C2'H2'110.4°111.0°
C2'C3'H3'109.7°110.5°
O2'C2'C1'110.4°110.9°
O2'C2'H2'112.0°110.8°
C2'O2'HO2'109.5°114.0°
C2'C1'N9114.3°110.6°
C2'C1'H1'108.1°110.6°
C1'C2'H2'110.3°110.9°
C1'N9C8127.3°126.3°
C1'N9C4127.1°126.2°
N9C1'H1'109.1°110.6°
C8N9C4105.6°107.4°
N9C8N7114.1°110.0°
N9C8H8122.9°125.0°
N9C4C5105.9°106.0°
N9C4N3127.4°134.9°
C8N7C5103.8°109.5°
N7C8H8123.0°125.1°
N7C5C6132.5°134.7°
N7C5C4110.5°107.1°
C6C5C4117.0°118.2°
C5C6N6123.9°120.8°
C5C6N1117.7°118.4°
C5C4N3126.6°119.0°
N6C6N1118.4°120.8°
C6N6HN61109.5°120.0°
C6N6HN62109.5°120.0°
C6N1C2118.8°121.2°
N1C2N3128.8°122.5°
N1C2H2115.6°118.8°
C2N3C4111.1°120.7°
N3C2H2115.6°118.8°
CI2CI1CI6111.9°109.5°
CI2CI1OI1111.2°109.4°
CI1CI2CI3111.9°109.5°
CI1CI2OI2110.0°109.5°
CI2CI1HI1106.9°109.5°
CI1CI2HI2107.8°109.5°
CI6CI1OI1111.3°109.5°
CI1CI6CI5112.1°109.4°
CI1CI6OI6110.6°109.5°
CI6CI1HI1107.0°109.5°
CI1CI6HI6107.3°109.5°
OI1CI1HI1108.2°109.5°
CI1OI1HIO1109.5°114.0°
CI3CI2OI2110.1°109.4°
CI2CI3CI4110.2°109.5°
CI2CI3OI3110.1°109.5°
CI3CI2HI2107.8°109.5°
CI2CI3HI3108.3°109.4°
OI2CI2HI2109.2°109.5°
CI2OI2HIO2109.5°113.9°
CI4CI3OI3110.1°109.5°
CI3CI4CI5110.9°109.4°
CI3CI4OI4109.1°109.5°
CI4CI3HI3108.4°109.5°
CI3CI4HI4108.6°109.4°
OI3CI3HI3109.7°109.5°
CI3OI3HIO3109.5°114.0°
CI5CI4OI4109.1°109.5°
CI4CI5CI6111.3°109.5°
CI4CI5OI5110.3°109.5°
CI5CI4HI4108.6°109.5°
CI4CI5HI5107.9°109.5°
OI4CI4HI4110.4°109.5°
CI6CI5OI5110.1°109.4°
CI5CI6OI6110.7°109.5°
CI6CI5HI5107.9°109.5°
CI5CI6HI6107.3°109.5°
OI5CI5HI5109.2°109.5°
CI5OI5HIO5109.5°114.1°
OI6CI6HI6108.6°109.5°
CI6OI6HIO6109.5°114.0°
H3BC3BH3B1109.5°109.5°
H5'2C5'H5'1109.5°109.5°
HN61N6HN62109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1GPGO2GC3B119.1°120.0°
O1GPGO2GOI4124.0°120.0°
O1GPGC3BOI4122.9°120.0°
O1GPGC3BPB80.7°60.0°
O1GPGOI4CI418.1°60.1°
O1GPGC3BH3B40.4°180.0°
O1GPGC3BH3B1158.2°60.0°
O2GPGC3BOI4117.8°120.0°
O2GPGC3BPB160.0°60.0°
O2GPGOI4CI4103.5°59.9°
O2GPGC3BH3B78.9°60.0°
O2GPGC3BH3B138.9°180.0°
PGC3BPBO1B66.4°60.0°
PGC3BPBO2B52.7°60.0°
PGC3BPBH3B121.1°120.0°
PGC3BPBH3B1121.1°120.0°
PGC3BPBO3A172.4°180.0°
C3BPGOI4CI4138.3°179.9°
PGC3BH3BH3B1116.4°120.0°
OI4PGC3BPB42.3°180.0°
PGOI4CI4CI3138.0°120.1°
PGOI4CI4CI5100.6°120.0°
OI4PGC3BH3B163.4°60.1°
OI4PGC3BH3B178.9°60.0°
PGOI4CI4HI418.7°0.1°
O1BPBO2BC3B117.8°120.0°
O1BPBO2BO3A123.1°120.0°
O1BPBC3BO3A121.2°120.0°
O1BPBO3APA179.2°60.0°
O1BPBC3BH3B172.5°60.0°
O1BPBC3BH3B154.7°180.0°
O2BPBC3BO3A119.7°120.0°
O2BPBO3APA57.4°59.9°
O2BPBC3BH3B68.4°180.0°
O2BPBC3BH3B1173.8°60.0°
C3BPBO3APA62.2°180.0°
PBC3BH3BH3B1116.5°120.0°
PBO3APAO1A18.3°60.0°
PBO3APAO2A110.6°60.0°
PBO3APAO5'134.2°180.0°
O3APBC3BH3B51.3°60.0°
O3APBC3BH3B166.5°60.1°
O1APAO2AO3A122.4°120.0°
O1APAO2AO5'121.9°119.9°
O1APAO3AO5'115.8°120.0°
O1APAO5'C5'42.4°45.0°
O2APAO3AO5'115.2°120.0°
O2APAO5'C5'171.0°75.0°
O3APAO5'C5'73.5°165.0°
PAO5'C5'C4'139.0°180.0°
PAO5'C5'H5'219.3°60.0°
PAO5'C5'H5'1101.3°60.0°
O5'C5'C4'H5'2119.8°120.0°
O5'C5'C4'H5'1119.8°120.0°
O5'C5'C4'O4'54.1°66.4°
O5'C5'C4'C3'63.5°175.5°
O5'C5'C4'H4'174.1°54.6°
O5'C5'H5'2H5'1120.8°120.0°
C5'C4'O4'C3'123.6°119.6°
C5'C4'O4'H4'119.5°121.1°
C5'C4'C3'H4'122.4°121.0°
C5'C4'O4'C1'140.2°146.0°
C5'C4'C3'O3'87.3°119.8°
C5'C4'C3'C2'152.9°121.5°
C5'C4'C3'H3'36.4°2.7°
C4'C5'H5'2H5'1120.7°120.0°
O4'C4'C3'H4'117.7°119.4°
O4'C4'C3'O3'152.8°120.6°
O4'C4'C3'C2'33.0°2.0°
C4'O4'C1'C2'6.8°39.8°
C4'O4'C1'N9117.1°158.4°
C4'O4'C1'H1'123.8°78.7°
O4'C4'C3'H3'83.5°116.8°
O4'C4'C5'H5'2173.9°173.5°
O4'C4'C5'H5'165.6°53.5°
C3'C4'O4'C1'16.7°26.3°
C4'C3'O3'C2'113.9°114.8°
C4'C3'O3'H3'122.9°122.7°
C4'C3'C2'H3'116.5°118.9°
C4'C3'C2'O2'81.9°139.0°
C4'C3'C2'C1'35.8°20.8°
C4'C3'C2'H2'152.9°97.3°
C3'C4'C5'H5'256.2°55.5°
C3'C4'C5'H5'1176.7°64.5°
C4'C3'O3'HO3'180.0°176.2°
O4'C1'C2'C3'27.0°36.9°
O4'C1'C2'O2'91.6°155.2°
O4'C1'C2'N9120.3°118.5°
O4'C1'C2'H1'118.0°118.5°
O4'C1'N9H1'119.4°122.9°
O4'C1'N9C840.8°21.4°
O4'C1'N9C4140.0°159.0°
O4'C1'C2'H2'144.1°81.3°
C1'O4'C4'H4'100.2°93.0°
O3'C3'C2'H3'124.1°122.5°
O3'C3'C2'O2'37.4°20.4°
O3'C3'C2'C1'155.2°97.8°
O3'C3'C2'H2'87.8°144.0°
O3'C3'C4'H4'35.1°1.2°
C3'C2'O2'C1'112.3°112.7°
C3'C2'O2'H2'124.3°123.7°
C3'C2'C1'H2'117.1°118.2°
C3'C2'C1'N993.3°155.5°
C3'C2'C1'H1'145.1°81.6°
C2'C3'C4'H4'84.7°117.5°
C3'C2'O2'HO2'180.0°67.2°
C2'C3'O3'HO3'66.1°61.4°
O2'C2'C1'H2'124.3°123.5°
O2'C2'C1'N9148.1°86.3°
O2'C2'C1'H1'26.5°36.6°
O2'C2'C3'H3'161.6°102.1°
C2'C1'N9H1'121.1°122.9°
C2'C1'N9C878.6°92.7°
C2'C1'N9C4100.5°86.8°
C1'C2'C3'H3'80.7°139.8°
C1'C2'O2'HO2'67.7°180.0°
C1'N9C8C4179.3°179.6°
C1'N9C8N7179.3°180.0°
C1'N9C4C5179.3°179.9°
C1'N9C4N30.8°0.3°
N9C1'C2'H2'23.8°37.2°
C1'N9C8H80.7°0.2°
N9C8N7H8180.0°179.9°
N9C8N7C50.0°0.2°
C8N9C4C50.0°0.3°
C8N9C4N3179.9°179.9°
C8N9C1'H1'160.2°144.3°
C4N9C8N70.0°0.3°
N9C4C5N70.0°0.2°
N9C4C5C6179.9°179.8°
N9C4C5N3179.9°179.8°
N9C4N3C2179.9°179.7°
C4N9C1'H1'20.6°36.1°
C4N9C8H8180.0°179.8°
C8N7C5C6179.9°180.0°
C8N7C5C40.0°0.0°
N7C5C6C4179.9°180.0°
N7C5C6N60.8°0.0°
N7C5C6N1179.9°180.0°
N7C5C4N3179.9°180.0°
C5N7C8H8180.0°179.9°
C5C6N6N1179.3°179.9°
C5C6N1C20.0°0.0°
C6C5C4N30.0°0.0°
C5C6N6HN61179.3°0.0°
C5C6N6HN6260.7°180.0°
C4C5C6N6179.3°179.9°
C4C5C6N10.0°0.0°
C5C4N3C20.1°0.0°
N6C6N1C2179.3°179.9°
C6N6HN61HN62120.0°180.0°
C6N1C2N30.1°0.0°
C6N1C2H2179.9°180.0°
N1C6N6HN610.0°180.0°
N1C6N6HN62120.0°0.1°
N1C2N3H2180.0°180.0°
N1C2N3C40.1°0.0°
C4N3C2H2179.9°180.0°
CI2CI1CI6OI1125.1°119.9°
CI2CI1CI6HI1116.8°120.0°
CI2CI1OI1HI1117.2°120.0°
CI1CI2CI3OI2122.6°120.0°
CI1CI2CI3HI2118.4°120.0°
CI1CI2OI2HI2118.1°120.1°
CI1CI2CI3CI429.9°60.0°
CI1CI2CI3OI3151.6°180.0°
CI2CI1CI6CI561.1°60.0°
CI2CI1CI6OI663.0°180.0°
CI1CI2CI3HI388.5°60.0°
CI2CI1CI6HI6178.7°60.0°
CI2CI1OI1HIO1180.0°180.0°
CI1CI2OI2HIO2180.0°60.0°
CI6CI1OI1HI1117.3°120.1°
CI6CI1CI2CI331.0°60.0°
CI6CI1CI2OI2153.7°59.9°
CI1CI6CI5CI424.5°60.0°
CI1CI6CI5OI6124.0°120.0°
CI1CI6CI5HI6117.6°120.0°
CI1CI6CI5OI598.1°180.0°
CI1CI6OI6HI6117.5°120.0°
CI6CI1CI2HI287.4°180.0°
CI1CI6CI5HI5142.8°60.0°
CI6CI1OI1HIO154.5°60.0°
CI1CI6OI6HIO6180.0°60.0°
OI1CI1CI2CI394.2°180.0°
OI1CI1CI2OI228.5°60.0°
OI1CI1CI6CI564.0°180.0°
OI1CI1CI6OI6171.9°60.0°
OI1CI1CI2HI2147.4°60.0°
OI1CI1CI6HI653.6°60.0°
CI3CI2OI2HI2118.2°120.0°
CI2CI3CI4OI3121.6°120.0°
CI2CI3CI4HI3118.4°120.0°
CI2CI3OI3HI3119.1°120.0°
CI2CI3CI4CI567.1°60.0°
CI2CI3CI4OI4172.6°180.0°
CI3CI2CI1HI1147.8°60.1°
CI2CI3CI4HI452.2°60.0°
CI3CI2OI2HIO256.2°180.0°
CI2CI3OI3HIO3180.0°59.9°
OI2CI2CI3CI492.7°60.0°
OI2CI2CI3OI329.0°60.0°
OI2CI2CI1HI189.5°180.0°
OI2CI2CI3HI3148.9°180.0°
CI4CI3OI3HI3119.2°120.0°
CI3CI4CI5OI4120.2°120.0°
CI3CI4CI5HI4119.3°119.9°
CI3CI4OI4HI4119.3°120.0°
CI3CI4CI5CI637.0°60.0°
CI3CI4CI5OI5159.5°180.0°
CI4CI3CI2HI2148.3°180.0°
CI3CI4CI5HI581.3°60.0°
CI4CI3OI3HIO358.3°180.0°
OI3CI3CI4CI5171.2°180.0°
OI3CI3CI4OI451.0°60.0°
OI3CI3CI2HI290.0°60.0°
OI3CI3CI4HI469.5°60.0°
CI5CI4OI4HI4119.4°120.1°
CI4CI5CI6OI5122.6°120.0°
CI4CI5CI6HI5118.3°120.1°
CI4CI5OI5HI5118.4°120.0°
CI4CI5CI6OI699.5°180.0°
CI5CI4CI3HI351.2°60.0°
CI4CI5CI6HI6142.1°59.9°
CI4CI5OI5HIO589.1°180.0°
OI4CI4CI5CI6157.2°180.0°
OI4CI4CI5OI580.3°60.1°
OI4CI4CI3HI369.0°60.0°
OI4CI4CI5HI538.9°60.0°
CI6CI5OI5HI5118.3°120.0°
CI5CI6OI6HI6117.6°120.0°
CI5CI6CI1HI1177.9°60.0°
CI6CI5CI4HI482.3°59.9°
CI6CI5OI5HIO5147.7°60.0°
CI5CI6OI6HIO655.2°180.0°
OI5CI5CI6OI6137.8°60.0°
OI5CI5CI4HI440.2°60.0°
OI5CI5CI6HI619.4°60.1°
OI6CI6CI1HI153.8°60.0°
OI6CI6CI5HI518.7°60.0°
H1'C1'C2'H2'97.8°160.1°
H2'C2'C3'H3'36.4°21.6°
H2'C2'O2'HO2'55.7°56.5°
H3'C3'C4'H4'158.9°123.7°
H3'C3'O3'HO3'57.1°61.1°
H4'C4'C5'H5'266.1°65.4°
H4'C4'C5'H5'154.4°174.6°
HI1CI1CI2HI229.4°59.9°
HI1CI1CI6HI664.5°180.0°
HI1CI1OI1HIO162.8°60.0°
HI2CI2CI3HI329.9°60.0°
HI2CI2OI2HIO262.0°60.0°
HI3CI3CI4HI4170.6°180.0°
HI3CI3OI3HIO360.9°60.0°
HI4CI4CI5HI5159.4°180.0°
HI5CI5CI6HI699.7°180.0°
HI5CI5OI5HIO529.4°60.0°
HI6CI6OI6HIO662.5°60.0°

250835

PDB entries from 2026-03-18

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