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SummaryGeometryRelated PDB entries

A1ICD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C02O01doub1.22Å1.25Å
N03C02sing1.34Å1.58Å
C04N03sing1.47Å1.20Å
S07C06sing1.84Å1.72Å
C06C05sing1.54Å1.24Å
N08C05sing1.47Å1.29Å
C05C04sing1.53Å1.69Å
C09C04sing1.54Å1.40Å
C10C09sing1.53Å1.50Å
C11C10sing1.53Å1.60Å
C12C11sing1.53Å1.64Å
C13C12sing1.53Å1.61Å
C14C13sing1.51Å1.63Å
C16N15sing1.46Å1.55Å
C17C16sing1.50Å1.62Å
C18C17doub1.37Å1.44ÅAromatic
C19C18sing1.39Å1.49ÅAromatic
N20C19doub1.32Å1.48ÅAromatic
O22NI21sing2.00Å2.09Å
O23NI21sing2.00Å2.08Å
O24NI21sing2.00Å2.06Å
O25NI21sing2.00Å2.09Å
NI21N20sing2.11Å2.15Å
C26N20sing1.32Å1.38ÅAromatic
C27C26doub1.42Å1.57ÅAromatic
C28C27sing1.41Å1.47ÅAromatic
C29C28doub1.35Å1.39ÅAromatic
C30C29sing1.41Å1.52ÅAromatic
C31C30doub1.42Å1.53ÅAromatic
N32C31sing1.32Å1.39ÅAromatic
C33N32doub1.32Å1.44ÅAromatic
C34C33sing1.39Å1.49ÅAromatic
C35C34doub1.37Å1.44ÅAromatic
N15C14sing1.35Å1.53Å
O36C14doub1.21Å1.25Å
C02N08sing1.34Å1.46Å
S07C09sing1.85Å1.40Å
C17C27sing1.40Å1.47ÅAromatic
NI21N32sing2.11Å2.21Å
C26C31sing1.44Å1.38ÅAromatic
C30C35sing1.40Å1.47ÅAromatic
C36N15sing1.46Å1.06Å
C04H1sing1.09Å1.10Å
C05H2sing1.09Å1.10Å
C06H3sing1.09Å1.10Å
C06H4sing1.09Å1.10Å
C09H5sing1.09Å1.10Å
C10H6sing1.09Å1.10Å
C10H7sing1.09Å1.10Å
C11H8sing1.09Å1.10Å
C11H9sing1.09Å1.10Å
C12H10sing1.09Å1.10Å
C12H11sing1.09Å1.10Å
C13H12sing1.09Å1.10Å
C13H13sing1.09Å1.10Å
C16H14sing1.09Å1.10Å
C16H15sing1.09Å1.10Å
C18H16sing1.08Å1.08Å
C19H17sing1.08Å1.08Å
C28H18sing1.08Å1.08Å
C29H19sing1.08Å1.08Å
C33H20sing1.08Å1.08Å
C34H21sing1.08Å1.08Å
C35H22sing1.08Å1.08Å
N03H23sing0.97Å1.00Å
N08H24sing0.97Å1.00Å
C36H29sing1.09Å1.10Å
C36H30sing1.09Å1.10Å
C36H31sing1.09Å1.10Å
O24H25sing0.97Å0.95Å
O25H26sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
O01C02N03127.7°123.1°
O01C02N08126.5°123.0°
C02N03C04111.1°109.0°
N03C02N08105.7°113.9°
C02N03H23124.4°125.5°
N03C04C05105.9°104.0°
N03C04C09112.8°109.2°
N03C04H1114.5°110.3°
C04N03H23124.5°125.5°
S07C06C05110.5°102.7°
C06S07C0999.8°95.0°
S07C06H3109.2°110.7°
S07C06H4109.2°110.9°
C06C05N08109.3°109.5°
C06C05C04105.9°112.4°
C06C05H2113.4°110.2°
C05C06H3109.2°110.8°
C05C06H4109.2°110.8°
N08C05C04108.6°104.0°
C05N08C02108.5°109.0°
N08C05H2112.5°110.3°
C05N08H24125.8°125.5°
C05C04C09105.0°112.8°
C05C04H1107.1°110.2°
C04C05H2107.0°110.3°
C04C09C10108.1°110.8°
C04C09S07112.3°102.3°
C09C04H1110.8°110.2°
C04C09H5106.5°110.7°
C09C10C11109.2°109.5°
C10C09S07117.4°111.6°
C10C09H5105.3°110.7°
C09C10H6109.5°109.5°
C09C10H7109.5°109.5°
C10C11C12106.0°109.5°
C11C10H6109.5°109.4°
C11C10H7109.6°109.5°
C10C11H8110.3°109.4°
C10C11H9110.3°109.5°
C11C12C13109.5°109.4°
C12C11H8110.4°109.5°
C12C11H9110.3°109.5°
C11C12H10109.5°109.4°
C11C12H11109.5°109.5°
C12C13C14105.8°109.5°
C13C12H10109.4°109.5°
C13C12H11109.5°109.5°
C12C13H12110.4°109.5°
C12C13H13110.4°109.5°
C13C14N15118.5°120.0°
C13C14O36121.1°119.9°
C14C13H12110.4°109.4°
C14C13H13110.4°109.4°
N15C16C17104.9°109.5°
C16N15C14117.9°120.0°
C16N15C36122.0°120.0°
N15C16H14110.6°109.5°
N15C16H15110.6°109.4°
C16C17C18119.6°120.8°
C16C17C27120.0°120.8°
C17C16H14110.6°109.5°
C17C16H15110.6°109.5°
C17C18C19119.6°119.8°
C18C17C27120.4°118.4°
C17C18H16120.2°120.3°
C18C19N20120.0°121.4°
C19C18H16120.2°120.0°
C18C19H17120.0°119.3°
C19N20NI21128.8°130.5°
C19N20C26122.7°121.3°
N20C19H17120.0°119.3°
O22NI21O23179.4°180.0°
O22NI21O2490.4°90.0°
O22NI21O2589.1°90.0°
O22NI21N2090.6°90.0°
O22NI21N3289.4°89.9°
O23NI21O2489.9°90.0°
O23NI21O2590.4°90.0°
O23NI21N2089.9°90.0°
O23NI21N3290.4°90.0°
O24NI21O2586.6°92.8°
O24NI21N2082.3°92.4°
O24NI21N32163.2°174.8°
NI21O24H25109.5°114.0°
O25NI21N20168.9°174.8°
O25NI21N32110.2°92.5°
NI21O25H26109.5°114.0°
NI21N20C26108.4°108.1°
N20NI21N3280.9°82.4°
N20C26C27118.1°120.3°
N20C26C31122.9°120.7°
C26C27C28121.0°119.9°
C26C27C17119.3°118.7°
C27C26C31119.0°119.0°
C27C28C29120.0°121.1°
C28C27C17119.8°121.3°
C27C28H18120.0°119.5°
C28C29C30120.4°121.1°
C29C28H18120.0°119.4°
C28C29H19119.8°119.4°
C29C30C31120.3°120.0°
C29C30C35120.5°121.3°
C30C29H19119.8°119.5°
C30C31N32120.4°120.4°
C30C31C26119.3°118.9°
C31C30C35119.2°118.7°
C31N32C33120.2°121.3°
C31N32NI21107.5°108.2°
N32C31C26120.3°120.6°
N32C33C34121.5°121.5°
C33N32NI21132.3°130.5°
N32C33H20119.2°119.3°
C33C34C35119.7°119.8°
C34C33H20119.2°119.3°
C33C34H21120.1°120.0°
C34C35C30118.9°118.3°
C35C34H21120.1°120.2°
C34C35H22120.6°120.9°
N15C14O36120.4°120.1°
C14N15C36120.2°120.0°
C02N08H24125.8°125.5°
S07C09H5106.4°110.4°
C30C35H22120.5°120.9°
N15C36H29109.5°109.5°
N15C36H30109.4°109.5°
N15C36H31109.5°109.5°
H3C06H4109.5°110.7°
H6C10H7109.5°109.5°
H8C11H9109.5°109.4°
H10C12H11109.5°109.5°
H12C13H13109.5°109.5°
H14C16H15109.5°109.4°
H29C36H30109.4°109.4°
H29C36H31109.5°109.5°
H30C36H31109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
O01C02N03N08177.5°179.8°
O01C02N03C04178.3°180.0°
O01C02N08C05177.6°180.0°
O01C02N03H231.7°0.0°
O01C02N08H242.4°0.2°
C02N03C04H23180.0°180.0°
N03C02N08C054.8°0.2°
C02N03C04C051.8°0.1°
C02N03C04C09112.4°120.5°
C02N03C04H1119.7°118.2°
N03C02N08H24175.1°179.7°
N03C04C05C06116.0°118.4°
N03C04C05N081.2°0.0°
N03C04C05C09119.5°118.2°
N03C04C05H1122.6°118.1°
N03C04C09H1129.9°121.3°
N03C04C09C1036.8°28.2°
C04N03C02N084.2°0.2°
N03C04C09S0794.4°90.9°
N03C04C05H2122.9°118.2°
N03C04C09H5149.6°151.5°
S07C06C05H3120.1°118.3°
S07C06C05H4120.2°118.5°
S07C06C05N08105.4°90.5°
S07C06C05C0411.4°24.6°
C06S07C09C0425.3°34.3°
C06S07C09C10151.6°152.8°
S07C06C05H2128.3°148.0°
S07C06H3H4119.6°123.4°
C06S07C09H590.9°83.6°
C06C05N08C04115.0°120.3°
C06C05N08H2126.8°121.4°
C06C05C04H2121.2°123.4°
C06C05C04C093.5°0.2°
C06C05N08C02111.2°120.2°
C05C06S07C0923.1°34.5°
C06C05C04H1121.4°123.5°
C05C06H3H4119.5°123.3°
C06C05N08H2468.9°59.9°
N08C05C04H2121.6°118.2°
N08C05C04C09120.8°118.2°
C05N08C02H24180.0°179.9°
N08C05C04H1121.4°118.1°
N08C05C06H314.8°151.3°
N08C05C06H4134.5°28.0°
C05C04C09H1115.3°123.6°
C05C04C09C10151.6°143.3°
C04C05N08C023.9°0.1°
C05C04C09S0720.4°24.2°
C04C05C06H3131.5°93.6°
C04C05C06H4108.8°143.1°
C05C04C09H595.6°93.4°
C05C04N03H23178.2°179.9°
C04C05N08H24176.1°179.8°
C04C09C10S07128.4°113.3°
C04C09C10H5113.5°123.2°
C04C09C10C11138.9°175.0°
C04C09S07H5116.1°117.9°
C09C04C05H2117.6°123.6°
C04C09C10H6101.2°65.0°
C04C09C10H718.9°55.0°
C09C04N03H2367.6°59.4°
C09C10C11H6119.9°120.0°
C09C10C11H7120.0°120.0°
C09C10C11C12169.0°180.0°
C10C09S07H5117.6°123.6°
C10C09C04H193.0°93.1°
C09C10H6H7120.1°120.1°
C09C10C11H849.5°60.0°
C09C10C11H971.6°60.0°
C10C11C12H8119.4°120.0°
C10C11C12H9119.5°120.0°
C10C11C12C13167.8°180.0°
C11C10C09S0792.8°71.7°
C11C10C09H525.4°51.8°
C11C10H6H7120.2°119.9°
C10C11H8H9121.6°120.0°
C10C11C12H1047.8°60.0°
C10C11C12H1172.3°60.0°
C11C12C13H10120.0°119.9°
C11C12C13H11120.0°120.0°
C11C12C13C1466.5°180.0°
C12C11C10H671.1°60.0°
C12C11C10H749.0°59.9°
C12C11H8H9121.6°120.0°
C11C12H10H11120.0°120.0°
C11C12C13H1253.0°60.0°
C11C12C13H13174.1°60.0°
C12C13C14H12119.4°120.0°
C12C13C14H13119.4°120.0°
C12C13C14N15123.7°180.0°
C12C13C14O3656.0°0.0°
C13C12C11H872.8°60.0°
C13C12C11H948.3°60.0°
C13C12H10H11120.0°120.0°
C12C13H12H13121.7°120.1°
C13C14N15C16179.4°180.0°
C13C14N15O36179.7°179.9°
C13C14N15C360.3°0.1°
C14C13C12H10173.5°60.1°
C14C13C12H1153.5°60.0°
C14C13H12H13121.7°119.9°
N15C16C17H14119.3°120.1°
N15C16C17H15119.3°120.0°
N15C16C17C1826.6°100.0°
C16N15C14C36179.7°179.9°
C16N15C14O360.3°0.1°
N15C16C17C27152.5°79.9°
N15C16H14H15122.1°119.9°
C16N15C36H29180.0°89.9°
C16N15C36H3060.0°150.1°
C16N15C36H3160.0°30.1°
C16C17C18C27179.1°180.0°
C16C17C18C19179.4°179.7°
C16C17C27C26179.5°179.6°
C16C17C27C281.0°0.5°
C17C16N15C14107.4°90.0°
C17C16N15C3672.8°89.9°
C17C16H14H15122.1°120.0°
C16C17C18H160.7°0.3°
C17C18C19H16180.0°180.0°
C17C18C19N200.1°0.1°
C18C17C27C260.4°0.4°
C18C17C27C28179.9°179.5°
C18C17C16H1492.7°20.0°
C18C17C16H15145.9°140.0°
C17C18C19H17179.9°179.9°
C18C19N20H17180.0°180.0°
C18C19N20NI21179.9°179.6°
C18C19N20C260.2°0.4°
C19C18C17C270.2°0.3°
C19N20NI21O2290.9°90.3°
C19N20NI21O2389.3°89.7°
C19N20NI21O240.6°0.3°
C19N20NI21O252.2°179.8°
C19N20NI21C26179.7°180.0°
C19N20C26C270.0°0.3°
C19N20NI21N32179.8°179.8°
C19N20C26C31179.9°179.8°
N20C19C18H16179.9°179.9°
O22NI21O23O24122.2°118.2°
O22NI21O23O2535.6°149.1°
O22NI21O23N20155.5°25.7°
O22NI21O23N3274.6°56.6°
O22NI21O24O2589.1°90.0°
O22NI21O24N2090.6°90.0°
O22NI21O24N3289.3°89.4°
O22NI21O25N2088.9°89.5°
O22NI21O25N3289.1°89.9°
O22NI21N20N3289.3°90.0°
O22NI21N20C2689.4°89.7°
O22NI21N32C3190.7°89.7°
O22NI21N32C3388.8°90.2°
O22NI21O24H25179.5°45.0°
O22NI21O25H260.0°135.0°
O23NI21O24O2590.4°90.0°
O23NI21O24N2089.9°90.0°
O23NI21O24N3291.3°90.5°
O23NI21O25N2091.5°90.5°
O23NI21O25N3290.6°90.0°
O23NI21N20N3290.4°90.0°
O23NI21N20C2690.4°90.3°
O23NI21N32C3189.9°90.2°
O23NI21N32C3390.6°89.8°
O23NI21O24H250.0°135.0°
O23NI21O25H26179.7°45.0°
O24NI21O25N201.5°179.5°
O24NI21O25N32179.5°179.9°
O24NI21N20N32179.6°180.0°
O24NI21N20C26179.7°179.7°
O24NI21N32C311.3°0.3°
O24NI21N32C33178.2°179.7°
O24NI21O25H2690.4°135.0°
O25NI21N20N32178.1°0.5°
O25NI21N20C26178.1°0.2°
O25NI21N32C31179.5°179.7°
O25NI21N32C330.0°0.2°
O25NI21O24H2590.4°45.0°
NI21N20C26C27179.7°179.7°
N20NI21N32C310.1°0.2°
N20NI21N32C33179.6°179.8°
NI21N20C26C310.2°0.3°
NI21N20C19H170.1°0.4°
N20NI21O24H2589.9°134.9°
N20NI21O25H2688.9°45.5°
N20C26C27C31180.0°180.0°
N20C26C27C28179.8°179.8°
N20C26C31C30179.9°179.9°
N20C26C31N320.3°0.1°
N20C26C27C170.3°0.1°
C26N20NI21N320.1°0.3°
C26N20C19H17179.8°179.7°
C26C27C28C17179.5°179.8°
C26C27C28C290.5°0.2°
C27C26C31C300.0°0.1°
C27C26C31N32179.6°179.9°
C26C27C28H18179.5°179.9°
C27C28C29H18180.0°179.9°
C27C28C29C300.4°0.1°
C28C27C26C310.3°0.3°
C27C28C29H19179.5°180.0°
C28C29C30H19180.0°179.9°
C28C29C30C310.2°0.1°
C29C28C27C17180.0°179.9°
C28C29C30C35179.9°179.9°
C29C30C31C35180.0°180.0°
C29C30C31N32179.7°179.9°
C29C30C35C34180.0°179.9°
C29C30C31C260.1°0.1°
C30C29C28H18179.6°180.0°
C29C30C35H220.0°0.1°
C30C31N32C26179.6°180.0°
C30C31N32C330.6°0.1°
C31C30C35C340.1°0.1°
C30C31N32NI21179.8°179.9°
C31C30C29H19179.8°179.8°
C31C30C35H22179.9°179.9°
C31N32C33NI21179.5°180.0°
C31N32C33C340.6°0.1°
N32C31C30C350.2°0.0°
C31N32C33H20179.4°179.8°
N32C33C34H20180.0°180.0°
N32C33C34C350.3°0.1°
C33N32C31C26179.8°179.9°
N32C33C34H21179.7°179.9°
C33C34C35H21180.0°180.0°
C34C33N32NI21179.9°179.8°
C33C34C35C300.1°0.1°
C33C34C35H22179.9°179.9°
C34C35C30H22180.0°180.0°
C35C34C33H20179.7°179.9°
N15C14C13H124.3°60.0°
N15C14C13H13116.9°59.9°
C14N15C16H1411.9°30.1°
C14N15C16H15133.3°150.0°
C14N15C36H290.3°89.9°
C14N15C36H30120.3°30.0°
C14N15C36H31119.7°150.1°
O36C14N15C36180.0°180.0°
O36C14C13H12175.4°120.1°
O36C14C13H1363.4°120.0°
C02N08C05H2122.0°118.3°
N08C02N03H23175.8°179.8°
S07C09C04H1135.8°147.8°
C09S07C06H3143.3°83.8°
C09S07C06H497.0°152.9°
S07C09C10H627.2°48.3°
S07C09C10H7147.3°168.3°
C17C27C26C31179.8°179.9°
C27C17C16H1488.2°160.0°
C27C17C16H1533.3°40.1°
C27C17C18H16179.8°179.7°
C17C27C28H180.0°0.0°
NI21N32C31C260.2°0.1°
NI21N32C33H200.1°0.2°
N32NI21O24H2591.2°134.4°
N32NI21O25H2689.1°45.0°
C26C31C30C35179.9°180.0°
C35C30C29H190.1°0.2°
C30C35C34H21179.9°180.0°
C36N15C16H14167.9°150.0°
C36N15C16H1546.4°30.1°
N15C36H29H30120.0°120.0°
N15C36H29H31120.0°120.0°
N15C36H30H31120.0°120.0°
H1C04C05H20.2°0.1°
H1C04C09H519.7°30.2°
H1C04N03H2360.4°61.8°
H2C05C06H3111.5°29.8°
H2C05C06H48.2°93.5°
H2C05N08H2457.9°61.6°
H5C09C10H6145.3°171.8°
H5C09C10H794.6°68.2°
H6C10C11H8169.4°180.0°
H6C10C11H948.4°60.1°
H7C10C11H870.5°60.1°
H7C10C11H9168.5°180.0°
H8C11C12H10167.2°180.0°
H8C11C12H1147.2°59.9°
H9C11C12H1071.7°60.0°
H9C11C12H11168.3°179.9°
H10C12C13H1267.0°180.0°
H10C12C13H1354.1°59.9°
H11C12C13H12172.9°60.0°
H11C12C13H1365.9°180.0°
H16C18C19H170.1°0.1°
H18C28C29H190.5°0.1°
H20C33C34H210.3°0.1°
H21C34C35H220.0°0.0°
H29C36H30H31120.0°120.0°

251174

PDB entries from 2026-03-25

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