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A1IB4

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C4N9sing1.47Å1.46Å
C1'N9sing1.35Å1.43Å
C1'C2'sing1.51Å1.50Å
C2'C3'sing1.53Å1.52Å
C3'C4'sing1.53Å1.52Å
C4'NAAsing1.46Å1.48Å
NAAN3sing1.29Å1.31ÅAromatic
N3N2doub1.29Å1.30ÅAromatic
C2N2sing1.35Å1.35ÅAromatic
C2C7sing1.48Å1.48Å
C7C6doub1.39Å1.38ÅAromatic
C6C9sing1.38Å1.38ÅAromatic
C9F1sing1.35Å1.38Å
C7C10sing1.39Å1.39ÅAromatic
C10C11doub1.38Å1.39ÅAromatic
C11F2sing1.35Å1.37Å
C11C12sing1.39Å1.38ÅAromatic
C12F3sing1.35Å1.38Å
C2C13doub1.36Å1.38ÅAromatic
C3'O3'sing1.43Å1.43Å
C2'O2'sing1.43Å1.44Å
C14O2'sing1.43Å1.43Å
C14C15sing1.53Å1.53Å
C15OP3sing1.43Å1.43Å
C14C5'sing1.53Å1.54Å
C5'O5'sing1.43Å1.43Å
C1'O5doub1.21Å1.23Å
C8N9sing1.40Å1.41Å
C8C18sing1.39Å1.39ÅAromatic
C18C19doub1.38Å1.40ÅAromatic
C19CL1sing1.74Å1.80Å
C19C20sing1.38Å1.39ÅAromatic
C20C21doub1.38Å1.38ÅAromatic
C21CL2sing1.74Å1.81Å
C21C22sing1.38Å1.38ÅAromatic
C5'C4'sing1.53Å1.53Å
C22C8doub1.39Å1.39ÅAromatic
C13NAAsing1.35Å1.33ÅAromatic
C12C9doub1.39Å1.38ÅAromatic
C4H1sing1.09Å1.10Å
C4H3sing1.09Å1.10Å
C4H2sing1.09Å1.10Å
C6H7sing1.08Å1.08Å
C10H8sing1.08Å1.08Å
C13H9sing1.08Å1.08Å
C15H13sing1.09Å1.10Å
C15H12sing1.09Å1.10Å
C20H18sing1.08Å1.08Å
C22H19sing1.08Å1.08Å
C2'H4sing1.09Å1.10Å
C3'H5sing1.09Å1.10Å
C4'H6sing1.09Å1.10Å
O3'H10sing0.97Å0.95Å
C14H11sing1.09Å1.10Å
OP3H14sing0.97Å0.95Å
C5'H15sing1.09Å1.10Å
O5'H16sing0.97Å0.95Å
C18H17sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C4N9C1'120.7°120.0°
C4N9C8116.6°120.0°
N9C4H1109.5°109.5°
N9C4H3109.5°109.4°
N9C4H2109.5°109.4°
N9C1'C2'116.7°120.0°
N9C1'O5121.1°120.0°
C1'N9C8122.7°120.0°
C1'C2'C3'108.8°109.5°
C1'C2'O2'110.4°109.5°
C2'C1'O5122.2°120.0°
C1'C2'H4108.5°109.5°
C2'C3'C4'109.7°109.2°
C2'C3'O3'108.3°109.5°
C3'C2'O2'111.6°109.4°
C3'C2'H4108.2°109.4°
C2'C3'H5109.2°109.5°
C3'C4'NAA110.0°109.5°
C4'C3'O3'109.8°109.5°
C3'C4'C5'111.2°109.0°
C4'C3'H5109.3°109.6°
C3'C4'H6108.3°109.6°
C4'NAAN3114.1°125.8°
NAAC4'C5'110.4°109.5°
C4'NAAC13133.6°125.8°
NAAC4'H6108.8°109.6°
NAAN3N2107.9°110.6°
N3NAAC13112.2°108.4°
N3N2C2108.3°108.8°
N2C2C7124.3°126.9°
N2C2C13108.0°106.2°
C2C7C6118.8°120.0°
C2C7C10120.0°120.1°
C7C2C13127.3°126.9°
C7C6C9119.1°119.9°
C6C7C10121.1°119.8°
C7C6H7120.4°120.1°
C6C9F1120.3°120.0°
C6C9C12120.4°120.1°
C9C6H7120.5°120.0°
F1C9C12119.4°119.9°
C7C10C11118.8°120.0°
C7C10H8120.6°120.0°
C10C11F2121.0°120.0°
C10C11C12120.4°120.1°
C11C10H8120.6°120.0°
F2C11C12118.6°120.0°
C11C12F3119.5°119.9°
C11C12C9120.2°120.1°
F3C12C9120.2°119.9°
C2C13NAA103.5°106.1°
C2C13H9128.2°127.0°
O3'C3'H5110.6°109.6°
C3'O3'H10109.5°114.0°
C2'O2'C14116.5°114.1°
O2'C2'H4109.3°109.5°
O2'C14C15109.0°109.5°
O2'C14C5'108.4°109.4°
O2'C14H11109.9°109.5°
C14C15OP3109.1°109.5°
C15C14C5'112.3°109.5°
C14C15H13109.6°109.5°
C14C15H12109.6°109.5°
C15C14H11108.6°109.5°
OP3C15H13109.6°109.5°
OP3C15H12109.6°109.5°
C15OP3H14109.5°114.0°
C14C5'O5'110.1°109.5°
C14C5'C4'111.1°109.2°
C5'C14H11108.5°109.5°
C14C5'H15108.2°109.5°
O5'C5'C4'109.7°109.5°
O5'C5'H15109.5°109.5°
C5'O5'H16109.5°114.0°
N9C8C18121.5°120.0°
N9C8C22119.2°120.1°
C8C18C19119.0°119.9°
C18C8C22119.0°119.9°
C8C18H17120.5°120.0°
C18C19CL1119.9°119.9°
C18C19C20121.5°120.1°
C19C18H17120.5°120.1°
CL1C19C20118.6°120.0°
C19C20C21119.1°120.1°
C19C20H18120.5°120.0°
C20C21CL2120.2°120.0°
C20C21C22119.8°120.1°
C21C20H18120.4°119.9°
CL2C21C22119.7°119.9°
C21C22C8121.3°119.9°
C21C22H19119.4°120.1°
C5'C4'H6108.1°109.6°
C4'C5'H15108.2°109.6°
C8C22H19119.3°120.0°
NAAC13H9128.2°126.9°
H1C4H3109.5°109.5°
H1C4H2109.5°109.5°
H3C4H2109.4°109.5°
H13C15H12109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C4N9C1'C8178.9°179.9°
C4N9C1'C2'178.5°6.4°
C4N9C1'O50.7°173.5°
C4N9C8C1874.5°7.9°
C4N9C8C2299.1°172.4°
N9C4H1H3120.0°120.0°
N9C4H1H2120.0°119.9°
N9C4H3H2120.0°119.9°
N9C1'C2'O5179.2°180.0°
N9C1'C2'C3'150.9°84.4°
N9C1'C2'O2'86.4°155.6°
C1'N9C8C18106.5°172.1°
C1'N9C8C2279.9°7.6°
C1'N9C4H1180.0°95.1°
C1'N9C4H360.0°25.0°
C1'N9C4H260.0°144.9°
N9C1'C2'H433.4°35.6°
C1'C2'C3'O2'122.0°120.0°
C1'C2'C3'H4117.7°120.0°
C1'C2'C3'C4'174.4°177.6°
C1'C2'C3'O3'65.8°62.5°
C1'C2'O2'H4119.3°120.0°
C1'C2'O2'C14178.8°178.8°
C2'C1'N9C82.6°173.5°
C1'C2'C3'H554.7°57.7°
C2'C3'C4'O3'118.9°119.9°
C2'C3'C4'H5119.7°119.9°
C2'C3'C4'NAA175.3°176.8°
C2'C3'O3'H5119.6°120.1°
C3'C2'O2'H4119.7°120.0°
C3'C2'O2'C1457.7°61.2°
C3'C2'C1'O528.3°95.6°
C2'C3'C4'C5'52.6°57.0°
C2'C3'C4'H666.0°63.0°
C2'C3'O3'H10180.0°65.3°
C3'C4'NAAC5'123.1°119.5°
C3'C4'NAAH6118.4°120.2°
C3'C4'NAAN3122.3°145.0°
C4'C3'O3'H5120.7°120.2°
C4'C3'C2'O2'52.4°57.6°
C3'C4'C5'C1454.8°57.0°
C3'C4'C5'O5'67.1°62.9°
C3'C4'C5'H6118.7°119.9°
C3'C4'NAAC1361.4°34.9°
C4'C3'C2'H467.9°62.4°
C4'C3'O3'H1060.3°175.1°
C3'C4'C5'H15173.4°176.9°
C4'NAAN3C13177.1°179.9°
C4'NAAN3N2178.4°179.9°
C4'NAAC13C2178.5°180.0°
NAAC4'C3'O3'65.8°63.3°
NAAC4'C5'C14177.3°176.9°
NAAC4'C5'O5'55.3°56.9°
NAAC4'C5'H6118.9°120.2°
C4'NAAC13H91.5°0.0°
NAAC4'C3'H555.6°57.0°
NAAC4'C5'H1564.2°63.2°
NAAN3N2C20.2°0.0°
N3NAAC13C22.2°0.0°
N3NAAC4'C5'114.5°95.5°
N3NAAC13H9177.8°180.0°
N3NAAC4'H63.9°24.8°
N3N2C2C7175.6°180.0°
N3N2C2C131.6°0.0°
N2N3NAAC131.3°0.0°
N2C2C7C13172.8°180.0°
N2C2C7C619.6°0.0°
N2C2C7C10156.4°179.9°
N2C2C13NAA2.2°0.0°
N2C2C13H9177.8°180.0°
C2C7C6C10175.9°179.9°
C2C7C6C9178.0°179.9°
C2C7C10C11178.3°180.0°
C7C2C13NAA176.0°180.0°
C2C7C6H72.0°0.4°
C2C7C10H81.7°0.1°
C7C2C13H94.0°0.0°
C7C6C9H7180.0°179.7°
C7C6C9F1179.1°179.7°
C6C7C10C112.4°0.1°
C6C7C2C13167.6°180.0°
C7C6C9C120.7°0.2°
C6C7C10H8177.6°180.0°
C6C9F1C12179.8°180.0°
C9C6C7C102.1°0.0°
C6C9C12C110.4°0.5°
C6C9C12F3179.8°179.9°
F1C9C12C11179.8°179.5°
F1C9C12F30.4°0.0°
F1C9C6H70.9°0.0°
C7C10C11H8180.0°180.0°
C7C10C11F2178.9°179.9°
C7C10C11C121.4°0.3°
C10C7C2C1316.5°0.1°
C10C7C6H7177.9°179.8°
C10C11F2C12179.8°179.7°
C10C11C12F3179.4°180.0°
C10C11C12C90.0°0.5°
F2C11C12F30.3°0.3°
F2C11C12C9179.8°179.8°
F2C11C10H81.1°0.0°
C11C12F3C9179.4°179.5°
C12C11C10H8178.6°179.7°
C2C13NAAH9180.0°180.0°
O3'C3'C2'O2'172.2°177.5°
O3'C3'C4'C5'171.5°176.9°
O3'C3'C2'H451.9°57.5°
O3'C3'C4'H652.9°56.9°
C2'O2'C14C15179.9°178.9°
C2'O2'C14C5'57.5°61.2°
O2'C2'C1'O594.5°24.3°
O2'C2'C3'H567.3°62.3°
C2'O2'C14H1161.0°58.9°
O2'C14C15C5'120.1°119.9°
O2'C14C15H11119.8°120.0°
O2'C14C15OP358.6°65.0°
O2'C14C5'H11119.4°120.0°
O2'C14C5'O5'67.2°62.3°
O2'C14C5'C4'54.6°57.6°
O2'C14C15H13178.6°174.9°
O2'C14C15H1261.3°55.0°
C14O2'C2'H462.0°58.8°
O2'C14C5'H15173.2°177.6°
C14C15OP3H13119.9°120.0°
C14C15OP3H12119.9°120.0°
C15C14C5'H11120.2°120.0°
C15C14C5'O5'53.3°57.6°
C15C14C5'C4'175.1°177.6°
C14C15H13H12120.2°120.0°
C14C15OP3H14180.0°180.0°
C15C14C5'H1566.3°62.4°
OP3C15C14C5'178.8°175.1°
OP3C15H13H12120.2°120.0°
OP3C15C14H1161.2°55.0°
C14C5'O5'C4'122.6°119.7°
C14C5'O5'H15118.8°120.1°
C14C5'C4'H15118.6°119.9°
C5'C14C15H1361.3°55.0°
C5'C14C15H1258.8°64.9°
C14C5'C4'H663.9°62.9°
C14C5'O5'H16180.0°60.0°
O5'C5'C4'H15119.5°120.1°
O5'C5'C4'H6174.2°177.2°
O5'C5'C14H11173.5°177.7°
O5C1'N9C8178.2°6.5°
O5C1'C2'H4145.8°144.4°
N9C8C18C22173.6°179.7°
N9C8C18C19175.5°180.0°
N9C8C22C21179.3°180.0°
C8N9C4H11.0°84.9°
C8N9C4H3119.0°155.1°
C8N9C4H2121.0°35.1°
N9C8C22H190.7°0.0°
N9C8C18H174.5°0.1°
C8C18C19H17180.0°180.0°
C8C18C19CL1178.9°180.0°
C8C18C19C200.6°0.0°
C18C8C22C215.6°0.3°
C18C8C22H19174.4°179.7°
C18C19CL1C20178.4°180.0°
C18C19C20C210.4°0.2°
C19C18C8C222.0°0.3°
C18C19C20H18179.5°180.0°
CL1C19C20C21177.9°179.7°
CL1C19C20H182.1°0.0°
CL1C19C18H171.1°0.0°
C19C20C21H18180.0°179.8°
C19C20C21CL2176.9°179.8°
C19C20C21C224.0°0.2°
C20C19C18H17179.4°180.0°
C20C21CL2C22172.9°180.0°
C20C21C22C86.6°0.1°
C20C21C22H19173.3°180.0°
CL2C21C22C8179.6°179.9°
CL2C21C20H183.1°0.0°
CL2C21C22H190.4°0.0°
C21C22C8H19180.0°180.0°
C22C21C20H18176.0°180.0°
C5'C4'NAAC1361.8°84.6°
C5'C4'C3'H567.0°62.9°
C4'C5'C14H1164.8°62.4°
C4'C5'O5'H1657.4°179.7°
C22C8C18H17178.1°179.7°
C13NAAC4'H6179.8°155.1°
C12C9C6H7179.3°180.0°
H1C4H3H2120.0°120.1°
H13C15C14H1158.8°65.0°
H13C15OP3H1460.1°60.0°
H12C15C14H11178.9°175.0°
H12C15OP3H1460.1°60.0°
H4C2'C3'H5172.4°177.7°
H5C3'C4'H6174.4°177.2°
H5C3'O3'H1060.4°54.8°
H6C4'C5'H1554.7°57.0°
H11C14C5'H1553.8°57.6°
H15C5'O5'H1661.2°60.1°

250835

PDB entries from 2026-03-18

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