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A1H2P

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N2N4doub1.29Å1.31ÅAromatic
N2C11sing1.34Å1.35ÅAromatic
N4N3sing1.29Å1.30ÅAromatic
C11C1'sing1.51Å1.50Å
C11C28doub1.35Å1.37ÅAromatic
N3C4sing1.46Å1.47Å
N3C28sing1.35Å1.32ÅAromatic
C1'C2'sing1.53Å1.54Å
C4C7sing1.53Å1.51Å
C4C9sing1.53Å1.52Å
N7N8doub1.29Å1.31ÅAromatic
N7N6sing1.29Å1.31ÅAromatic
O3'C24sing1.43Å1.43Å
O3'C3'sing1.43Å1.42Å
C7CAAsing1.53Å1.51Å
N8C16sing1.34Å1.34ÅAromatic
CAANAAsing1.47Å1.46Å
C4'N6sing1.46Å1.47Å
C4'C3'sing1.53Å1.52Å
C4'C5'sing1.53Å1.52Å
C9C8sing1.53Å1.51Å
C2'C3'sing1.53Å1.53Å
C2'O2'sing1.43Å1.44Å
N6C23sing1.35Å1.32ÅAromatic
C8NAAsing1.47Å1.47Å
C25C5'sing1.53Å1.52Å
C25O2'sing1.43Å1.43Å
C25C26sing1.53Å1.52Å
C16C23doub1.36Å1.37ÅAromatic
C16C17sing1.48Å1.48Å
NAAC6sing1.35Å1.42Å
C5'O5'sing1.43Å1.44Å
C18C17doub1.39Å1.38ÅAromatic
C18C19sing1.38Å1.38ÅAromatic
F1C19sing1.35Å1.37Å
OP3C26sing1.43Å1.43Å
C17C20sing1.39Å1.39ÅAromatic
C19C22doub1.39Å1.38ÅAromatic
C6O6doub1.22Å1.22Å
C6N1sing1.35Å1.42Å
N1C2sing1.46Å1.46Å
C20C21doub1.38Å1.38ÅAromatic
C22C21sing1.39Å1.38ÅAromatic
C22F3sing1.35Å1.37Å
C1C2sing1.53Å1.54Å
C21F2sing1.35Å1.37Å
C2C3sing1.53Å1.54Å
C2CABsing1.53Å1.53Å
N1H10sing0.97Å1.00Å
C4H19sing1.09Å1.10Å
C7H14sing1.09Å1.10Å
C7H13sing1.09Å1.10Å
C8H16sing1.09Å1.10Å
C8H15sing1.09Å1.10Å
C20H26sing1.08Å1.08Å
C24H29sing1.09Å1.10Å
C24H30sing1.09Å1.10Å
C24H28sing1.09Å1.10Å
C26H32sing1.09Å1.10Å
C26H33sing1.09Å1.10Å
C28H37sing1.08Å1.08Å
C1H1sing1.09Å1.10Å
C1H2sing1.09Å1.10Å
C1H3sing1.09Å1.10Å
C3H6sing1.09Å1.10Å
C3H5sing1.09Å1.10Å
C3H4sing1.09Å1.10Å
CABH8sing1.09Å1.10Å
CABH9sing1.09Å1.10Å
CABH7sing1.09Å1.10Å
CAAH11sing1.09Å1.10Å
CAAH12sing1.09Å1.10Å
C9H18sing1.09Å1.10Å
C9H17sing1.09Å1.10Å
C1'H20sing1.09Å1.10Å
C1'H21sing1.09Å1.10Å
C2'H22sing1.09Å1.10Å
C3'H23sing1.09Å1.10Å
C4'H24sing1.09Å1.10Å
C18H25sing1.08Å1.08Å
C23H27sing1.08Å1.08Å
C25H31sing1.09Å1.10Å
OP3H34sing0.97Å0.95Å
C5'H35sing1.09Å1.10Å
O5'H36sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N4N2C11110.2°108.9°
N2N4N3107.1°110.2°
N2C11C1'119.9°126.8°
N2C11C28104.7°106.5°
N4N3C4120.9°125.9°
N4N3C28110.9°108.3°
C1'C11C28135.4°126.7°
C11C1'C2'112.1°109.5°
C11C1'H20108.8°109.5°
C11C1'H21108.8°109.5°
C11C28N3107.1°106.2°
C11C28H37126.4°126.9°
C4N3C28128.2°125.9°
N3C4C7109.7°109.5°
N3C4C9111.5°109.5°
N3C4H19109.0°109.5°
N3C28H37126.5°126.9°
C1'C2'C3'110.4°109.5°
C1'C2'O2'111.9°109.5°
C2'C1'H20108.8°109.4°
C2'C1'H21108.8°109.4°
C1'C2'H22107.7°109.4°
C7C4C9109.8°109.5°
C4C7CAA109.7°109.3°
C7C4H19108.5°109.4°
C4C7H14109.4°109.5°
C4C7H13109.4°109.5°
C4C9C8109.9°109.3°
C9C4H19108.4°109.5°
C4C9H18109.4°109.5°
C4C9H17109.4°109.5°
N8N7N6107.4°110.5°
N7N8C16109.1°108.8°
N7N6C4'116.6°125.8°
N7N6C23111.2°108.5°
C24O3'C3'114.4°114.0°
O3'C24H29109.5°109.5°
O3'C24H30109.5°109.5°
O3'C24H28109.5°109.5°
O3'C3'C4'108.8°109.6°
O3'C3'C2'110.6°109.5°
O3'C3'H23110.0°109.5°
C7CAANAA108.6°108.8°
CAAC7H14109.4°109.5°
CAAC7H13109.4°109.5°
C7CAAH11109.7°109.6°
C7CAAH12109.7°109.5°
N8C16C23107.0°106.2°
N8C16C17124.1°126.9°
CAANAAC8112.3°118.7°
CAANAAC6119.4°120.7°
NAACAAH11109.7°109.6°
NAACAAH12109.7°109.6°
N6C4'C3'111.2°109.6°
N6C4'C5'109.3°109.6°
C4'N6C23132.1°125.8°
N6C4'H24109.3°109.6°
C3'C4'C5'109.8°109.0°
C4'C3'C2'110.3°109.2°
C4'C3'H23108.6°109.5°
C3'C4'H24108.7°109.5°
C4'C5'C25110.3°109.2°
C4'C5'O5'109.6°109.5°
C5'C4'H24108.6°109.6°
C4'C5'H35108.7°109.5°
C9C8NAA110.0°108.7°
C9C8H16109.3°109.6°
C9C8H15109.4°109.7°
C8C9H18109.4°109.5°
C8C9H17109.4°109.5°
C3'C2'O2'109.7°109.4°
C3'C2'H22107.9°109.5°
C2'C3'H23108.6°109.5°
C2'O2'C25116.3°114.1°
O2'C2'H22109.0°109.5°
N6C23C16105.2°106.0°
N6C23H27127.4°126.9°
C8NAAC6122.4°120.6°
NAAC8H16109.3°109.6°
NAAC8H15109.4°109.6°
C5'C25O2'109.4°109.4°
C5'C25C26112.0°109.5°
C25C5'O5'109.6°109.5°
C5'C25H31108.6°109.5°
C25C5'H35108.7°109.6°
O2'C25C26108.4°109.5°
O2'C25H31109.8°109.5°
C25C26OP3109.2°109.5°
C25C26H32109.5°109.5°
C25C26H33109.6°109.5°
C26C25H31108.6°109.5°
C23C16C17128.9°126.8°
C16C23H27127.4°127.0°
C16C17C18119.7°120.1°
C16C17C20119.8°120.1°
NAAC6O6119.3°120.0°
NAAC6N1116.8°120.0°
O5'C5'H35109.9°109.6°
C5'O5'H36109.5°114.0°
C17C18C19119.6°119.9°
C18C17C20120.4°119.8°
C17C18H25120.2°120.0°
C18C19F1121.1°119.9°
C18C19C22120.5°120.1°
C19C18H25120.2°120.1°
F1C19C22118.5°120.0°
OP3C26H32109.5°109.5°
OP3C26H33109.5°109.5°
C26OP3H34109.5°114.0°
C17C20C21119.1°119.9°
C17C20H26120.5°120.0°
C19C22C21119.5°120.1°
C19C22F3120.1°119.9°
O6C6N1123.9°120.0°
C6N1C2123.6°120.0°
C6N1H10118.2°120.0°
N1C2C1108.3°109.5°
N1C2C3106.7°109.5°
N1C2CAB110.0°109.4°
C2N1H10118.2°120.0°
C20C21C22120.9°120.1°
C20C21F2119.4°120.0°
C21C20H26120.5°120.1°
C21C22F3120.3°119.9°
C22C21F2119.7°120.0°
C1C2C3110.6°109.5°
C1C2CAB110.7°109.4°
C2C1H1109.5°109.5°
C2C1H2109.5°109.5°
C2C1H3109.5°109.5°
C3C2CAB110.4°109.5°
C2C3H6109.5°109.5°
C2C3H5109.5°109.5°
C2C3H4109.5°109.4°
C2CABH8109.5°109.5°
C2CABH9109.5°109.5°
C2CABH7109.5°109.5°
H14C7H13109.4°109.6°
H16C8H15109.5°109.6°
H29C24H30109.5°109.4°
H29C24H28109.5°109.5°
H30C24H28109.4°109.5°
H32C26H33109.5°109.5°
H1C1H2109.4°109.5°
H1C1H3109.5°109.5°
H2C1H3109.5°109.5°
H6C3H5109.5°109.5°
H6C3H4109.5°109.5°
H5C3H4109.4°109.4°
H8CABH9109.5°109.5°
H8CABH7109.5°109.5°
H9CABH7109.5°109.5°
H11CAAH12109.5°109.7°
H18C9H17109.5°109.5°
H20C1'H21109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N4N2C11C1'180.0°180.0°
N4N2C11C280.6°0.0°
N2N4N3C4179.8°180.0°
N2N4N3C280.7°0.3°
C11N2N4N30.8°0.2°
N2C11C1'C28179.1°180.0°
N2C11C28N30.1°0.2°
N2C11C1'C2'170.9°55.0°
N2C11C28H37179.9°179.8°
N2C11C1'H2068.7°65.0°
N2C11C1'H2150.5°175.0°
N4N3C28C110.4°0.3°
N4N3C4C28179.4°179.6°
N4N3C4C7106.2°94.7°
N4N3C4C9132.0°145.3°
N4N3C4H1912.4°25.3°
N4N3C28H37179.6°179.7°
C1'C11C28N3179.4°179.8°
C11C1'C2'H20120.4°120.0°
C11C1'C2'H21120.4°120.0°
C11C1'C2'C3'173.0°175.0°
C11C1'C2'O2'50.5°65.0°
C1'C11C28H370.6°0.2°
C11C1'H20H21118.8°120.1°
C11C1'C2'H2269.4°55.0°
C11C28N3C4179.8°180.0°
C11C28N3H37180.0°180.0°
C28C11C1'C2'8.3°125.0°
C28C11C1'H20112.1°115.0°
C28C11C1'H21128.6°5.0°
N3C4C7C9122.8°120.0°
N3C4C7H19118.9°120.0°
N3C4C9H19120.0°120.0°
N3C4C7CAA178.4°178.6°
N3C4C9C8178.2°178.6°
N3C4C7H1458.4°58.7°
N3C4C7H1361.5°61.4°
C4N3C28H370.2°0.0°
N3C4C9H1858.1°61.4°
N3C4C9H1761.7°58.6°
C28N3C4C773.1°85.0°
C28N3C4C948.6°35.1°
C28N3C4H19168.3°155.1°
C1'C2'C3'O3'51.0°57.6°
C1'C2'C3'C4'69.4°62.4°
C1'C2'C3'O2'123.8°120.0°
C1'C2'C3'H22117.5°120.0°
C1'C2'O2'H22119.1°120.0°
C1'C2'O2'C2565.6°58.8°
C2'C1'H20H21118.8°120.0°
C1'C2'C3'H23171.7°177.7°
C7C4C9H19118.3°120.0°
C4C7CAAH14120.1°119.9°
C4C7CAAH13120.1°119.9°
C4C7CAANAA59.9°54.7°
C7C4C9C856.5°61.4°
C4C7H14H13119.9°120.1°
C4C7CAAH1159.9°65.2°
C4C7CAAH12179.8°174.4°
C7C4C9H1863.6°58.6°
C7C4C9H17176.6°178.7°
C9C4C7CAA58.8°61.4°
C4C9C8H18120.1°120.0°
C4C9C8H17120.0°119.9°
C4C9C8NAA55.9°54.7°
C9C4C7H14178.9°178.7°
C9C4C7H1361.2°58.6°
C4C9C8H16176.0°65.1°
C4C9C8H1564.2°174.5°
C4C9H18H17119.8°120.1°
N8N7N6C4'178.3°179.9°
N8N7N6C230.7°0.2°
N7N8C16C230.9°0.3°
N7N8C16C17178.9°180.0°
N6N7N8C160.2°0.0°
N7N6C4'C23177.0°179.7°
N7N6C4'C3'126.3°94.7°
N7N6C4'C5'112.4°145.7°
N7N6C23C161.2°0.4°
N7N6C4'H246.4°25.5°
N7N6C23H27178.8°179.8°
C24O3'C3'C4'157.2°150.3°
C24O3'C3'C2'81.5°90.0°
O3'C24H29H30120.0°120.0°
O3'C24H29H28120.0°120.0°
O3'C24H30H28120.0°120.0°
C24O3'C3'H2338.4°30.1°
O3'C3'C4'N661.9°63.2°
O3'C3'C4'C2'121.4°120.0°
O3'C3'C4'H23119.7°120.1°
O3'C3'C4'C5'177.1°176.9°
O3'C3'C2'H23120.7°120.1°
O3'C3'C2'O2'174.7°177.6°
C3'O3'C24H29180.0°60.0°
C3'O3'C24H3060.0°180.0°
C3'O3'C24H2860.0°60.0°
O3'C3'C2'H2266.6°62.4°
O3'C3'C4'H2458.5°57.0°
C7CAANAAH11119.8°119.8°
C7CAANAAH12119.9°119.7°
C7CAANAAC860.9°53.7°
C7CAANAAC6145.3°126.4°
CAAC7C4H1959.5°58.6°
CAAC7H14H13119.9°120.1°
C7CAAH11H12120.4°120.3°
N8C16C23N61.3°0.4°
N8C16C23C17177.8°179.8°
N8C16C17C1819.7°179.7°
N8C16C17C20157.6°0.0°
N8C16C23H27178.8°179.8°
CAANAAC8C959.3°53.6°
CAANAAC8C6152.9°180.0°
CAANAAC6O613.1°175.0°
CAANAAC6N1166.4°5.1°
NAACAAC7H14180.0°174.6°
NAACAAC7H1360.1°65.3°
CAANAAC8H16179.4°66.1°
CAANAAC8H1560.8°173.5°
NAACAAH11H12120.4°120.4°
N6C4'C3'C5'121.0°119.9°
N6C4'C3'H24120.3°120.2°
N6C4'C5'H24119.2°120.3°
N6C4'C3'C2'176.7°176.8°
N6C4'C5'C25178.6°176.9°
C4'N6C23C16178.3°179.9°
N6C4'C5'O5'57.7°57.0°
N6C4'C3'H2357.9°57.0°
C4'N6C23H271.7°0.1°
N6C4'C5'H3562.4°63.2°
C3'C4'C5'H24118.7°119.8°
C4'C3'C2'H23118.9°119.9°
C4'C3'C2'O2'54.3°57.6°
C3'C4'N6C2356.7°85.0°
C3'C4'C5'C2556.4°56.9°
C3'C4'C5'O5'64.4°62.9°
C4'C3'C2'H22173.0°177.6°
C3'C4'C5'H35175.5°176.9°
C5'C4'C3'C2'55.7°56.9°
C5'C4'N6C2364.6°34.6°
C4'C5'C25O5'120.8°119.9°
C4'C5'C25H35119.0°119.9°
C4'C5'C25O2'55.6°57.6°
C4'C5'C25C26175.8°177.6°
C4'C5'O5'H35119.4°120.1°
C5'C4'C3'H2363.2°63.0°
C4'C5'C25H3164.3°62.4°
C4'C5'O5'H36180.0°180.0°
C9C8NAAH16120.1°119.8°
C9C8NAAH15120.1°119.9°
C9C8NAAC6147.8°126.4°
C8C9C4H1961.8°58.5°
C9C8H16H15119.8°120.5°
C8C9H18H17119.8°120.1°
C3'C2'O2'H22118.0°120.0°
C3'C2'O2'C2557.3°61.1°
C3'C2'C1'H2052.6°65.0°
C3'C2'C1'H2166.6°55.0°
C2'C3'C4'H2463.0°62.9°
C2'O2'C25C5'57.9°61.2°
C2'O2'C25C26179.7°178.9°
O2'C2'C1'H2069.9°55.0°
O2'C2'C1'H21170.9°174.9°
O2'C2'C3'H2364.5°62.3°
C2'O2'C25H3161.2°58.8°
N6C23C16H27180.0°179.8°
N6C23C16C17179.1°179.8°
C23N6C4'H24176.7°154.8°
C8NAAC6O6164.1°5.0°
C8NAAC6N115.4°175.0°
NAAC8H16H15119.8°120.3°
C8NAACAAH1158.9°66.1°
C8NAACAAH12179.2°173.4°
NAAC8C9H1864.1°65.3°
NAAC8C9H17176.0°174.6°
C5'C25O2'C26122.4°120.0°
C5'C25O2'H31119.1°120.0°
C5'C25C26H31119.9°120.0°
C25C5'O5'H35119.4°120.2°
C5'C25C26OP3173.0°175.0°
C5'C25C26H3253.1°55.0°
C5'C25C26H3367.0°65.0°
C25C5'C4'H2462.3°62.9°
C25C5'O5'H3658.7°60.4°
O2'C25C26H31119.3°120.0°
O2'C25C5'O5'65.3°62.3°
O2'C25C26OP366.2°65.1°
O2'C25C26H32173.9°174.9°
O2'C25C26H3353.8°54.9°
C25O2'C2'H22175.3°178.8°
O2'C25C5'H35174.6°177.5°
C26C25C5'O5'55.0°57.7°
C25C26OP3H32120.0°120.0°
C25C26OP3H33120.0°120.0°
C25C26H32H33120.1°120.0°
C25C26OP3H34180.0°180.0°
C26C25C5'H3565.2°62.5°
C23C16C17C18162.8°0.6°
C23C16C17C2019.9°179.7°
C16C17C18C20177.3°179.8°
C16C17C18C19178.8°179.8°
C16C17C20C21178.6°180.0°
C16C17C20H261.4°0.0°
C16C17C18H251.2°0.3°
C17C16C23H270.9°0.0°
NAAC6O6N1179.5°180.0°
NAAC6N1C2179.2°175.0°
NAAC6N1H100.8°5.3°
C6NAAC8H1627.7°113.8°
C6NAAC8H1592.1°6.5°
C6NAACAAH1194.9°113.8°
C6NAACAAH1225.4°6.6°
O5'C5'C4'H24176.9°177.2°
O5'C5'C25H31174.9°177.8°
C17C18C19H25180.0°179.5°
C17C18C19F1178.8°180.0°
C17C18C19C220.9°0.4°
C18C17C20C211.3°0.2°
C18C17C20H26178.7°179.7°
C18C19F1C22179.7°179.6°
C19C18C17C201.5°0.4°
C18C19C22C210.1°0.1°
C18C19C22F3179.9°179.7°
F1C19C22C21179.6°179.7°
F1C19C22F30.4°0.1°
F1C19C18H251.2°0.5°
OP3C26H32H33120.1°120.0°
OP3C26C25H3153.1°55.0°
C17C20C21H26180.0°179.9°
C17C20C21C220.5°0.1°
C17C20C21F2179.7°180.0°
C20C17C18H25178.5°179.9°
C19C22C21C200.1°0.1°
C19C22C21F3180.0°179.9°
C19C22C21F2179.7°180.0°
C22C19C18H25179.1°179.9°
O6C6N1C20.3°4.9°
O6C6N1H10179.7°174.7°
C6N1C2H10180.0°179.6°
C6N1C2C162.0°59.7°
C6N1C2C3178.8°179.7°
C6N1C2CAB59.1°60.3°
N1C2C1C3116.6°120.1°
N1C2C1CAB120.7°119.9°
N1C2C3CAB119.5°120.0°
N1C2C1H1180.0°60.1°
N1C2C1H260.0°180.0°
N1C2C1H360.0°60.0°
N1C2C3H6180.0°59.9°
N1C2C3H560.0°180.0°
N1C2C3H460.0°60.1°
N1C2CABH8180.0°60.0°
N1C2CABH960.0°180.0°
N1C2CABH760.0°60.0°
C20C21C22F2179.8°179.9°
C20C21C22F3179.9°179.9°
C22C21C20H26179.5°180.0°
F3C22C21F20.3°0.1°
C1C2C3CAB122.9°120.0°
C1C2N1H10118.0°120.0°
C2C1H1H2120.0°120.0°
C2C1H1H3120.0°120.0°
C2C1H2H3120.0°120.0°
C1C2C3H662.4°180.0°
C1C2C3H5177.5°59.9°
C1C2C3H457.6°60.0°
C1C2CABH860.3°60.0°
C1C2CABH959.6°60.0°
C1C2CABH7179.6°180.0°
F2C21C20H260.3°0.1°
C3C2N1H101.2°0.1°
C3C2C1H163.4°60.0°
C3C2C1H256.6°60.0°
C3C2C1H3176.6°180.0°
C2C3H6H5120.0°120.0°
C2C3H6H4120.0°120.0°
C2C3H5H4120.0°119.9°
C3C2CABH862.5°180.0°
C3C2CABH9177.5°60.0°
C3C2CABH757.5°60.0°
CABC2N1H10120.9°120.1°
CABC2C1H159.4°180.0°
CABC2C1H2179.3°60.0°
CABC2C1H360.7°60.0°
CABC2C3H660.5°60.0°
CABC2C3H559.5°60.0°
CABC2C3H4179.5°180.0°
C2CABH8H9120.0°120.0°
C2CABH8H7120.0°120.0°
C2CABH9H7120.0°120.0°
H19C4C7H1460.5°61.3°
H19C4C7H13179.6°178.5°
H19C4C9H18178.1°178.5°
H19C4C9H1758.2°61.4°
H14C7CAAH1160.1°54.8°
H14C7CAAH1260.1°65.6°
H13C7CAAH11180.0°174.9°
H13C7CAAH1259.7°54.5°
H16C8C9H1855.9°174.9°
H16C8C9H1764.0°54.8°
H15C8C9H18175.8°54.5°
H15C8C9H1755.9°65.6°
H29C24H30H28120.0°120.0°
H32C26C25H3166.8°65.0°
H32C26OP3H3460.0°60.0°
H33C26C25H31173.1°175.0°
H33C26OP3H3460.0°60.0°
H1C1H2H3120.0°120.0°
H6C3H5H4120.0°120.0°
H8CABH9H7120.0°120.0°
H20C1'C2'H22170.3°175.0°
H21C1'C2'H2251.0°65.1°
H22C2'C3'H2354.1°57.7°
H23C3'C4'H24178.2°177.2°
H24C4'C5'H3556.8°57.1°
H31C25C5'H3554.8°57.5°
H35C5'O5'H3660.7°59.8°

249697

PDB entries from 2026-02-25

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