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A1H20

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
NCAsing1.47Å1.48Å
CACBsing1.53Å1.59Å
CACsing1.51Å1.57Å
CBCGsing1.51Å1.55Å
CGOD1doub1.21Å1.23Å
CGND2sing1.35Å1.36Å
ND2C1Dsing1.46Å1.45Å
COdoub1.21Å1.26Å
COXTsing1.34Å1.27Å
O2BPBdoub1.48Å1.58Å
PBO1Bsing1.61Å1.56Å
PBO5Dsing1.61Å1.60Å
PBO3Asing1.61Å1.59Å
O5DC5Dsing1.43Å1.43Å
C5DC4Dsing1.53Å1.54Å
C4DC3Dsing1.54Å1.51Å
C4DO4Dsing1.44Å1.41Å
C3DO3Dsing1.43Å1.49Å
C3DC2Dsing1.55Å1.44Å
C2DO2Dsing1.43Å1.42Å
C2DC1Dsing1.55Å1.49Å
O4DC1Dsing1.44Å1.41Å
O3APAsing1.61Å1.52Å
PAO1Adoub1.48Å1.54Å
PAO2Asing1.61Å1.50Å
PAO5'sing1.61Å1.58Å
O5'C5'sing1.43Å1.48Å
C5'C4'sing1.53Å1.48Å
C4'C3'sing1.54Å1.57Å
C4'O4'sing1.44Å1.40Å
C3'O3'sing1.43Å1.39Å
C3'C2'sing1.55Å1.52Å
C2'O2'sing1.43Å1.42Å
C2'C1'sing1.55Å1.47Å
O4'C1'sing1.44Å1.47Å
C1'N9sing1.47Å1.48Å
N9C4sing1.37Å1.40ÅAromatic
N9C8sing1.36Å1.33ÅAromatic
C4N3doub1.33Å1.35ÅAromatic
C4C5sing1.40Å1.45ÅAromatic
N3C2sing1.32Å1.34ÅAromatic
C2N1doub1.32Å1.37ÅAromatic
C8N7doub1.30Å1.41ÅAromatic
N7C5sing1.35Å1.36ÅAromatic
C5C6doub1.40Å1.42ÅAromatic
C6N1sing1.33Å1.34ÅAromatic
C6N6sing1.38Å1.34Å
C8H8sing1.08Å1.08Å
NH3sing1.01Å1.00Å
NH2sing1.01Å1.00Å
C2H21sing1.08Å1.08Å
N6HN6Asing0.97Å1.00Å
N6HN6sing0.97Å1.00Å
CAHAsing1.09Å1.10Å
CBHB3sing1.09Å1.10Å
CBHB2sing1.09Å1.10Å
ND2HD22sing0.97Å1.00Å
OXTH1sing0.97Å0.95Å
O1BH4sing0.97Å0.95Å
C5DH5Dsing1.09Å1.10Å
C5DH5DAsing1.09Å1.10Å
C4DH4Dsing1.09Å1.10Å
C3DH3Dsing1.09Å1.10Å
O3DHO3Dsing0.97Å0.95Å
C2DH2Dsing1.09Å1.10Å
O2DHO2Dsing0.97Å0.95Å
C1DH1Dsing1.09Å1.10Å
O2AH5sing0.97Å0.95Å
C5'H5'sing1.09Å1.10Å
C5'H5'Asing1.09Å1.10Å
C4'H4'sing1.09Å1.10Å
C3'H3'sing1.09Å1.10Å
O3'HO3'sing0.97Å0.95Å
C2'H2'sing1.09Å1.10Å
O2'HO2'sing0.97Å0.95Å
C1'H1'sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
NCACB118.1°109.5°
NCAC103.8°109.5°
CANH3109.5°111.1°
CANH2109.5°111.1°
NCAHA104.9°109.4°
CBCAC120.5°109.5°
CACBCG121.3°109.5°
CBCAHA103.8°109.5°
CACBHB3106.4°109.5°
CACBHB2106.5°109.5°
CACO122.6°120.0°
CACOXT113.5°120.0°
CCAHA104.0°109.5°
CBCGOD1129.4°120.0°
CBCGND2112.2°120.0°
CGCBHB3106.4°109.5°
CGCBHB2106.4°109.5°
OD1CGND2118.3°120.0°
CGND2C1D128.3°120.0°
CGND2HD22115.9°120.0°
ND2C1DC2D113.7°110.6°
ND2C1DO4D109.4°110.6°
C1DND2HD22115.8°120.0°
ND2C1DH1D111.3°110.6°
OCOXT123.3°120.0°
COXTH1109.5°117.0°
O2BPBO1B106.6°109.5°
O2BPBO5D99.9°109.4°
O2BPBO3A103.4°109.5°
O1BPBO5D121.7°109.5°
O1BPBO3A122.6°109.5°
PBO1BH4109.5°114.1°
O5DPBO3A99.3°109.5°
PBO5DC5D123.0°123.0°
PBO3APA132.0°134.0°
O5DC5DC4D106.2°109.5°
O5DC5DH5D110.3°109.5°
O5DC5DH5DA110.3°109.5°
C5DC4DC3D111.5°109.9°
C5DC4DO4D122.6°109.9°
C4DC5DH5D110.3°109.5°
C4DC5DH5DA110.3°109.5°
C5DC4DH4D106.5°109.8°
C3DC4DO4D100.4°107.3°
C4DC3DO3D114.2°110.5°
C4DC3DC2D101.0°104.2°
C3DC4DH4D106.9°109.9°
C4DC3DH3D112.5°110.5°
C4DO4DC1D115.7°106.9°
O4DC4DH4D108.1°110.0°
O3DC3DC2D101.5°110.5°
O3DC3DH3D112.8°110.4°
C3DO3DHO3D109.5°114.0°
C3DC2DO2D100.6°110.9°
C3DC2DC1D108.4°102.1°
C2DC3DH3D113.7°110.6°
C3DC2DH2D109.3°110.9°
O2DC2DC1D119.4°110.9°
O2DC2DH2D109.7°110.9°
C2DO2DHO2D109.5°113.9°
C2DC1DO4D99.4°103.5°
C1DC2DH2D108.7°111.0°
C2DC1DH1D110.7°110.6°
O4DC1DH1D111.8°110.8°
O3APAO1A103.2°109.4°
O3APAO2A102.0°109.4°
O3APAO5'113.7°109.5°
O1APAO2A111.8°109.5°
O1APAO5'115.4°109.5°
O2APAO5'109.8°109.5°
PAO2AH5109.5°114.0°
PAO5'C5'118.5°123.0°
O5'C5'C4'110.8°109.5°
O5'C5'H5'109.1°109.5°
O5'C5'H5'A109.1°109.5°
C5'C4'C3'119.3°110.4°
C5'C4'O4'103.8°110.4°
C4'C5'H5'109.1°109.4°
C4'C5'H5'A109.1°109.5°
C5'C4'H4'109.2°110.3°
C3'C4'O4'105.6°104.8°
C4'C3'O3'109.2°110.5°
C4'C3'C2'109.9°104.1°
C3'C4'H4'108.2°110.4°
C4'C3'H3'109.1°110.5°
C4'O4'C1'104.2°105.3°
O4'C4'H4'110.5°110.5°
O3'C3'C2'107.3°110.5°
O3'C3'H3'111.6°110.4°
C3'O3'HO3'109.5°114.0°
C3'C2'O2'112.7°110.5°
C3'C2'C1'96.2°104.0°
C2'C3'H3'109.7°110.6°
C3'C2'H2'109.7°110.6°
O2'C2'C1'116.0°110.5°
O2'C2'H2'111.0°110.5°
C2'O2'HO2'109.5°114.0°
C2'C1'O4'114.0°104.8°
C2'C1'N9116.1°110.4°
C1'C2'H2'110.4°110.6°
C2'C1'H1'106.6°110.4°
O4'C1'N9106.5°110.4°
O4'C1'H1'106.6°110.4°
C1'N9C4117.3°126.3°
C1'N9C8133.1°126.3°
N9C1'H1'106.5°110.4°
C4N9C8109.6°107.5°
N9C4N3132.3°134.9°
N9C4C5106.5°106.0°
N9C8N7108.1°110.0°
N9C8H8126.0°125.1°
N3C4C5121.0°119.1°
C4N3C2113.7°120.6°
C4C5N7105.8°107.1°
C4C5C6119.5°118.2°
N3C2N1129.9°122.5°
N3C2H21115.0°118.8°
C2N1C6117.4°121.2°
N1C2H21115.1°118.8°
C8N7C5109.8°109.4°
N7C8H8125.9°125.0°
N7C5C6134.4°134.7°
C5C6N1118.3°118.4°
C5C6N6120.3°120.8°
N1C6N6121.3°120.7°
C6N6HN6A109.5°120.0°
C6N6HN6109.5°120.0°
H3NH2109.5°111.0°
HN6AN6HN6109.5°120.0°
HB3CBHB2109.5°109.5°
H5DC5DH5DA109.5°109.5°
H5'C5'H5'A109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
NCACBC128.8°120.0°
NCACBHA115.5°119.9°
NCACHA109.5°120.0°
NCACBCG56.3°65.0°
NCACO26.4°20.0°
NCACOXT162.8°160.0°
CANH3H2120.0°124.0°
NCACBHB365.3°55.0°
NCACBHB2178.0°175.0°
CBCACHA115.6°120.0°
CACBCGHB3121.6°120.0°
CACBCGHB2121.7°120.0°
CACBCGOD156.9°0.0°
CACBCGND2120.8°180.0°
CBCACO161.4°100.0°
CBCACOXT27.9°80.0°
CBCANH3180.0°60.0°
CBCANH260.0°63.9°
CACBHB3HB2114.7°120.0°
CCACBCG174.9°175.0°
CACOOXT169.9°180.0°
CCANH343.8°60.0°
CCANH276.2°176.0°
CCACBHB363.5°65.0°
CCACBHB253.2°55.0°
CACOXTH1170.7°180.0°
CBCGOD1ND2177.6°179.9°
CBCGND2C1D177.3°180.0°
CGCBCAHA59.2°55.0°
CGCBHB3HB2114.7°120.0°
CBCGND2HD222.8°0.0°
OD1CGND2C1D0.7°0.1°
OD1CGCBHB3178.5°120.0°
OD1CGCBHB264.8°120.0°
OD1CGND2HD22179.3°180.0°
CGND2C1DHD22180.0°180.0°
CGND2C1DC2D151.8°140.0°
CGND2C1DO4D98.0°105.9°
ND2CGCBHB30.8°60.0°
ND2CGCBHB2117.5°60.0°
CGND2C1DH1D26.0°17.2°
ND2C1DO4DC4D120.0°158.6°
ND2C1DC2DC3D92.1°155.6°
ND2C1DC2DO2D22.3°37.4°
ND2C1DC2DO4D116.2°118.5°
ND2C1DC2DH1D126.1°122.8°
ND2C1DO4DH1D123.7°123.0°
ND2C1DC2DH2D149.1°86.3°
OCCAHA83.1°139.9°
OCOXTH10.0°0.0°
OXTCCAHA87.7°40.0°
O2BPBO1BO5D113.3°120.0°
O2BPBO1BO3A118.5°120.0°
O2BPBO5DO3A105.5°120.0°
O2BPBO5DC5D47.9°55.0°
O2BPBO3APA154.1°40.0°
O2BPBO1BH40.0°179.9°
O1BPBO5DO3A137.9°120.0°
O1BPBO5DC5D164.5°65.0°
O1BPBO3APA34.1°80.0°
PBO5DC5DC4D168.7°180.0°
O5DPBO3APA103.3°160.0°
O5DPBO1BH4113.3°60.0°
PBO5DC5DH5D49.1°60.0°
PBO5DC5DH5DA71.8°60.0°
O3APBO5DC5D57.6°175.0°
PBO3APAO1A43.8°45.0°
PBO3APAO2A159.9°75.0°
PBO3APAO5'82.0°165.0°
O3APBO1BH4118.5°60.0°
O5DC5DC4DH5D119.5°120.0°
O5DC5DC4DH5DA119.5°120.0°
O5DC5DC4DC3D170.6°175.0°
O5DC5DC4DO4D70.6°67.1°
O5DC5DH5DH5DA121.5°120.0°
O5DC5DC4DH4D54.4°54.0°
C5DC4DC3DO4D131.3°119.5°
C5DC4DC3DH4D116.0°121.0°
C5DC4DO4DH4D124.3°121.0°
C5DC4DC3DO3D155.8°123.9°
C5DC4DC3DC2D96.1°117.4°
C5DC4DO4DC1D101.1°92.9°
C4DC5DH5DH5DA121.5°120.0°
C5DC4DC3DH3D25.5°1.4°
C3DC4DO4DH4D111.7°119.5°
C4DC3DO3DC2D107.8°114.7°
C4DC3DO3DH3D130.2°122.6°
C4DC3DC2DH3D120.7°118.7°
C4DC3DC2DO2D164.1°97.3°
C4DC3DC2DC1D38.0°20.9°
C3DC4DO4DC1D22.9°26.6°
C3DC4DC5DH5D69.9°65.0°
C3DC4DC5DH5DA51.1°55.0°
C4DC3DO3DHO3D180.0°180.0°
C4DC3DC2DH2D80.4°139.1°
O4DC4DC3DO3D72.9°116.6°
O4DC4DC3DC2D35.2°2.1°
C4DO4DC1DC2D0.6°40.1°
O4DC4DC5DH5D48.9°52.9°
O4DC4DC5DH5DA169.9°172.9°
O4DC4DC3DH3D156.8°120.9°
C4DO4DC1DH1D116.3°78.4°
O3DC3DC2DH3D121.4°122.6°
O3DC3DC2DO2D46.3°21.4°
O3DC3DC2DC1D79.8°139.6°
O3DC3DC4DH4D39.8°3.0°
O3DC3DC2DH2D161.8°102.2°
C3DC2DO2DC1D118.4°112.7°
C3DC2DO2DH2D115.2°123.6°
C3DC2DC1DH2D118.8°118.2°
C3DC2DC1DO4D24.1°37.0°
C2DC3DC4DH4D147.9°121.6°
C2DC3DO3DHO3D72.2°65.2°
C3DC2DO2DHO2D180.0°180.0°
C3DC2DC1DH1D141.8°81.6°
O2DC2DC1DH2D126.9°123.7°
O2DC2DC1DO4D138.4°81.1°
O2DC2DC3DH3D75.1°144.0°
O2DC2DC1DH1D103.9°160.2°
C2DC1DO4DH1D116.9°118.5°
C2DC1DND2HD2228.2°40.0°
C1DC2DC3DH3D158.7°97.9°
C1DC2DO2DHO2D61.6°67.3°
O4DC1DND2HD2282.0°74.0°
C1DO4DC4DH4D134.6°146.1°
O4DC1DC2DH2D94.7°155.2°
O3APAO1AO2A108.8°120.0°
O3APAO1AO5'124.7°120.0°
O3APAO2AO5'120.9°120.0°
O3APAO5'C5'53.2°175.0°
O3APAO2AH5109.6°60.0°
O1APAO2AO5'129.5°120.1°
O1APAO5'C5'172.2°55.0°
O1APAO2AH50.0°180.0°
O2APAO5'C5'60.3°65.0°
PAO5'C5'C4'156.7°180.0°
O5'PAO2AH5129.5°60.0°
PAO5'C5'H5'83.1°60.0°
PAO5'C5'H5'A36.5°59.9°
O5'C5'C4'H5'120.2°120.0°
O5'C5'C4'H5'A120.2°120.1°
O5'C5'C4'C3'16.7°175.0°
O5'C5'C4'O4'100.3°69.6°
O5'C5'H5'H5'A119.4°120.0°
O5'C5'C4'H4'141.9°52.8°
C5'C4'C3'O4'116.1°118.9°
C5'C4'C3'H4'125.6°122.2°
C5'C4'O4'H4'117.0°122.3°
C5'C4'C3'O3'129.6°98.5°
C5'C4'C3'C2'112.9°142.8°
C5'C4'O4'C1'141.8°159.4°
C4'C5'H5'H5'A119.4°120.0°
C5'C4'C3'H3'7.5°24.0°
C3'C4'O4'H4'116.8°118.9°
C4'C3'O3'C2'119.1°114.7°
C4'C3'O3'H3'120.6°122.6°
C4'C3'C2'H3'119.9°118.7°
C4'C3'C2'O2'141.6°118.6°
C4'C3'C2'C1'20.0°0.0°
C3'C4'O4'C1'15.6°40.5°
C3'C4'C5'H5'103.5°65.0°
C3'C4'C5'H5'A136.9°55.0°
C4'C3'O3'HO3'180.0°180.0°
C4'C3'C2'H2'94.2°118.8°
O4'C4'C3'O3'114.2°142.7°
O4'C4'C3'C2'3.3°24.0°
C4'O4'C1'C2'32.4°40.5°
C4'O4'C1'N9161.8°159.4°
O4'C4'C5'H5'139.5°50.4°
O4'C4'C5'H5'A19.9°170.3°
O4'C4'C3'H3'123.6°94.8°
C4'O4'C1'H1'84.9°78.3°
O3'C3'C2'H3'121.4°122.6°
O3'C3'C2'O2'22.9°0.1°
O3'C3'C2'C1'98.6°118.7°
O3'C3'C4'H4'4.0°23.7°
O3'C3'C2'H2'147.1°122.5°
C3'C2'O2'C1'109.5°114.6°
C3'C2'O2'H2'123.4°122.7°
C3'C2'C1'H2'113.6°118.7°
C3'C2'C1'O4'31.9°24.0°
C3'C2'C1'N9156.2°142.8°
C2'C3'C4'H4'121.5°95.0°
C2'C3'O3'HO3'60.9°65.3°
C3'C2'O2'HO2'180.0°61.5°
C3'C2'C1'H1'85.4°94.8°
O2'C2'C1'H2'127.4°122.7°
O2'C2'C1'O4'150.9°142.6°
O2'C2'C1'N984.8°98.6°
O2'C2'C3'H3'98.5°122.7°
O2'C2'C1'H1'33.6°23.8°
C2'C1'O4'N9129.3°118.8°
C2'C1'O4'H1'117.3°118.8°
C2'C1'N9H1'118.5°122.3°
C2'C1'N9C4146.9°85.0°
C2'C1'N9C832.4°95.1°
C1'C2'C3'H3'139.9°118.7°
C1'C2'O2'HO2'70.5°176.1°
O4'C1'N9H1'113.4°122.3°
O4'C1'N9C485.1°159.6°
O4'C1'N9C895.6°20.3°
C1'O4'C4'H4'101.2°78.4°
O4'C1'C2'H2'81.7°94.7°
C1'N9C4C8179.5°179.9°
C1'N9C4N34.7°0.0°
C1'N9C4C5178.4°179.7°
C1'N9C8N7178.6°179.7°
C1'N9C8H81.5°0.1°
N9C1'C2'H2'42.6°24.1°
N9C4N3C5173.0°179.7°
N9C4N3C2177.1°179.7°
C4N9C8N70.8°0.3°
N9C4C5N74.2°0.2°
N9C4C5C6179.0°179.8°
C4N9C8H8179.2°179.8°
C4N9C1'H1'28.4°37.3°
C8N9C4N3175.9°180.0°
C8N9C4C52.1°0.3°
N9C8N7H8180.0°179.8°
N9C8N7C53.6°0.2°
C8N9C1'H1'150.9°142.6°
C4N3C2N11.4°0.0°
N3C4C5N7178.8°180.0°
N3C4C5C66.4°0.0°
C4N3C2H21178.6°180.0°
C5C4N3C24.1°0.0°
C4C5N7C84.8°0.0°
C4C5N7C6173.6°180.0°
C4C5C6N15.4°0.0°
C4C5C6N6178.2°180.0°
N3C2N1H21180.0°180.0°
N3C2N1C60.6°0.0°
C2N1C6C52.7°0.0°
C2N1C6N6178.9°180.0°
C8N7C5C6178.4°180.0°
N7C5C6N1178.4°180.0°
N7C5C6N65.3°0.0°
C5N7C8H8176.4°180.0°
C5C6N1N6176.3°180.0°
C5C6N6HN6A176.2°0.0°
C5C6N6HN656.2°180.0°
C6N1C2H21179.4°180.0°
N1C6N6HN6A0.0°179.9°
N1C6N6HN6120.0°0.0°
C6N6HN6AHN6120.0°180.0°
H3NCAHA65.0°180.0°
H2NCAHA175.0°56.0°
HACACBHB3179.1°174.9°
HACACBHB262.4°65.1°
HD22ND2C1DH1D154.0°162.8°
H5DC5DC4DH4D173.9°174.0°
H5DAC5DC4DH4D65.1°66.0°
H4DC4DC3DH3D90.6°119.6°
H3DC3DO3DHO3D49.9°57.4°
H3DC3DC2DH2D40.3°20.4°
H2DC2DO2DHO2D64.8°56.4°
H2DC2DC1DH1D23.0°36.5°
H5'C5'C4'H4'21.6°172.8°
H5'AC5'C4'H4'98.0°67.3°
H4'C4'C3'H3'118.1°146.2°
H3'C3'O3'HO3'59.4°57.4°
H3'C3'C2'H2'25.7°0.0°
H2'C2'O2'HO2'56.6°61.1°
H2'C2'C1'H1'161.0°146.4°

248636

PDB entries from 2026-02-04

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