Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

A1EMD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CALCAFdoub1.36Å1.41ÅAromatic
CALCBBsing1.40Å1.41ÅAromatic
CAFCAGsing1.39Å1.41ÅAromatic
CANCBBdoub1.41Å1.40ÅAromatic
CANCAKsing1.36Å1.41ÅAromatic
CBBCBCsing1.42Å1.43ÅAromatic
CAKCAXdoub1.41Å1.41ÅAromatic
CAGCAMdoub1.36Å1.41ÅAromatic
CBCCAMsing1.41Å1.41ÅAromatic
CBCCAPdoub1.40Å1.41ÅAromatic
CAXCAPsing1.39Å1.41ÅAromatic
CAXCAVsing1.48Å1.41Å
NASCAVsing1.35Å1.35Å
NASCAZsing1.39Å1.34Å
CAVOACdoub1.22Å1.24Å
NAQCAZdoub1.30Å1.34ÅAromatic
NAQNARsing1.26Å1.19ÅAromatic
CAZSAUsing1.76Å1.71ÅAromatic
NARCBAdoub1.29Å1.34ÅAromatic
SAUCBAsing1.76Å1.67ÅAromatic
CBASBEsing1.76Å1.75Å
OAESBEdoub1.42Å1.51Å
CAICAHdoub1.38Å1.40ÅAromatic
CAICAWsing1.39Å1.41ÅAromatic
SBENATsing1.66Å1.64Å
SBEOADdoub1.42Å1.53Å
CAHCAJsing1.38Å1.39ÅAromatic
NATCAWsing1.40Å1.34Å
CAWCAOdoub1.39Å1.41ÅAromatic
CAJCAYdoub1.39Å1.42ÅAromatic
CAOCAYsing1.39Å1.43ÅAromatic
CAYNBDsing1.40Å1.36Å
NBDCABsing1.47Å1.48Å
NBDCAAsing1.47Å1.48Å
CAAH1sing1.09Å1.10Å
CAAH2sing1.09Å1.10Å
CAAH3sing1.09Å1.10Å
CABH4sing1.09Å1.10Å
CABH5sing1.09Å1.10Å
CABH6sing1.09Å1.10Å
CAFH7sing1.08Å1.08Å
CAGH8sing1.08Å1.08Å
CAHH9sing1.08Å1.08Å
CAIH10sing1.08Å1.08Å
CAJH11sing1.08Å1.08Å
CAKH12sing1.08Å1.08Å
CALH13sing1.08Å1.08Å
CAMH14sing1.08Å1.08Å
CANH15sing1.08Å1.08Å
CAOH16sing1.08Å1.08Å
CAPH17sing1.08Å1.08Å
NASH18sing0.97Å1.00Å
NATH19sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CAFCALCBB119.8°119.8°
CALCAFCAG120.5°121.0°
CALCAFH7119.8°119.5°
CAFCALH13120.1°120.1°
CALCBBCAN119.7°121.1°
CALCBBCBC119.9°119.3°
CBBCALH13120.1°120.1°
CAFCAGCAM120.0°120.9°
CAGCAFH7119.8°119.5°
CAFCAGH8120.0°119.5°
CBBCANCAK119.6°120.1°
CANCBBCBC120.4°119.7°
CBBCANH15120.2°120.0°
CANCAKCAX120.1°120.8°
CANCAKH12119.9°119.6°
CAKCANH15120.2°120.0°
CBBCBCCAM119.8°119.3°
CBBCBCCAP120.1°119.5°
CAKCAXCAP120.8°120.5°
CAKCAXCAV120.1°119.7°
CAXCAKH12119.9°119.6°
CAGCAMCBC120.1°119.7°
CAMCAGH8120.0°119.5°
CAGCAMH14120.0°120.2°
CAMCBCCAP120.2°121.2°
CBCCAMH14120.0°120.2°
CBCCAPCAX118.9°119.5°
CBCCAPH17120.5°120.3°
CAPCAXCAV118.9°119.8°
CAXCAPH17120.6°120.3°
CAXCAVNAS119.1°120.0°
CAXCAVOAC115.5°120.0°
CAVNASCAZ119.2°120.0°
NASCAVOAC125.4°120.0°
CAVNASH18120.4°120.0°
NASCAZNAQ122.5°126.1°
NASCAZSAU130.2°126.2°
CAZNASH18120.4°120.0°
CAZNAQNAR117.5°117.6°
NAQCAZSAU107.2°107.7°
NAQNARCBA116.1°117.9°
CAZSAUCBA90.0°88.9°
NARCBASAU109.2°107.9°
NARCBASBE130.8°126.1°
SAUCBASBE120.0°126.1°
CBASBEOAE108.1°106.4°
CBASBENAT110.7°107.3°
CBASBEOAD104.2°106.4°
OAESBENAT113.1°106.4°
OAESBEOAD110.0°123.1°
CAHCAICAW121.5°120.1°
CAICAHCAJ119.0°120.1°
CAICAHH9120.5°119.9°
CAHCAIH10119.3°119.9°
CAICAWNAT124.9°120.0°
CAICAWCAO119.0°119.9°
CAWCAIH10119.3°120.0°
NATSBEOAD110.4°106.4°
SBENATCAW119.1°120.0°
SBENATH19107.0°120.0°
CAHCAJCAY121.9°120.1°
CAJCAHH9120.5°120.0°
CAHCAJH11119.1°119.9°
NATCAWCAO116.1°120.1°
CAWNATH19107.0°120.0°
CAWCAOCAY120.5°119.9°
CAWCAOH16119.7°120.0°
CAJCAYCAO118.2°119.9°
CAJCAYNBD122.4°120.1°
CAYCAJH11119.1°119.9°
CAOCAYNBD119.5°120.0°
CAYCAOH16119.8°120.1°
CAYNBDCAB120.7°120.0°
CAYNBDCAA121.6°120.0°
CABNBDCAA117.6°120.0°
NBDCABH4109.5°109.4°
NBDCABH5109.4°109.5°
NBDCABH6109.5°109.4°
NBDCAAH1109.5°109.5°
NBDCAAH2109.5°109.4°
NBDCAAH3109.4°109.5°
H1CAAH2109.5°109.5°
H1CAAH3109.5°109.5°
H2CAAH3109.5°109.5°
H4CABH5109.5°109.5°
H4CABH6109.5°109.5°
H5CABH6109.5°109.6°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CAFCALCBBH13180.0°180.0°
CALCAFCAGH7180.0°179.7°
CAFCALCBBCAN179.4°180.0°
CAFCALCBBCBC0.0°0.5°
CALCAFCAGCAM0.3°0.4°
CALCAFCAGH8179.8°179.7°
CBBCALCAFCAG0.4°0.1°
CALCBBCANCBC179.4°179.5°
CALCBBCANCAK180.0°180.0°
CALCBBCBCCAM0.4°0.8°
CALCBBCBCCAP179.9°180.0°
CBBCALCAFH7179.6°179.7°
CALCBBCANH150.0°0.0°
CAFCAGCAMH8180.0°179.9°
CAFCAGCAMCBC0.2°0.1°
CAGCAFCALH13179.6°179.9°
CAFCAGCAMH14179.8°179.9°
CBBCANCAKH15180.0°180.0°
CBBCANCAKCAX0.5°0.0°
CANCBBCBCCAM179.8°179.7°
CANCBBCBCCAP0.7°0.5°
CBBCANCAKH12179.4°179.5°
CANCBBCALH130.6°0.0°
CAKCANCBBCBC0.6°0.5°
CANCAKCAXH12180.0°179.4°
CANCAKCAXCAP1.7°0.6°
CANCAKCAXCAV177.4°180.0°
CBBCBCCAMCAG0.5°0.5°
CBBCBCCAMCAP179.4°179.3°
CBBCBCCAPCAX0.4°0.0°
CBCCBBCALH13180.0°179.5°
CBBCBCCAMH14179.4°179.5°
CBCCBBCANH15179.4°179.5°
CBBCBCCAPH17179.6°180.0°
CAKCAXCAPCBC1.6°0.5°
CAKCAXCAPCAV175.8°179.5°
CAKCAXCAVNAS38.3°0.0°
CAKCAXCAVOAC139.5°180.0°
CAXCAKCANH15179.4°180.0°
CAKCAXCAPH17178.4°179.5°
CAGCAMCBCH14180.0°180.0°
CAGCAMCBCCAP180.0°179.8°
CAMCAGCAFH7179.8°180.0°
CAMCBCCAPCAX179.0°179.2°
CBCCAMCAGH8179.8°180.0°
CAMCBCCAPH171.0°0.8°
CBCCAPCAXH17180.0°180.0°
CBCCAPCAXCAV177.4°180.0°
CAPCBCCAMH140.0°0.2°
CAPCAXCAVNAS145.8°179.5°
CAPCAXCAVOAC36.4°0.5°
CAPCAXCAKH12178.3°180.0°
CAXCAVNASOAC177.6°180.0°
CAXCAVNASCAZ176.4°180.0°
CAVCAXCAKH122.5°0.6°
CAVCAXCAPH172.6°0.0°
CAXCAVNASH183.6°0.1°
CAVNASCAZH18180.0°179.9°
CAVNASCAZNAQ177.4°0.3°
CAVNASCAZSAU0.2°180.0°
CAZNASCAVOAC1.2°0.0°
NASCAZNAQSAU177.8°179.7°
NASCAZNAQNAR178.9°179.7°
NASCAZSAUCBA178.7°179.7°
OACCAVNASH18178.8°180.0°
CAZNAQNARCBA0.4°0.0°
NAQCAZSAUCBA1.1°0.0°
NAQCAZNASH182.5°179.7°
NARNAQCAZSAU1.1°0.0°
NAQNARCBASAU0.5°0.0°
NAQNARCBASBE178.2°180.0°
CAZSAUCBANAR0.9°0.0°
CAZSAUCBASBE178.9°180.0°
SAUCAZNASH18179.8°0.1°
NARCBASAUSBE177.9°179.9°
NARCBASBEOAE61.3°83.6°
NARCBASBENAT63.1°30.0°
NARCBASBEOAD178.3°143.5°
SAUCBASBEOAE116.1°96.5°
SAUCBASBENAT119.5°150.0°
SAUCBASBEOAD0.9°36.4°
CBASBEOAENAT122.9°114.1°
CBASBEOAEOAD113.2°122.9°
CBASBENATOAD114.9°113.6°
CBASBENATCAW63.3°65.0°
CBASBENATH19175.4°114.9°
OAESBENATOAD123.7°132.9°
OAESBENATCAW175.3°178.5°
OAESBENATH1953.9°1.4°
CAHCAICAWH10180.0°180.0°
CAICAHCAJH9180.0°179.7°
CAHCAICAWNAT179.2°179.9°
CAHCAICAWCAO0.8°0.0°
CAICAHCAJCAY0.6°0.3°
CAICAHCAJH11179.4°179.7°
CAICAWNATSBE81.6°45.1°
CAWCAICAHCAJ0.0°0.0°
CAICAWNATCAO178.5°180.0°
CAICAWCAOCAY0.9°0.3°
CAWCAICAHH9179.9°179.7°
CAICAWCAOH16179.1°179.7°
CAICAWNATH19157.0°135.1°
SBENATCAWH19121.4°179.9°
SBENATCAWCAO96.9°135.0°
OADSBENATCAW51.6°48.6°
OADSBENATH1969.8°131.5°
CAHCAJCAYH11180.0°180.0°
CAHCAJCAYCAO0.4°0.6°
CAHCAJCAYNBD179.7°180.0°
CAJCAHCAIH10180.0°180.0°
NATCAWCAOCAY179.5°179.6°
NATCAWCAIH100.8°0.1°
NATCAWCAOH160.5°0.3°
CAWCAOCAYCAJ0.4°0.6°
CAWCAOCAYH16180.0°179.4°
CAWCAOCAYNBD179.0°180.0°
CAOCAWCAIH10179.2°180.0°
CAOCAWNATH1924.5°44.9°
CAJCAYCAONBD179.3°179.4°
CAJCAYNBDCAB2.9°0.0°
CAJCAYNBDCAA179.5°180.0°
CAYCAJCAHH9179.5°180.0°
CAJCAYCAOH16179.6°180.0°
CAOCAYNBDCAB176.4°179.4°
CAOCAYNBDCAA1.2°0.6°
CAOCAYCAJH11179.6°179.4°
CAYNBDCABCAA177.7°180.0°
CAYNBDCAAH1180.0°60.0°
CAYNBDCAAH260.0°180.0°
CAYNBDCAAH360.0°60.0°
CAYNBDCABH4180.0°90.0°
CAYNBDCABH560.0°150.0°
CAYNBDCABH660.0°29.9°
NBDCAYCAJH110.3°0.0°
NBDCAYCAOH161.0°0.6°
CABNBDCAAH12.3°120.0°
CABNBDCAAH2122.3°0.0°
CABNBDCAAH3117.7°120.0°
NBDCABH4H5120.0°120.0°
NBDCABH4H6120.0°119.9°
NBDCABH5H6120.0°120.0°
NBDCAAH1H2120.0°119.9°
NBDCAAH1H3120.0°120.1°
NBDCAAH2H3120.0°120.0°
CAANBDCABH42.3°90.0°
CAANBDCABH5117.7°30.0°
CAANBDCABH6122.3°150.0°
H1CAAH2H3120.0°120.0°
H4CABH5H6120.0°120.1°
H7CAFCAGH80.2°0.0°
H7CAFCALH130.4°0.3°
H8CAGCAMH140.3°0.0°
H9CAHCAIH100.1°0.3°
H9CAHCAJH110.5°0.0°
H12CAKCANH150.6°0.6°

250835

PDB entries from 2026-03-18

PDB statisticsPDBj update infoContact PDBjnumon