Loading
PDBj
English日本語简体中文繁體中文한국어
✖
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
SummaryGeometryRelated PDB entries

A1EKG

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C03C04doub1.38Å1.39ÅAromatic
C03C02sing1.39Å1.37ÅAromatic
C04C07sing1.38Å1.38ÅAromatic
O01C02sing1.36Å1.40Å
C02C05doub1.39Å1.40ÅAromatic
C07C08sing1.51Å1.53Å
C07C06doub1.38Å1.43ÅAromatic
C08N09sing1.47Å1.47Å
C05C06sing1.38Å1.41ÅAromatic
C16C15sing1.53Å1.52Å
C16N11sing1.47Å1.46Å
C15O14sing1.43Å1.41Å
C27C26doub1.38Å1.42ÅAromatic
C27C20sing1.38Å1.41ÅAromatic
N09C18sing1.47Å1.50Å
N09C10sing1.35Å1.50Å
C19C18sing1.53Å1.55Å
C19C20sing1.51Å1.55Å
O14C13sing1.43Å1.42Å
C26C23sing1.39Å1.41ÅAromatic
N11C10sing1.35Å1.49Å
N11C12sing1.47Å1.53Å
C20C21doub1.38Å1.41ÅAromatic
C10O17doub1.22Å1.24Å
C13C12sing1.53Å1.59Å
C23O24sing1.36Å1.42Å
C23C22doub1.39Å1.40ÅAromatic
C21C22sing1.38Å1.41ÅAromatic
O24C25sing1.43Å1.44Å
C12H1sing1.09Å1.10Å
C12H2sing1.09Å1.10Å
C13H3sing1.09Å1.10Å
C13H4sing1.09Å1.10Å
C15H5sing1.09Å1.10Å
C15H6sing1.09Å1.10Å
C16H7sing1.09Å1.10Å
C16H8sing1.09Å1.10Å
C18H9sing1.09Å1.10Å
C18H10sing1.09Å1.10Å
C19H11sing1.09Å1.10Å
C19H12sing1.09Å1.10Å
C21H13sing1.08Å1.08Å
C22H14sing1.08Å1.08Å
C03H15sing1.08Å1.08Å
C04H16sing1.08Å1.08Å
C05H17sing1.08Å1.08Å
C06H18sing1.08Å1.08Å
C08H19sing1.09Å1.10Å
C08H20sing1.09Å1.10Å
C25H21sing1.09Å1.10Å
C25H22sing1.09Å1.10Å
C25H23sing1.09Å1.10Å
C26H24sing1.08Å1.08Å
C27H25sing1.08Å1.08Å
O01H26sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C04C03C02120.3°119.9°
C03C04C07122.6°120.1°
C04C03H15119.9°120.0°
C03C04H16118.7°119.9°
C03C02O01118.6°120.0°
C03C02C05121.0°119.9°
C02C03H15119.8°120.1°
C04C07C08119.4°120.0°
C04C07C06116.3°120.0°
C07C04H16118.7°120.0°
O01C02C05120.4°120.1°
C02O01H26109.5°114.0°
C02C05C06117.8°119.9°
C02C05H17121.1°120.0°
C08C07C06124.3°120.0°
C07C08N09115.5°109.5°
C07C08H19108.0°109.5°
C07C08H20107.9°109.5°
C07C06C05122.1°120.1°
C07C06H18118.9°119.9°
C08N09C18116.8°120.0°
C08N09C10123.6°120.0°
N09C08H19108.0°109.5°
N09C08H20108.0°109.4°
C06C05H17121.1°120.1°
C05C06H18119.0°120.0°
C15C16N11112.9°108.4°
C16C15O14114.2°109.2°
C16C15H5108.3°109.6°
C16C15H6108.3°109.5°
C15C16H7108.6°109.7°
C15C16H8108.6°109.7°
C16N11C10129.4°121.0°
C16N11C12104.4°118.1°
N11C16H7108.6°109.7°
N11C16H8108.6°109.7°
C15O14C13113.9°114.2°
O14C15H5108.3°109.5°
O14C15H6108.3°109.5°
C26C27C20122.3°120.0°
C27C26C23120.4°120.0°
C27C26H24119.8°120.0°
C26C27H25118.8°120.0°
C27C20C19123.1°119.9°
C27C20C21115.3°120.1°
C20C27H25118.9°120.0°
C18N09C10119.6°120.0°
N09C18C19113.9°109.4°
N09C18H9108.3°109.5°
N09C18H10108.4°109.5°
N09C10N11131.9°120.0°
N09C10O17113.7°120.0°
C18C19C20116.3°109.4°
C19C18H9108.3°109.5°
C19C18H10108.3°109.5°
C18C19H11107.8°109.5°
C18C19H12107.8°109.5°
C19C20C21121.5°119.9°
C20C19H11107.7°109.5°
C20C19H12107.7°109.5°
O14C13C12112.4°109.3°
O14C13H3108.7°109.5°
O14C13H4108.7°109.6°
C26C23O24121.3°120.1°
C26C23C22118.6°119.9°
C23C26H24119.8°120.0°
C10N11C12126.2°121.0°
N11C10O17114.4°120.0°
N11C12C13114.9°108.4°
N11C12H1108.1°109.7°
N11C12H2108.1°109.7°
C20C21C22123.4°120.0°
C20C21H13118.3°119.9°
C13C12H1108.1°109.6°
C13C12H2108.1°109.7°
C12C13H3108.7°109.5°
C12C13H4108.7°109.5°
O24C23C22120.1°120.0°
C23O24C25117.7°117.0°
C23C22C21120.0°120.0°
C23C22H14120.0°120.0°
C22C21H13118.3°120.0°
C21C22H14120.0°120.0°
O24C25H21109.5°109.5°
O24C25H22109.5°109.5°
O24C25H23109.5°109.4°
H1C12H2109.5°109.7°
H3C13H4109.5°109.5°
H5C15H6109.4°109.5°
H7C16H8109.5°109.7°
H9C18H10109.5°109.5°
H11C19H12109.5°109.5°
H19C08H20109.4°109.5°
H21C25H22109.4°109.5°
H21C25H23109.5°109.5°
H22C25H23109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C04C03C02H15180.0°180.0°
C03C04C07H16180.0°180.0°
C04C03C02O01179.4°179.7°
C04C03C02C050.7°0.0°
C03C04C07C08178.9°179.9°
C03C04C07C060.2°0.0°
C02C03C04C070.4°0.0°
C03C02O01C05179.9°179.7°
C03C02C05C060.6°0.0°
C02C03C04H16179.5°179.9°
C03C02C05H17179.4°180.0°
C03C02O01H26180.0°89.7°
C04C07C08C06178.6°179.9°
C04C07C08N09163.5°86.3°
C04C07C06C050.2°0.0°
C07C04C03H15179.6°180.0°
C04C07C06H18179.8°180.0°
C04C07C08H1975.6°153.7°
C04C07C08H2042.6°33.7°
O01C02C05C06179.4°179.7°
O01C02C03H150.6°0.3°
O01C02C05H170.6°0.3°
C02C05C06C070.4°0.0°
C02C05C06H17180.0°180.0°
C05C02C03H15179.3°180.0°
C02C05C06H18179.6°180.0°
C05C02O01H260.1°90.0°
C07C08N09H19120.9°120.0°
C07C08N09H20120.9°120.0°
C08C07C06C05178.8°180.0°
C07C08N09C1879.0°93.3°
C07C08N09C10101.4°86.7°
C08C07C04H161.1°0.1°
C08C07C06H181.2°0.0°
C07C08H19H20117.2°120.0°
C06C07C08N0915.1°93.8°
C07C06C05H18180.0°180.0°
C06C07C04H16179.8°180.0°
C07C06C05H17179.6°180.0°
C06C07C08H19105.8°26.2°
C06C07C08H20136.0°146.2°
C08N09C18C10179.6°180.0°
C08N09C18C1974.0°68.6°
C08N09C10N110.0°166.1°
C08N09C10O17179.8°13.9°
C08N09C18H9165.4°51.4°
C08N09C18H1046.7°171.4°
N09C08H19H20117.3°120.0°
C15C16N11H7120.5°119.7°
C15C16N11H8120.5°119.7°
C16C15O14H5120.7°120.0°
C16C15O14H6120.7°119.9°
C16C15O14C1312.1°62.5°
C15C16N11C10117.0°129.5°
C15C16N11C1264.2°50.5°
C16C15H5H6117.9°120.2°
C15C16H7H8118.5°120.5°
N11C16C15O1450.9°52.3°
C16N11C10N091.1°159.5°
C16N11C10C12178.5°180.0°
C16N11C10O17179.1°20.5°
C16N11C12C1322.3°50.5°
C16N11C12H1143.1°69.2°
C16N11C12H298.5°170.3°
N11C16C15H5171.5°172.2°
N11C16C15H669.9°67.6°
N11C16H7H8118.4°120.5°
C15O14C13C1251.7°62.6°
C15O14C13H368.7°57.3°
C15O14C13H4172.1°177.4°
O14C15H5H6117.9°120.1°
O14C15C16H7171.4°172.0°
O14C15C16H869.6°67.5°
C26C27C20H25180.0°179.4°
C26C27C20C19179.8°179.7°
C27C26C23H24180.0°179.7°
C26C27C20C210.7°0.6°
C27C26C23O24179.5°179.7°
C27C26C23C220.2°0.3°
C27C20C19C18147.3°90.3°
C27C20C19C21179.1°179.7°
C20C27C26C230.4°0.6°
C27C20C21C220.7°0.4°
C27C20C19H1191.7°149.7°
C27C20C19H1226.3°29.7°
C27C20C21H13179.3°179.7°
C20C27C26H24179.5°179.7°
N09C18C19H9120.6°120.0°
N09C18C19H10120.7°120.0°
N09C18C19C2066.4°180.0°
C18N09C10N11179.6°13.9°
C18N09C10O170.7°166.1°
N09C18H9H10118.0°120.0°
N09C18C19H11172.6°60.0°
N09C18C19H1254.6°60.0°
C18N09C08H1941.9°26.8°
C18N09C08H20160.2°146.7°
C10N09C18C19105.6°111.4°
N09C10N11O17179.8°180.0°
N09C10N11C12179.6°20.5°
C10N09C18H915.1°128.6°
C10N09C18H10133.8°8.6°
C10N09C08H19137.7°153.2°
C10N09C08H2019.4°33.3°
C18C19C20H11121.0°120.0°
C18C19C20H12121.0°120.0°
C18C19C20C2133.5°90.0°
C19C18H9H10118.0°120.0°
C18C19H11H12116.9°120.0°
C19C20C21C22179.9°180.0°
C20C19C18H954.2°60.0°
C20C19C18H10172.9°60.0°
C20C19H11H12116.9°120.0°
C19C20C21H130.1°0.1°
C19C20C27H250.2°0.3°
O14C13C12N1133.8°52.3°
O14C13C12H3120.4°120.0°
O14C13C12H4120.4°120.0°
O14C13C12H187.0°67.4°
O14C13C12H2154.6°172.0°
O14C13H3H4118.7°120.2°
C13O14C15H5108.6°177.5°
C13O14C15H6132.8°57.4°
C26C23O24C22179.7°179.9°
C26C23C22C210.2°0.1°
C26C23O24C25130.7°0.0°
C26C23C22H14179.7°180.0°
C23C26C27H25179.6°180.0°
C10N11C12C13158.9°129.5°
C10N11C12H138.1°110.8°
C10N11C12H280.3°9.7°
C10N11C16H73.5°9.8°
C10N11C16H8122.5°110.8°
C12N11C10O170.7°159.5°
N11C12C13H1120.8°119.7°
N11C12C13H2120.8°119.8°
N11C12H1H2117.6°120.6°
N11C12C13H386.6°67.7°
N11C12C13H4154.2°172.3°
C12N11C16H7175.2°170.2°
C12N11C16H856.3°69.2°
C20C21C22C230.5°0.1°
C20C21C22H13180.0°179.9°
C21C20C19H1187.5°30.0°
C21C20C19H12154.5°150.0°
C20C21C22H14179.4°180.0°
C21C20C27H25179.3°180.0°
C13C12H1H2117.5°120.5°
C12C13H3H4118.7°120.0°
O24C23C22C21179.5°180.0°
O24C23C22H140.5°0.1°
C23O24C25H21180.0°180.0°
C23O24C25H2260.0°60.0°
C23O24C25H2360.0°60.0°
O24C23C26H240.5°0.0°
C23C22C21H14180.0°179.9°
C22C23O24C2549.0°180.0°
C23C22C21H13179.5°180.0°
C22C23C26H24179.8°180.0°
O24C25H21H22120.0°120.0°
O24C25H21H23120.0°120.0°
O24C25H22H23120.0°120.0°
H1C12C13H3152.6°172.6°
H1C12C13H433.4°52.6°
H2C12C13H334.2°52.1°
H2C12C13H485.0°67.9°
H5C15C16H767.9°68.0°
H5C15C16H851.1°52.5°
H6C15C16H750.6°52.1°
H6C15C16H8169.7°172.6°
H9C18C19H1166.7°60.0°
H9C18C19H12175.2°180.0°
H10C18C19H1152.0°180.0°
H10C18C19H1266.1°60.0°
H13C21C22H140.5°0.1°
H15C03C04H160.5°0.0°
H17C05C06H180.4°0.0°
H21C25H22H23120.0°120.0°
H24C26C27H250.5°0.3°

250835

PDB entries from 2026-03-18

PDB statisticsPDBj update infoContact PDBjnumon