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SummaryGeometryRelated PDB entries

A1EFZ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
CAXNAWdoub1.31Å1.33ÅAromatic
CAXNATsing1.35Å1.33ÅAromatic
NAWCAVsing1.34Å1.32ÅAromatic
CASNATsing1.47Å1.54Å
CASCAPsing1.51Å1.43Å
NATCAUsing1.37Å1.34ÅAromatic
CBBOBAsing1.43Å1.43Å
OBACAOsing1.36Å1.36Å
CAVCAUdoub1.35Å1.33ÅAromatic
CAPCAOdoub1.39Å1.40ÅAromatic
CAPCAQsing1.39Å1.40ÅAromatic
CAOCANsing1.39Å1.40ÅAromatic
OAYCAQsing1.36Å1.35Å
OAYCAZsing1.43Å1.43Å
CAQCARdoub1.39Å1.42ÅAromatic
CANCAMdoub1.39Å1.41ÅAromatic
CARCAMsing1.39Å1.40ÅAromatic
CAMCAIsing1.48Å1.34Å
CAICAHsing1.39Å1.33ÅAromatic
CAICAEdoub1.41Å1.35ÅAromatic
CAHCAGdoub1.39Å1.34ÅAromatic
CBCCAKsing1.53Å1.50Å
CAKCAJsing1.51Å1.53Å
CAECAFsing1.40Å1.34ÅAromatic
CAENADsing1.37Å1.35ÅAromatic
CAGCAJsing1.40Å1.36Å
CAGNADsing1.38Å1.35ÅAromatic
CAFCAAdoub1.36Å1.39ÅAromatic
CAJOALdoub1.22Å1.24Å
NADCACsing1.36Å1.43ÅAromatic
CAACABsing1.40Å1.38ÅAromatic
CACCABdoub1.35Å1.38ÅAromatic
CBCH1sing1.09Å1.10Å
CBCH2sing1.09Å1.10Å
CBCH3sing1.09Å1.10Å
CAKH4sing1.09Å1.10Å
CAKH5sing1.09Å1.10Å
CAHH6sing1.08Å1.08Å
CACH7sing1.08Å1.08Å
CABH8sing1.08Å1.08Å
CAAH9sing1.08Å1.08Å
CAFH10sing1.08Å1.08Å
CARH11sing1.08Å1.08Å
CAZH12sing1.09Å1.10Å
CAZH13sing1.09Å1.10Å
CAZH14sing1.09Å1.10Å
CANH15sing1.08Å1.08Å
CBBH16sing1.09Å1.10Å
CBBH17sing1.09Å1.10Å
CBBH18sing1.09Å1.10Å
CASH19sing1.09Å1.10Å
CASH20sing1.09Å1.10Å
CAUH21sing1.08Å1.08Å
CAVH22sing1.08Å1.08Å
CAXH23sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
NAWCAXNAT108.8°108.7°
CAXNAWCAV108.3°109.2°
NAWCAXH23125.6°125.6°
CAXNATCAS124.2°126.4°
CAXNATCAU106.2°107.2°
NATCAXH23125.6°125.7°
NAWCAVCAU107.2°108.0°
NAWCAVH22126.4°126.0°
NATCASCAP114.8°109.5°
CASNATCAU129.6°126.4°
NATCASH19108.1°109.4°
NATCASH20108.1°109.5°
CASCAPCAO121.0°119.9°
CASCAPCAQ122.3°119.9°
CAPCASH19108.1°109.5°
CAPCASH20108.1°109.5°
NATCAUCAV109.5°106.8°
NATCAUH21125.2°126.6°
CBBOBACAO121.3°117.0°
OBACBBH16109.5°109.5°
OBACBBH17109.5°109.5°
OBACBBH18109.4°109.5°
OBACAOCAP114.7°119.9°
OBACAOCAN123.6°119.9°
CAVCAUH21125.3°126.6°
CAUCAVH22126.4°126.0°
CAOCAPCAQ116.7°120.1°
CAPCAOCAN121.7°120.1°
CAPCAQOAY115.7°120.0°
CAPCAQCAR122.2°120.1°
CAOCANCAM122.0°119.9°
CAOCANH15119.0°120.0°
CAQOAYCAZ115.5°117.0°
OAYCAQCAR122.2°120.0°
OAYCAZH12109.5°109.5°
OAYCAZH13109.5°109.5°
OAYCAZH14109.5°109.5°
CAQCARCAM120.9°119.9°
CAQCARH11119.6°120.1°
CANCAMCAR116.6°119.9°
CANCAMCAI119.6°120.1°
CAMCANH15119.0°120.1°
CARCAMCAI123.7°120.0°
CAMCARH11119.6°120.1°
CAMCAICAH124.2°126.3°
CAMCAICAE127.1°126.3°
CAHCAICAE108.6°107.4°
CAICAHCAG108.0°107.5°
CAICAHH6126.0°126.2°
CAICAECAF135.1°131.9°
CAICAENAD107.5°108.1°
CAHCAGCAJ126.0°125.8°
CAHCAGNAD108.3°108.4°
CAGCAHH6126.0°126.2°
CBCCAKCAJ101.9°109.4°
CAKCBCH1109.5°109.5°
CAKCBCH2109.5°109.4°
CAKCBCH3109.4°109.5°
CBCCAKH4111.3°109.4°
CBCCAKH5111.4°109.5°
CAKCAJCAG117.6°120.0°
CAKCAJOAL117.9°120.0°
CAJCAKH4111.3°109.5°
CAJCAKH5111.3°109.5°
CAFCAENAD117.5°120.0°
CAECAFCAA122.1°119.4°
CAECAFH10118.9°120.3°
CAENADCAG107.6°108.5°
CAENADCAC122.8°120.1°
CAJCAGNAD125.7°125.8°
CAGCAJOAL124.4°120.0°
CAGNADCAC129.6°131.4°
CAFCAACAB121.4°119.5°
CAFCAAH9119.3°120.3°
CAACAFH10119.0°120.3°
NADCACCAB118.7°120.8°
NADCACH7120.6°119.6°
CAACABCAC117.4°120.2°
CAACABH8121.3°119.9°
CABCAAH9119.3°120.2°
CABCACH7120.6°119.7°
CACCABH8121.3°119.8°
H1CBCH2109.5°109.5°
H1CBCH3109.5°109.5°
H2CBCH3109.5°109.4°
H4CAKH5109.4°109.5°
H12CAZH13109.4°109.4°
H12CAZH14109.5°109.5°
H13CAZH14109.5°109.4°
H16CBBH17109.5°109.5°
H16CBBH18109.4°109.5°
H17CBBH18109.5°109.4°
H19CASH20109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
NAWCAXNATH23180.0°179.6°
NAWCAXNATCAS179.2°179.8°
NAWCAXNATCAU0.4°0.4°
CAXNAWCAVCAU0.0°0.2°
CAXNAWCAVH22180.0°179.8°
NATCAXNAWCAV0.3°0.4°
CAXNATCASCAU178.5°179.7°
CAXNATCASCAP178.8°90.3°
CAXNATCAUCAV0.4°0.2°
CAXNATCASH1960.4°149.7°
CAXNATCASH2058.0°29.7°
CAXNATCAUH21179.6°179.8°
NAWCAVCAUNAT0.3°0.0°
NAWCAVCAUH22180.0°180.0°
NAWCAVCAUH21179.7°179.9°
CAVNAWCAXH23179.7°180.0°
NATCASCAPH19120.8°119.9°
NATCASCAPH20120.8°120.0°
CASNATCAUCAV179.1°180.0°
NATCASCAPCAO90.4°90.0°
NATCASCAPCAQ89.7°90.2°
NATCASH19H20117.6°120.0°
CASNATCAUH210.9°0.0°
CASNATCAXH230.8°0.2°
CAPCASNATCAU0.3°90.0°
CASCAPCAOOBA1.6°0.0°
CASCAPCAOCAQ180.0°179.8°
CASCAPCAOCAN179.3°180.0°
CASCAPCAQOAY0.3°0.0°
CASCAPCAQCAR179.3°180.0°
CAPCASH19H20117.6°120.0°
NATCAUCAVH21180.0°179.9°
CAUNATCASH19121.0°30.0°
CAUNATCASH20120.5°150.0°
NATCAUCAVH22179.7°180.0°
CAUNATCAXH23179.6°180.0°
CBBOBACAOCAP149.7°179.9°
CBBOBACAOCAN32.7°0.0°
OBACBBH16H17120.0°120.0°
OBACBBH16H18120.0°120.0°
OBACBBH17H18120.0°120.0°
OBACAOCAPCAN177.7°180.0°
OBACAOCAPCAQ178.4°179.8°
OBACAOCANCAM179.0°180.0°
OBACAOCANH151.0°0.0°
CAOOBACBBH16180.0°60.0°
CAOOBACBBH1760.0°60.0°
CAOOBACBBH1860.0°180.0°
CAOCAPCAQOAY179.6°179.8°
CAOCAPCAQCAR0.7°0.2°
CAPCAOCANCAM1.6°0.1°
CAPCAOCANH15178.5°180.0°
CAOCAPCASH19148.8°150.1°
CAOCAPCASH2030.4°30.0°
CAQCAPCAOCAN0.7°0.2°
CAPCAQOAYCAR178.9°179.9°
CAPCAQOAYCAZ130.6°180.0°
CAPCAQCARCAM1.3°0.0°
CAPCAQCARH11178.6°180.0°
CAQCAPCASH1931.1°29.7°
CAQCAPCASH20149.6°149.8°
CAOCANCAMH15180.0°180.0°
CAOCANCAMCAR0.9°0.3°
CAOCANCAMCAI179.0°180.0°
OAYCAQCARCAM179.8°180.0°
OAYCAQCARH110.2°0.0°
CAQOAYCAZH12180.0°60.0°
CAQOAYCAZH1360.0°60.0°
CAQOAYCAZH1460.0°180.0°
CAZOAYCAQCAR50.5°0.0°
OAYCAZH12H13120.0°120.0°
OAYCAZH12H14120.0°120.0°
OAYCAZH13H14120.0°120.0°
CAQCARCAMCAN0.5°0.2°
CAQCARCAMH11180.0°180.0°
CAQCARCAMCAI177.5°180.0°
CANCAMCARCAI178.1°179.7°
CANCAMCAICAH37.8°129.7°
CANCAMCAICAE138.0°50.0°
CANCAMCARH11179.5°179.8°
CARCAMCAICAH144.2°50.0°
CARCAMCAICAE40.0°130.2°
CARCAMCANH15179.1°179.8°
CAMCAICAHCAE176.4°179.8°
CAMCAICAHCAG177.7°180.0°
CAMCAICAECAF2.7°0.0°
CAMCAICAENAD177.4°179.8°
CAMCAICAHH62.3°0.1°
CAICAMCARH112.5°0.0°
CAICAMCANH151.0°0.0°
CAICAHCAGH6180.0°180.0°
CAHCAICAECAF179.1°179.8°
CAHCAICAENAD1.1°0.1°
CAICAHCAGCAJ179.3°179.9°
CAICAHCAGNAD0.9°0.3°
CAECAICAHCAG1.3°0.2°
CAICAECAFNAD179.8°179.8°
CAICAENADCAG0.5°0.1°
CAICAECAFCAA179.5°179.8°
CAICAENADCAC179.5°179.8°
CAECAICAHH6178.7°179.8°
CAICAECAFH100.5°0.2°
CAHCAGCAJCAK12.5°0.2°
CAHCAGNADCAE0.2°0.2°
CAHCAGCAJNAD178.1°179.8°
CAHCAGCAJOAL171.4°179.7°
CAHCAGNADCAC179.7°179.7°
CBCCAKCAJH4118.8°119.9°
CBCCAKCAJH5118.8°120.0°
CBCCAKCAJCAG91.6°180.0°
CBCCAKCAJOAL92.0°0.1°
CAKCBCH1H2120.0°120.0°
CAKCBCH1H3120.0°120.0°
CAKCBCH2H3119.9°119.9°
CBCCAKH4H5123.6°120.0°
CAKCAJCAGOAL176.1°179.9°
CAKCAJCAGNAD165.7°180.0°
CAJCAKCBCH1180.0°60.0°
CAJCAKCBCH260.0°60.1°
CAJCAKCBCH360.0°180.0°
CAJCAKH4H5123.5°120.1°
CAFCAENADCAG179.6°180.0°
CAECAFCAAH10180.0°180.0°
CAFCAENADCAC0.3°0.0°
CAECAFCAACAB0.6°0.0°
CAECAFCAAH9179.4°179.9°
CAENADCAGCAJ178.7°180.0°
CAENADCAGCAC179.9°179.9°
NADCAECAFCAA0.3°0.0°
CAENADCACCAB0.7°0.1°
CAENADCACH7179.3°180.0°
NADCAECAFH10179.7°180.0°
CAJCAGNADCAC1.3°0.1°
CAGCAJCAKH4149.6°60.1°
CAGCAJCAKH527.2°60.0°
CAJCAGCAHH60.7°0.0°
NADCAGCAJOAL10.5°0.1°
CAGNADCACCAB179.2°180.0°
NADCAGCAHH6179.1°179.8°
CAGNADCACH70.8°0.1°
CAFCAACABH9180.0°180.0°
CAFCAACABCAC0.9°0.1°
CAFCAACABH8179.1°180.0°
OALCAJCAKH426.8°120.0°
OALCAJCAKH5149.2°120.0°
NADCACCABCAA1.0°0.1°
NADCACCABH7180.0°179.9°
NADCACCABH8179.1°180.0°
CAACABCACH8180.0°179.9°
CAACABCACH7179.0°180.0°
CABCAACAFH10179.4°180.0°
CACCABCAAH9179.0°179.9°
H1CBCH2H3120.0°120.1°
H1CBCCAKH461.2°60.0°
H1CBCCAKH561.2°180.0°
H2CBCCAKH458.8°180.0°
H2CBCCAKH5178.7°60.0°
H3CBCCAKH4178.8°60.0°
H3CBCCAKH558.8°60.0°
H7CACCABH81.0°0.1°
H8CABCAAH90.9°0.0°
H9CAACAFH100.6°0.1°
H12CAZH13H14120.0°120.0°
H16CBBH17H18120.0°120.0°
H21CAUCAVH220.3°0.1°

251801

PDB entries from 2026-04-08

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