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SummaryGeometryRelated PDB entries

A1EEX

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
CLAUCAOsing1.74Å1.74Å
CAPCAOdoub1.38Å1.39ÅAromatic
CAPNAQsing1.32Å1.39ÅAromatic
CAOCAMsing1.39Å1.40ÅAromatic
CANCAKsing1.53Å1.53Å
OAJCAKsing1.43Å1.44Å
OAJCAAsing1.36Å1.37Å
NAQCARdoub1.32Å1.39ÅAromatic
CABCAAdoub1.39Å1.39ÅAromatic
CABCACsing1.36Å1.39ÅAromatic
CAMCAKsing1.51Å1.41Å
CAMCASdoub1.39Å1.39ÅAromatic
CAACAFsing1.38Å1.39ÅAromatic
CACCADdoub1.39Å1.33ÅAromatic
CARCASsing1.38Å1.39ÅAromatic
CASCLATsing1.74Å1.72Å
CAFCAEdoub1.40Å1.34ÅAromatic
CADCAEsing1.41Å1.33ÅAromatic
CADNAGsing1.37Å1.33ÅAromatic
CAECAIsing1.46Å1.33ÅAromatic
NAGNAHsing1.40Å1.22ÅAromatic
OAWCAVdoub1.22Å1.23Å
CAINAHdoub1.31Å1.33ÅAromatic
CAINALsing1.40Å1.33Å
FBHCBCsing1.35Å1.35Å
CAVNALsing1.35Å1.34Å
CAVCAXsing1.47Å1.40Å
CBCCAXdoub1.40Å1.39ÅAromatic
CBCCBBsing1.38Å1.39ÅAromatic
CAXCAYsing1.40Å1.39ÅAromatic
CBBCBAdoub1.38Å1.39ÅAromatic
CAYNBDsing1.39Å1.33Å
CAYCAZdoub1.39Å1.39ÅAromatic
NBDCBEsing1.35Å1.34Å
CBACAZsing1.38Å1.39ÅAromatic
CBECBFsing1.51Å1.53Å
CBEOBGdoub1.21Å1.23Å
CBFCBIsing1.53Å1.52Å
CARH1sing1.08Å1.08Å
CAPH2sing1.08Å1.08Å
CAKH3sing1.09Å1.10Å
CANH4sing1.09Å1.10Å
CANH5sing1.09Å1.10Å
CANH6sing1.09Å1.10Å
CAFH7sing1.08Å1.08Å
CABH8sing1.08Å1.08Å
CACH9sing1.08Å1.08Å
NAGH10sing0.97Å1.00Å
NALH11sing0.97Å1.00Å
CBBH12sing1.08Å1.08Å
CBAH13sing1.08Å1.08Å
CAZH14sing1.08Å1.08Å
NBDH15sing0.97Å1.00Å
CBFH16sing1.09Å1.10Å
CBFH17sing1.09Å1.10Å
CBIH18sing1.09Å1.10Å
CBIH19sing1.09Å1.10Å
CBIH20sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
CLAUCAOCAP116.9°120.4°
CLAUCAOCAM123.4°120.4°
CAOCAPNAQ121.3°120.8°
CAPCAOCAM119.8°119.1°
CAOCAPH2119.3°119.6°
CAPNAQCAR119.0°121.8°
NAQCAPH2119.4°119.7°
CAOCAMCAK124.4°120.8°
CAOCAMCAS118.6°118.4°
CANCAKOAJ108.8°109.5°
CANCAKCAM109.3°109.4°
CANCAKH3107.1°109.4°
CAKCANH4109.5°109.5°
CAKCANH5109.5°109.5°
CAKCANH6109.5°109.5°
CAKOAJCAA119.2°117.0°
OAJCAKCAM114.5°109.5°
OAJCAKH3108.2°109.5°
OAJCAACAB118.3°119.8°
OAJCAACAF123.4°119.9°
NAQCARCAS120.0°120.7°
NAQCARH1120.0°119.6°
CAACABCAC119.1°120.8°
CABCAACAF118.3°120.3°
CAACABH8120.5°119.6°
CABCACCAD120.0°120.0°
CACCABH8120.4°119.6°
CABCACH9120.0°120.0°
CAKCAMCAS117.0°120.8°
CAMCAKH3108.6°109.5°
CAMCASCAR121.4°119.2°
CAMCASCLAT119.9°120.4°
CAACAFCAE119.7°119.6°
CAACAFH7120.1°120.2°
CACCADCAE121.1°119.6°
CACCADNAG131.4°133.6°
CADCACH9120.0°120.0°
CARCASCLAT118.7°120.4°
CASCARH1120.0°119.6°
CAFCAECAD121.8°119.7°
CAFCAECAI133.0°134.0°
CAECAFH7120.1°120.3°
CAECADNAG107.5°106.7°
CADCAECAI105.2°106.3°
CADNAGNAH110.0°109.2°
CADNAGH10125.0°125.4°
CAECAINAH108.2°107.7°
CAECAINAL129.0°126.1°
NAGNAHCAI109.1°110.0°
NAHNAGH10125.0°125.4°
OAWCAVNAL124.1°120.0°
OAWCAVCAX121.2°120.0°
NAHCAINAL122.7°126.2°
CAINALCAV119.2°120.0°
CAINALH11120.4°120.0°
FBHCBCCAX120.0°120.0°
FBHCBCCBB119.6°120.0°
NALCAVCAX114.6°120.0°
CAVNALH11120.4°120.0°
CAVCAXCBC119.0°120.2°
CAVCAXCAY122.1°120.3°
CAXCBCCBB120.4°119.9°
CBCCAXCAY118.9°119.5°
CBCCBBCBA120.2°120.2°
CBCCBBH12119.9°119.9°
CAXCAYNBD117.3°120.1°
CAXCAYCAZ120.9°119.7°
CBBCBACAZ119.8°120.5°
CBACBBH12119.9°119.9°
CBBCBAH13120.1°119.7°
NBDCAYCAZ121.8°120.1°
CAYNBDCBE119.0°120.0°
CAYNBDH15120.5°120.0°
CAYCAZCBA119.7°120.1°
CAYCAZH14120.2°120.0°
NBDCBECBF114.1°120.0°
NBDCBEOBG125.0°120.0°
CBENBDH15120.5°120.0°
CAZCBAH13120.1°119.8°
CBACAZH14120.2°119.9°
CBFCBEOBG120.9°120.0°
CBECBFCBI109.1°109.5°
CBECBFH16109.6°109.4°
CBECBFH17109.6°109.4°
CBICBFH16109.5°109.5°
CBICBFH17109.5°109.5°
CBFCBIH18109.5°109.5°
CBFCBIH19109.5°109.5°
CBFCBIH20109.5°109.5°
H4CANH5109.5°109.5°
H4CANH6109.5°109.5°
H5CANH6109.5°109.4°
H16CBFH17109.5°109.5°
H18CBIH19109.5°109.5°
H18CBIH20109.5°109.5°
H19CBIH20109.4°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
CLAUCAOCAPCAM179.6°179.7°
CLAUCAOCAPNAQ179.8°180.0°
CLAUCAOCAMCAK0.6°0.3°
CLAUCAOCAMCAS179.7°179.8°
CLAUCAOCAPH20.1°0.3°
CAOCAPNAQH2180.0°179.8°
CAOCAPNAQCAR0.2°0.0°
CAPCAOCAMCAK179.8°180.0°
CAPCAOCAMCAS0.7°0.5°
NAQCAPCAOCAM0.5°0.2°
CAPNAQCARCAS0.1°0.0°
CAPNAQCARH1179.9°180.0°
CAOCAMCAKCAN87.5°105.0°
CAOCAMCAKOAJ34.8°135.0°
CAOCAMCAKCAS179.1°179.5°
CAOCAMCASCAR0.6°0.5°
CAOCAMCASCLAT179.6°179.8°
CAMCAOCAPH2179.5°180.0°
CAOCAMCAKH3155.9°14.9°
CANCAKOAJCAM122.6°120.0°
CANCAKOAJH3116.1°120.0°
CANCAKOAJCAA159.5°93.8°
CANCAKCAMH3116.6°119.9°
CANCAKCAMCAS91.6°75.5°
CAKCANH4H5120.0°120.0°
CAKCANH4H6120.0°120.0°
CAKCANH5H6120.0°120.0°
CAKOAJCAACAB175.6°174.2°
OAJCAKCAMH3121.1°120.1°
OAJCAKCAMCAS146.1°44.5°
CAKOAJCAACAF4.5°6.0°
OAJCAKCANH4180.0°180.0°
OAJCAKCANH560.0°59.9°
OAJCAKCANH660.0°60.0°
OAJCAACABCAF179.9°179.8°
OAJCAACABCAC179.9°180.0°
CAAOAJCAKCAM77.9°146.2°
OAJCAACAFCAE179.9°180.0°
CAAOAJCAKH343.4°26.2°
OAJCAACAFH70.2°0.0°
OAJCAACABH80.1°0.1°
NAQCARCASCAM0.3°0.3°
NAQCARCASH1180.0°180.0°
NAQCARCASCLAT179.9°180.0°
CARNAQCAPH2179.8°179.8°
CAACABCACH8180.0°179.9°
CAACABCACCAD0.2°0.0°
CABCAACAFCAE0.2°0.2°
CABCAACAFH7179.8°179.8°
CAACABCACH9179.8°179.9°
CACCABCAACAF0.2°0.2°
CABCACCADH9180.0°180.0°
CABCACCADCAE0.3°0.2°
CABCACCADNAG179.7°179.9°
CAKCAMCASCAR179.7°180.0°
CAKCAMCASCLAT0.4°0.3°
CAMCAKCANH454.3°60.0°
CAMCAKCANH565.7°60.0°
CAMCAKCANH6174.3°180.0°
CAMCASCARCLAT179.8°179.7°
CAMCASCARH1179.7°179.7°
CASCAMCAKH325.0°164.6°
CAACAFCAEH7180.0°180.0°
CAACAFCAECAD0.2°0.0°
CAACAFCAECAI179.4°180.0°
CAFCAACABH8179.8°179.7°
CACCADCAECAF0.3°0.2°
CACCADCAENAG179.6°179.9°
CACCADCAECAI179.5°179.8°
CACCADNAGNAH179.7°180.0°
CADCACCABH8179.8°180.0°
CACCADNAGH100.3°0.1°
CLATCASCARH10.1°0.0°
CAFCAECADCAI179.7°180.0°
CAFCAECADNAG179.8°179.9°
CAFCAECAINAH179.9°179.6°
CAFCAECAINAL1.4°0.0°
CAECADNAGNAH0.3°0.2°
CADCAECAINAH0.4°0.4°
CADCAECAINAL178.9°180.0°
CADCAECAFH7179.7°180.0°
CAECADCACH9179.7°179.7°
CAECADNAGH10179.7°179.7°
NAGCADCAECAI0.1°0.1°
CADNAGNAHH10180.0°179.9°
CADNAGNAHCAI0.5°0.4°
NAGCADCACH90.3°0.1°
CAECAINAHNAG0.6°0.5°
CAECAINAHNAL178.6°179.7°
CAECAINALCAV88.7°180.0°
CAICAECAFH70.6°0.0°
CAECAINALH1191.3°0.0°
NAGNAHCAINAL179.2°179.8°
OAWCAVNALCAI0.4°0.0°
OAWCAVNALCAX177.6°179.9°
OAWCAVCAXCBC66.4°89.8°
OAWCAVCAXCAY114.5°90.0°
OAWCAVNALH11179.6°180.0°
NAHCAINALCAV93.0°0.4°
CAINAHNAGH10179.5°179.5°
NAHCAINALH1187.0°179.6°
CAINALCAVH11180.0°180.0°
CAINALCAVCAX177.9°179.9°
FBHCBCCAXCAV0.4°0.0°
FBHCBCCAXCBB180.0°180.0°
FBHCBCCAXCAY179.5°179.8°
FBHCBCCBBCBA180.0°180.0°
FBHCBCCBBH120.0°0.1°
NALCAVCAXCBC111.2°90.3°
NALCAVCAXCAY67.8°89.9°
CAVCAXCBCCAY179.1°179.8°
CAVCAXCBCCBB179.6°180.0°
CAVCAXCAYNBD1.5°0.0°
CAVCAXCAYCAZ179.8°179.8°
CAXCAVNALH112.1°0.0°
CAXCBCCBBCBA0.0°0.1°
CBCCAXCAYNBD179.4°179.7°
CBCCAXCAYCAZ1.1°0.5°
CAXCBCCBBH12180.0°180.0°
CBBCBCCAXCAY0.5°0.2°
CBCCBBCBAH12180.0°179.9°
CBCCBBCBACAZ0.1°0.0°
CBCCBBCBAH13179.9°180.0°
CAXCAYNBDCAZ178.3°179.8°
CAXCAYNBDCBE120.1°145.5°
CAXCAYCAZCBA1.2°0.5°
CAXCAYCAZH14178.8°179.8°
CAXCAYNBDH1559.9°34.5°
CBBCBACAZCAY0.6°0.2°
CBBCBACAZH13180.0°179.9°
CBBCBACAZH14179.4°180.0°
CAYNBDCBEH15180.0°180.0°
NBDCAYCAZCBA179.4°179.7°
CAYNBDCBECBF179.2°175.6°
CAYNBDCBEOBG1.8°4.4°
NBDCAYCAZH140.6°0.0°
CAZCAYNBDCBE61.6°34.7°
CAYCAZCBAH14180.0°179.7°
CAYCAZCBAH13179.4°179.7°
CAZCAYNBDH15118.4°145.3°
NBDCBECBFOBG179.1°180.0°
NBDCBECBFCBI150.1°180.0°
NBDCBECBFH1630.2°60.0°
NBDCBECBFH1789.9°60.0°
CAZCBACBBH12180.0°179.9°
CBECBFCBIH16120.0°120.0°
CBECBFCBIH17119.9°120.0°
CBFCBENBDH150.9°4.4°
CBECBFH16H17120.2°119.9°
CBECBFCBIH18180.0°180.0°
CBECBFCBIH1960.0°60.0°
CBECBFCBIH2060.0°60.0°
OBGCBECBFCBI29.0°0.0°
OBGCBENBDH15178.2°175.6°
OBGCBECBFH16148.9°120.0°
OBGCBECBFH1790.9°120.0°
CBICBFH16H17120.1°120.1°
CBFCBIH18H19120.0°120.0°
CBFCBIH18H20120.0°120.0°
CBFCBIH19H20120.0°120.0°
H3CAKCANH463.2°60.0°
H3CAKCANH5176.8°180.0°
H3CAKCANH656.8°60.0°
H4CANH5H6120.0°120.0°
H8CABCACH90.2°0.0°
H12CBBCBAH130.0°0.1°
H13CBACAZH140.6°0.0°
H16CBFCBIH1860.1°60.0°
H16CBFCBIH19179.9°179.9°
H16CBFCBIH2060.0°60.0°
H17CBFCBIH1860.0°60.0°
H17CBFCBIH1960.0°60.0°
H17CBFCBIH20179.9°180.0°
H18CBIH19H20120.0°120.0°

248942

PDB entries from 2026-02-11

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