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Summary Geometry Related PDB entries

A1E1M

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O10	C09	doub	1.22Å	1.26Å
C09	O11	sing	1.35Å	1.26Å
C09	C08	sing	1.47Å	1.52Å
BR05	C04	sing	1.89Å	1.95Å
N07	C08	sing	1.38Å	1.32Å	Aromatic
N07	C06	sing	1.37Å	1.34Å	Aromatic
C08	C12	doub	1.36Å	1.39Å	Aromatic
C06	C04	doub	1.39Å	1.40Å	Aromatic
C06	C13	sing	1.41Å	1.38Å	Aromatic
C04	C03	sing	1.38Å	1.39Å	Aromatic
C12	C13	sing	1.42Å	1.41Å	Aromatic
C13	C14	doub	1.40Å	1.40Å	Aromatic
C03	C02	doub	1.39Å	1.39Å	Aromatic
C14	C02	sing	1.36Å	1.39Å	Aromatic
C02	CL01	sing	1.74Å	1.79Å
C12	H121	sing	1.08Å	1.08Å
C14	H141	sing	1.08Å	1.08Å
C03	H031	sing	1.08Å	1.08Å
N07	H071	sing	0.97Å	1.00Å
O11	H1	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O10	C09	O11	121.8°	119.9°
O10	C09	C08	118.0°	120.0°
O11	C09	C08	120.2°	120.0°
C09	O11	H1	109.5°	117.0°
C09	C08	N07	124.7°	125.4°
C09	C08	C12	126.1°	125.4°
BR05	C04	C06	119.8°	120.1°
BR05	C04	C03	119.7°	120.1°
C08	N07	C06	109.9°	108.8°
N07	C08	C12	109.2°	109.1°
C08	N07	H071	125.0°	125.6°
N07	C06	C04	131.8°	133.2°
N07	C06	C13	108.5°	107.4°
C06	N07	H071	125.0°	125.6°
C08	C12	C13	105.7°	107.7°
C08	C12	H121	127.1°	126.1°
C04	C06	C13	119.7°	119.4°
C06	C04	C03	120.4°	119.8°
C06	C13	C12	106.7°	107.0°
C06	C13	C14	119.7°	119.7°
C04	C03	C02	119.8°	120.7°
C04	C03	H031	120.1°	119.6°
C12	C13	C14	133.7°	133.4°
C13	C12	H121	127.2°	126.2°
C13	C14	C02	120.7°	119.9°
C13	C14	H141	119.6°	120.1°
C03	C02	C14	119.7°	120.6°
C03	C02	CL01	120.2°	119.7°
C02	C03	H031	120.1°	119.7°
C14	C02	CL01	120.1°	119.7°
C02	C14	H141	119.6°	120.1°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O10	C09	O11	C08	178.9°	179.9°
O10	C09	C08	N07	11.5°	179.5°
O10	C09	C08	C12	167.9°	0.0°
O10	C09	O11	H1	0.0°	0.1°
O11	C09	C08	N07	169.6°	0.5°
O11	C09	C08	C12	11.1°	180.0°
C09	C08	N07	C12	179.5°	179.6°
C09	C08	N07	C06	179.3°	179.9°
C09	C08	C12	C13	179.3°	180.0°
C09	C08	C12	H121	0.7°	0.3°
C09	C08	N07	H071	0.7°	0.5°
C08	C09	O11	H1	178.9°	180.0°
BR05	C04	C06	N07	0.3°	0.0°
BR05	C04	C06	C03	179.6°	180.0°
BR05	C04	C06	C13	179.7°	180.0°
BR05	C04	C03	C02	179.7°	180.0°
BR05	C04	C03	H031	0.3°	0.0°
C08	N07	C06	H071	180.0°	179.6°
C08	N07	C06	C04	180.0°	179.8°
C08	N07	C06	C13	0.0°	0.2°
N07	C08	C12	C13	0.2°	0.4°
N07	C08	C12	H121	179.8°	179.8°
C06	N07	C08	C12	0.1°	0.4°
N07	C06	C04	C13	179.9°	180.0°
N07	C06	C04	C03	179.9°	180.0°
N07	C06	C13	C12	0.1°	0.0°
N07	C06	C13	C14	180.0°	180.0°
C08	C12	C13	C06	0.2°	0.3°
C08	C12	C13	H121	180.0°	179.8°
C08	C12	C13	C14	179.9°	179.8°
C12	C08	N07	H071	179.9°	179.9°
C04	C06	C13	C12	179.9°	180.0°
C04	C06	C13	C14	0.1°	0.0°
C06	C04	C03	C02	0.1°	0.0°
C06	C04	C03	H031	179.9°	180.0°
C04	C06	N07	H071	0.0°	0.2°
C13	C06	C04	C03	0.1°	0.0°
C06	C13	C12	C14	180.0°	179.9°
C06	C13	C14	C02	0.3°	0.1°
C06	C13	C12	H121	179.8°	180.0°
C06	C13	C14	H141	179.7°	179.9°
C13	C06	N07	H071	180.0°	179.8°
C04	C03	C02	H031	180.0°	180.0°
C04	C03	C02	C14	0.1°	0.0°
C04	C03	C02	CL01	179.7°	180.0°
C12	C13	C14	C02	179.7°	180.0°
C12	C13	C14	H141	0.3°	0.1°
C13	C14	C02	C03	0.3°	0.1°
C13	C14	C02	H141	180.0°	180.0°
C13	C14	C02	CL01	179.6°	180.0°
C14	C13	C12	H121	0.1°	0.1°
C03	C02	C14	CL01	179.8°	179.9°
C03	C02	C14	H141	179.7°	179.9°
C14	C02	C03	H031	179.9°	180.0°
CL01	C02	C14	H141	0.4°	0.0°
CL01	C02	C03	H031	0.3°	0.0°

249697

PDB entries from 2026-02-25

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