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A1DPB

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.51Å1.49Å
C2N1doub1.29Å1.31ÅAromatic
N1C3sing1.32Å1.33ÅAromatic
C3C4sing1.51Å1.50Å
C4N2sing1.47Å1.48Å
N2C5sing1.36Å1.37Å
C5C6doub1.35Å1.35Å
C6C7sing1.40Å1.41Å
C7C8sing1.51Å1.50Å
C7C9doub1.36Å1.37Å
C9C10sing1.40Å1.43Å
C10O1doub1.22Å1.24Å
C3C11doub1.34Å1.35ÅAromatic
C11S1sing1.76Å1.72ÅAromatic
C2S1sing1.71Å1.73ÅAromatic
N2C10sing1.35Å1.41Å
C1H1sing1.09Å1.10Å
C1H2sing1.09Å1.10Å
C1H3sing1.09Å1.10Å
C4H4sing1.09Å1.10Å
C4H5sing1.09Å1.10Å
C5H6sing1.08Å1.08Å
C6H7sing1.08Å1.08Å
C8H10sing1.09Å1.10Å
C8H8sing1.09Å1.10Å
C8H9sing1.09Å1.10Å
C9H11sing1.08Å1.08Å
C11H12sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1C2N1124.7°125.0°
C1C2S1121.8°124.9°
C2C1H1109.5°109.4°
C2C1H2109.4°109.5°
C2C1H3109.4°109.4°
C2N1C3113.0°117.1°
N1C2S1113.5°110.2°
N1C3C4120.7°122.7°
N1C3C11113.6°114.5°
C3C4N2112.8°109.5°
C4C3C11125.7°122.8°
C3C4H4108.6°109.4°
C3C4H5108.7°109.5°
C4N2C5119.3°119.6°
C4N2C10119.3°119.6°
N2C4H4108.7°109.5°
N2C4H5108.7°109.5°
N2C5C6121.3°120.7°
C5N2C10121.5°120.8°
N2C5H6119.3°119.7°
C5C6C7120.2°119.9°
C6C5H6119.3°119.6°
C5C6H7119.9°120.1°
C6C7C8121.5°120.3°
C6C7C9119.0°119.3°
C7C6H7119.9°120.0°
C8C7C9119.5°120.4°
C7C8H10109.5°109.5°
C7C8H8109.5°109.5°
C7C8H9109.5°109.5°
C7C9C10121.8°119.3°
C7C9H11119.1°120.4°
C9C10O1123.7°120.0°
C9C10N2116.2°120.0°
C10C9H11119.1°120.3°
O1C10N2120.1°120.0°
C3C11S1111.8°107.9°
C3C11H12124.1°126.0°
C11S1C287.4°90.3°
S1C11H12124.1°126.1°
H1C1H2109.5°109.5°
H1C1H3109.5°109.5°
H2C1H3109.5°109.5°
H4C4H5109.4°109.4°
H10C8H8109.5°109.4°
H10C8H9109.5°109.5°
H8C8H9109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1C2N1S1179.9°179.8°
C1C2N1C3175.7°179.9°
C1C2S1C11173.2°180.0°
C2C1H1H2120.0°120.1°
C2C1H1H3120.0°119.9°
C2C1H2H3120.0°120.0°
C2N1C3C4179.0°180.0°
C2N1C3C111.7°0.0°
N1C2S1C116.8°0.3°
N1C2C1H10.0°90.0°
N1C2C1H2120.0°150.0°
N1C2C1H3120.0°30.0°
N1C3C4C11179.2°180.0°
N1C3C4N274.6°85.0°
N1C3C11S17.0°0.2°
C3N1C2S14.3°0.2°
N1C3C4H445.9°35.0°
N1C3C4H5164.9°155.0°
N1C3C11H12173.0°180.0°
C3C4N2H4120.5°120.0°
C3C4N2H5120.5°120.0°
C3C4N2C5104.7°90.0°
C4C3C11S1173.8°179.8°
C3C4N2C1075.8°90.3°
C3C4H4H5118.5°120.0°
C4C3C11H126.2°0.0°
C4N2C5C10179.5°179.7°
C4N2C5C6179.5°180.0°
C4N2C10C9179.7°179.7°
C4N2C10O10.4°0.0°
N2C4C3C11106.2°95.0°
N2C4H4H5118.5°120.0°
C4N2C5H60.5°0.0°
N2C5C6H6180.0°180.0°
N2C5C6C70.3°0.0°
C5N2C10C90.2°0.6°
C5N2C10O1180.0°179.7°
C5N2C4H415.8°30.0°
C5N2C4H5134.8°150.0°
N2C5C6H7179.7°179.9°
C5C6C7H7180.0°179.9°
C5C6C7C8179.4°180.0°
C5C6C7C90.8°0.0°
C6C5N2C100.0°0.3°
C6C7C8C9179.7°180.0°
C6C7C9C101.1°0.3°
C7C6C5H6179.7°180.0°
C6C7C8H10180.0°90.0°
C6C7C8H860.0°150.0°
C6C7C8H960.0°30.0°
C6C7C9H11178.9°180.0°
C8C7C9C10179.2°179.7°
C8C7C6H70.5°0.1°
C7C8H10H8120.0°120.0°
C7C8H10H9120.0°120.0°
C7C8H8H9120.0°120.0°
C8C7C9H110.8°0.0°
C7C9C10H11180.0°179.8°
C7C9C10O1179.4°179.7°
C7C9C10N20.8°0.6°
C9C7C6H7179.2°179.9°
C9C7C8H100.3°90.0°
C9C7C8H8119.7°30.0°
C9C7C8H9120.3°150.0°
C9C10O1N2179.8°179.7°
O1C10C9H110.6°0.0°
C3C11S1H12180.0°179.8°
C3C11S1C27.6°0.3°
C11C3C4H4133.3°145.0°
C11C3C4H514.3°25.0°
S1C2C1H1179.9°90.3°
S1C2C1H259.9°29.7°
S1C2C1H360.1°149.7°
C2S1C11H12172.4°179.9°
C10N2C4H4163.7°149.7°
C10N2C4H544.7°29.7°
C10N2C5H6180.0°179.7°
N2C10C9H11179.2°179.7°
H1C1H2H3120.0°120.0°
H6C5C6H70.2°0.1°
H10C8H8H9120.0°120.0°

258009

PDB entries from 2026-08-12

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