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A1DOQ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.51Å1.47Å
C2C3doub1.35Å1.34ÅAromatic
C3C4sing1.42Å1.40ÅAromatic
C4N1doub1.31Å1.31ÅAromatic
N1O1sing1.21Å1.40ÅAromatic
C4C5sing1.48Å1.48Å
C5O2doub1.21Å1.24Å
C5N2sing1.35Å1.34Å
N2C6sing1.47Å1.46Å
C6C7sing1.51Å1.53Å
C7C8doub1.33Å1.42ÅAromatic
C8C9sing1.38Å1.41ÅAromatic
C9C10doub1.33Å1.36ÅAromatic
C10S1sing1.76Å1.71ÅAromatic
C2O1sing1.34Å1.34ÅAromatic
C7S1sing1.76Å1.74ÅAromatic
C1H1sing1.09Å1.10Å
C1H2sing1.09Å1.10Å
C1H3sing1.09Å1.10Å
C3H4sing1.08Å1.08Å
N2H5sing0.97Å1.00Å
C6H6sing1.09Å1.10Å
C6H7sing1.09Å1.10Å
C8H8sing1.08Å1.08Å
C9H9sing1.08Å1.08Å
C10H10sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1C2C3135.0°126.6°
C1C2O1115.8°126.6°
C2C1H1109.5°109.5°
C2C1H2109.4°109.5°
C2C1H3109.5°109.4°
C2C3C4105.9°103.9°
C3C2O1109.1°106.7°
C2C3H4127.1°128.1°
C3C4N1110.6°106.1°
C3C4C5128.3°127.0°
C4C3H4127.1°128.0°
C4N1O1106.0°111.5°
N1C4C5121.2°126.9°
N1O1C2108.4°111.8°
C4C5O2120.0°119.9°
C4C5N2117.4°120.0°
O2C5N2122.6°120.0°
C5N2C6121.4°119.9°
C5N2H5119.3°120.0°
N2C6C7114.6°109.4°
C6N2H5119.3°120.0°
N2C6H6108.2°109.5°
N2C6H7108.2°109.5°
C6C7C8127.1°125.2°
C6C7S1121.7°125.2°
C7C6H6108.2°109.5°
C7C6H7108.2°109.4°
C7C8C9111.0°115.0°
C8C7S1111.1°109.6°
C7C8H8124.5°122.6°
C8C9C10113.7°114.9°
C9C8H8124.5°122.5°
C8C9H9123.2°122.6°
C9C10S1113.0°109.6°
C10C9H9123.2°122.5°
C9C10H10123.5°125.2°
C10S1C791.1°91.0°
S1C10H10123.5°125.2°
H1C1H2109.5°109.6°
H1C1H3109.4°109.5°
H2C1H3109.5°109.4°
H6C6H7109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1C2C3O1179.3°179.8°
C1C2C3C4179.9°180.0°
C1C2O1N1179.8°179.8°
C2C1H1H2120.0°120.0°
C2C1H1H3120.0°119.9°
C2C1H2H3120.0°119.9°
C1C2C3H40.1°0.0°
C2C3C4H4180.0°180.0°
C2C3C4N10.6°0.0°
C3C2O1N10.7°0.5°
C2C3C4C5179.2°180.0°
C3C2C1H1179.2°89.9°
C3C2C1H260.7°150.0°
C3C2C1H359.3°30.1°
C3C4N1C5179.9°180.0°
C3C4N1O10.2°0.3°
C3C4C5O2162.6°0.0°
C3C4C5N218.7°180.0°
C4C3C2O10.8°0.3°
N1C4C5O217.3°180.0°
N1C4C5N2161.5°0.0°
C4N1O1C20.3°0.5°
N1C4C3H4179.4°180.0°
O1N1C4C5179.7°179.7°
C4C5O2N2178.7°180.0°
C4C5N2C6173.8°180.0°
C5C4C3H40.7°0.0°
C4C5N2H56.2°0.0°
O2C5N2C64.9°0.0°
O2C5N2H5175.1°180.0°
C5N2C6H5180.0°180.0°
C5N2C6C786.8°180.0°
C5N2C6H6152.4°60.0°
C5N2C6H733.9°60.1°
N2C6C7H6120.7°120.0°
N2C6C7H7120.8°120.0°
N2C6C7C8100.5°90.0°
N2C6C7S180.8°90.3°
N2C6H6H7117.7°120.1°
C6C7C8S1178.7°179.7°
C6C7C8C9177.5°179.9°
C6C7S1C10176.2°180.0°
C7C6N2H593.1°0.0°
C7C6H6H7117.7°119.9°
C6C7C8H82.5°0.0°
C7C8C9H8180.0°179.9°
C7C8C9C101.3°0.0°
C8C7S1C102.6°0.3°
C8C7C6H620.2°30.0°
C8C7C6H7138.7°150.0°
C7C8C9H9178.7°180.0°
C8C9C10H9180.0°179.9°
C8C9C10S13.3°0.3°
C9C8C7S11.3°0.2°
C8C9C10H10176.7°179.9°
C9C10S1H10180.0°179.8°
C9C10S1C73.4°0.3°
C10C9C8H8178.7°180.0°
S1C10C9H9176.7°179.8°
O1C2C1H10.0°90.3°
O1C2C1H2120.0°29.8°
O1C2C1H3120.0°149.7°
O1C2C3H4179.2°179.8°
S1C7C6H6158.4°149.6°
S1C7C6H739.9°29.6°
S1C7C8H8178.7°179.7°
C7S1C10H10176.6°179.9°
H1C1H2H3120.0°120.1°
H5N2C6H627.6°120.0°
H5N2C6H7146.1°119.9°
H8C8C9H91.3°0.1°
H9C9C10H103.3°0.0°

258009

PDB entries from 2026-08-12

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