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A1DON

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O1C1doub1.22Å1.24Å
C1N1sing1.33Å1.37Å
N1C2doub1.32Å1.34Å
C2N2sing1.37Å1.36Å
N2C3sing1.47Å1.46Å
C3C4sing1.51Å1.51Å
C4C5doub1.33Å1.40ÅAromatic
C5C6sing1.38Å1.43ÅAromatic
C6C7doub1.33Å1.35ÅAromatic
C7S1sing1.76Å1.70ÅAromatic
C2C8sing1.47Å1.48Å
C8C9doub1.39Å1.41ÅAromatic
C9C10sing1.38Å1.36ÅAromatic
C10C11doub1.39Å1.39ÅAromatic
C11C12sing1.38Å1.37ÅAromatic
C12C13doub1.39Å1.40ÅAromatic
C13N3sing1.38Å1.38Å
C1N3sing1.35Å1.38Å
C4S1sing1.76Å1.73ÅAromatic
C8C13sing1.41Å1.41ÅAromatic
N2H1sing0.97Å1.00Å
C3H2sing1.09Å1.10Å
C3H3sing1.09Å1.10Å
C5H4sing1.08Å1.08Å
C6H5sing1.08Å1.08Å
C7H6sing1.08Å1.08Å
C9H7sing1.08Å1.08Å
C10H8sing1.08Å1.08Å
C11H9sing1.08Å1.08Å
C12H10sing1.08Å1.08Å
N3H11sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1C1N1120.2°118.6°
O1C1N3118.0°118.5°
C1N1C2119.9°121.8°
N1C1N3121.9°122.9°
N1C2N2118.5°120.8°
N1C2C8120.4°118.4°
C2N2C3123.9°120.0°
N2C2C8121.2°120.8°
C2N2H1118.0°120.0°
N2C3C4112.7°109.5°
C3N2H1118.1°120.0°
N2C3H2108.7°109.5°
N2C3H3108.6°109.4°
C3C4C5127.0°125.2°
C3C4S1122.2°125.2°
C4C3H2108.6°109.5°
C4C3H3108.6°109.4°
C4C5C6110.3°114.9°
C5C4S1110.8°109.6°
C4C5H4124.9°122.6°
C5C6C7114.4°114.9°
C6C5H4124.8°122.6°
C5C6H5122.8°122.5°
C6C7S1111.8°109.6°
C7C6H5122.8°122.5°
C6C7H6124.1°125.2°
C7S1C492.5°91.0°
S1C7H6124.1°125.2°
C2C8C9123.9°121.9°
C2C8C13118.0°118.2°
C8C9C10120.7°119.5°
C9C8C13118.1°120.0°
C8C9H7119.7°120.3°
C9C10C11120.5°120.5°
C10C9H7119.6°120.2°
C9C10H8119.7°119.8°
C10C11C12120.6°120.7°
C11C10H8119.7°119.8°
C10C11H9119.7°119.6°
C11C12C13119.6°119.7°
C12C11H9119.7°119.6°
C11C12H10120.2°120.1°
C12C13N3120.8°121.8°
C12C13C8120.5°119.7°
C13C12H10120.2°120.2°
C13N3C1121.1°120.2°
N3C13C8118.7°118.5°
C13N3H11119.4°119.9°
C1N3H11119.4°119.9°
H2C3H3109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1C1N1N3179.5°179.7°
O1C1N1C2179.9°179.9°
O1C1N3C13179.8°179.8°
O1C1N3H110.2°0.0°
C1N1C2N2179.9°180.0°
C1N1C2C80.4°0.0°
N1C1N3C130.6°0.5°
N1C1N3H11179.4°179.7°
N1C2N2C8179.7°180.0°
N1C2N2C33.5°0.0°
N1C2C8C9179.9°180.0°
C2N1C1N30.6°0.2°
N1C2C8C130.2°0.0°
N1C2N2H1176.5°180.0°
C2N2C3H1180.0°180.0°
C2N2C3C4103.5°180.0°
N2C2C8C90.4°0.0°
N2C2C8C13180.0°180.0°
C2N2C3H2136.0°60.0°
C2N2C3H317.0°60.0°
N2C3C4H2120.5°120.1°
N2C3C4H3120.5°119.9°
N2C3C4C589.2°90.1°
C3N2C2C8176.2°180.0°
N2C3C4S191.2°90.3°
N2C3H2H3118.5°120.0°
C3C4C5S1179.6°179.7°
C3C4C5C6177.2°180.0°
C3C4S1C7178.7°180.0°
C4C3N2H176.5°0.1°
C4C3H2H3118.5°120.0°
C3C4C5H42.8°0.1°
C4C5C6H4180.0°179.9°
C4C5C6C73.2°0.0°
C5C4S1C71.0°0.3°
C5C4C3H2150.3°30.0°
C5C4C3H331.2°150.0°
C4C5C6H5176.8°179.9°
C5C6C7H5180.0°179.9°
C5C6C7S12.5°0.2°
C6C5C4S12.5°0.3°
C5C6C7H6177.5°179.9°
C6C7S1H6180.0°179.9°
C6C7S1C40.9°0.3°
C7C6C5H4176.8°180.0°
S1C7C6H5177.5°179.8°
C2C8C9C13179.6°180.0°
C2C8C9C10178.9°180.0°
C2C8C13C12179.8°180.0°
C2C8C13N30.3°0.3°
C8C2N2H13.8°0.0°
C2C8C9H71.1°0.0°
C8C9C10H7180.0°180.0°
C8C9C10C111.4°0.0°
C9C8C13C120.2°0.0°
C9C8C13N3179.9°179.7°
C8C9C10H8178.7°180.0°
C9C10C11H8180.0°180.0°
C9C10C11C121.0°0.1°
C10C9C8C130.7°0.0°
C9C10C11H9179.0°180.0°
C10C11C12H9180.0°179.9°
C10C11C12C130.1°0.1°
C11C10C9H7178.6°180.0°
C10C11C12H10179.9°179.9°
C11C12C13H10180.0°180.0°
C11C12C13N3179.6°179.7°
C11C12C13C80.5°0.1°
C12C11C10H8179.0°179.9°
C12C13N3C8179.9°179.7°
C12C13N3C1179.7°179.8°
C13C12C11H9179.9°180.0°
C12C13N3H110.3°0.0°
C13N3C1H11180.0°179.8°
N3C13C12H100.4°0.3°
C1N3C13C80.5°0.5°
S1C4C3H229.3°149.7°
S1C4C3H3148.4°29.7°
S1C4C5H4177.5°179.8°
C4S1C7H6179.1°179.8°
C13C8C9H7179.3°180.0°
C8C13C12H10179.5°180.0°
C8C13N3H11179.5°179.7°
H1N2C3H244.0°120.0°
H1N2C3H3163.1°120.0°
H4C5C6H53.3°0.0°
H5C6C7H62.5°0.0°
H7C9C10H81.3°0.0°
H8C10C11H91.0°0.0°
H9C11C12H100.1°0.0°

258009

PDB entries from 2026-08-12

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