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A1DOM

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1N1sing1.46Å1.45Å
N1C2sing1.38Å1.35Å
C2N2doub1.30Å1.32ÅAromatic
N2C3sing1.31Å1.37ÅAromatic
C3C4doub1.37Å1.37ÅAromatic
C4C5sing1.42Å1.50Å
C5O1doub1.22Å1.20Å
C5O2sing1.35Å1.33Å
O2C6sing1.43Å1.45Å
C4S1sing1.76Å1.75ÅAromatic
C2S1sing1.71Å1.75ÅAromatic
C1H1sing1.09Å1.10Å
C1H2sing1.09Å1.10Å
C1H3sing1.09Å1.10Å
N1H4sing0.97Å1.00Å
C3H5sing1.08Å1.08Å
C6H6sing1.09Å1.10Å
C6H7sing1.09Å1.10Å
C6H8sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1N1C2123.8°120.0°
N1C1H1109.5°109.5°
N1C1H2109.4°109.5°
N1C1H3109.4°109.5°
C1N1H4105.8°120.0°
N1C2N2123.7°124.8°
N1C2S1122.6°124.7°
C2N1H4105.8°120.1°
C2N2C3108.7°117.3°
N2C2S1113.6°110.5°
N2C3C4116.7°114.0°
N2C3H5121.6°123.0°
C3C4C5128.0°126.1°
C3C4S1105.3°107.7°
C4C3H5121.6°123.0°
C4C5O1122.4°120.0°
C4C5O2113.5°120.0°
C5C4S1126.7°126.2°
O1C5O2124.0°120.0°
C5O2C6115.9°117.0°
O2C6H6109.5°109.4°
O2C6H7109.5°109.5°
O2C6H8109.5°109.5°
C4S1C287.8°90.4°
H1C1H2109.5°109.4°
H1C1H3109.5°109.5°
H2C1H3109.5°109.5°
H6C6H7109.5°109.4°
H6C6H8109.5°109.5°
H7C6H8109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1N1C2H4122.0°180.0°
C1N1C2N2144.7°0.1°
C1N1C2S138.5°179.7°
N1C1H1H2120.0°120.0°
N1C1H1H3120.0°120.0°
N1C1H2H3120.0°120.0°
N1C2N2S1177.1°179.7°
N1C2N2C3173.7°180.0°
N1C2S1C4162.2°179.9°
C2N1C1H1180.0°179.9°
C2N1C1H260.0°60.0°
C2N1C1H360.0°60.0°
C2N2C3C412.1°0.1°
N2C2S1C420.7°0.4°
N2C2N1H493.4°179.9°
C2N2C3H5167.9°179.9°
N2C3C4H5180.0°180.0°
N2C3C4C5150.8°180.0°
N2C3C4S126.7°0.2°
C3N2C2S19.2°0.3°
C3C4C5S1177.1°179.7°
C3C4C5O114.5°0.1°
C3C4C5O2164.7°180.0°
C3C4S1C224.8°0.3°
C4C5O1O2179.2°179.9°
C4C5O2C6174.6°180.0°
C5C4S1C2152.8°179.9°
C5C4C3H529.2°0.1°
O1C5O2C64.7°0.0°
O1C5C4S1162.5°179.6°
O2C5C4S118.2°0.3°
C5O2C6H6180.0°180.0°
C5O2C6H760.0°60.0°
C5O2C6H860.0°60.0°
O2C6H6H7120.0°120.0°
O2C6H6H8120.0°120.0°
O2C6H7H8120.0°120.0°
S1C4C3H5153.3°179.8°
S1C2N1H483.5°0.3°
H1C1H2H3120.0°120.0°
H1C1N1H458.0°0.0°
H2C1N1H462.0°120.0°
H3C1N1H4178.0°120.0°
H6C6H7H8120.0°120.0°

258009

PDB entries from 2026-08-12

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