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A1DOB

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O1C1doub1.21Å1.24Å
C1O2sing1.34Å1.24Å
C1C2sing1.51Å1.53Å
C2N1sing1.47Å1.45Å
N1C3sing1.34Å1.38Å
C3O3doub1.22Å1.21Å
C3S1sing1.77Å1.77Å
S1C4sing1.77Å1.75Å
C4C5doub1.38Å1.39ÅAromatic
C5C6sing1.38Å1.37ÅAromatic
C6C7doub1.38Å1.39ÅAromatic
C7C8sing1.38Å1.38ÅAromatic
C8C9doub1.40Å1.37ÅAromatic
N1C9sing1.38Å1.39Å
C4C9sing1.40Å1.40ÅAromatic
O2H7sing0.97Å0.95Å
C2H1sing1.09Å1.10Å
C2H2sing1.09Å1.10Å
C5H3sing1.08Å1.08Å
C6H4sing1.08Å1.08Å
C7H5sing1.08Å1.08Å
C8H6sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1C1O2126.3°120.0°
O1C1C2116.5°120.0°
O2C1C2117.2°120.0°
C1O2H7109.5°117.0°
C1C2N1113.6°109.5°
C1C2H1108.4°109.5°
C1C2H2108.5°109.5°
C2N1C3120.7°120.7°
C2N1C9124.1°120.7°
N1C2H1108.4°109.4°
N1C2H2108.4°109.5°
N1C3O3125.9°126.9°
N1C3S1109.7°106.2°
C3N1C9115.2°118.6°
O3C3S1124.4°126.9°
C3S1C491.1°94.7°
S1C4C5127.6°132.4°
S1C4C9111.1°106.1°
C4C5C6117.9°119.9°
C5C4C9121.2°121.6°
C4C5H3121.0°120.1°
C5C6C7120.5°119.4°
C6C5H3121.0°120.0°
C5C6H4119.8°120.3°
C6C7C8122.0°120.9°
C7C6H4119.7°120.3°
C6C7H5119.0°119.6°
C7C8C9117.5°120.7°
C8C7H5119.0°119.6°
C7C8H6121.2°119.7°
C8C9N1126.4°128.0°
C8C9C4120.8°117.5°
C9C8H6121.3°119.6°
N1C9C4112.8°114.5°
H1C2H2109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1C1O2C2179.9°179.7°
O1C1C2N1163.1°0.0°
O1C1O2H70.0°0.0°
O1C1C2H142.5°120.0°
O1C1C2H276.3°120.0°
O2C1C2N116.8°179.7°
O2C1C2H1137.4°60.3°
O2C1C2H2103.8°59.8°
C1C2N1H1120.6°120.0°
C1C2N1H2120.6°120.0°
C1C2N1C389.9°90.0°
C1C2N1C989.1°90.2°
C2C1O2H7179.9°179.7°
C1C2H1H2118.1°120.0°
C2N1C3C9179.0°179.8°
C2N1C3O30.4°0.1°
C2N1C3S1178.4°180.0°
C2N1C9C82.1°0.6°
C2N1C9C4177.4°179.8°
N1C2H1H2118.1°120.0°
N1C3O3S1178.6°179.9°
N1C3S1C40.3°0.0°
C3N1C9C8178.9°179.6°
C3N1C9C41.6°0.4°
C3N1C2H1149.5°30.0°
C3N1C2H230.8°150.0°
O3C3S1C4178.5°180.0°
O3C3N1C9179.5°179.7°
C3S1C4C5178.6°180.0°
S1C3N1C90.7°0.2°
C3S1C4C91.1°0.3°
S1C4C5C9177.2°179.7°
S1C4C5C6176.7°180.0°
S1C4C9C8178.7°179.7°
S1C4C9N11.7°0.4°
S1C4C5H33.3°0.0°
C4C5C6H3180.0°180.0°
C4C5C6C72.0°0.1°
C5C4C9C81.1°0.5°
C5C4C9N1179.4°179.8°
C4C5C6H4178.0°180.0°
C5C6C7H4180.0°179.9°
C5C6C7C82.1°0.1°
C6C5C4C90.5°0.2°
C5C6C7H5178.0°180.0°
C6C7C8H5180.0°179.9°
C6C7C8C90.5°0.2°
C7C6C5H3177.9°180.0°
C6C7C8H6179.6°179.9°
C7C8C9H6180.0°179.7°
C7C8C9N1179.4°179.7°
C7C8C9C41.1°0.5°
C8C7C6H4177.9°180.0°
C8C9N1C4179.6°179.2°
C9C8C7H5179.6°179.7°
C9N1C2H131.6°149.8°
C9N1C2H2150.3°29.8°
N1C9C8H60.6°0.6°
C9C4C5H3179.5°179.7°
C4C9C8H6178.9°179.8°
H3C5C6H42.0°0.0°
H4C6C7H52.0°0.1°
H5C7C8H60.4°0.0°

258009

PDB entries from 2026-08-12

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