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A1DN1

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O1C1doub1.22Å1.22Å
C1N1sing1.35Å1.36Å
N1C2sing1.41Å1.41Å
C2C3sing1.42Å1.40ÅAromatic
C3N2doub1.30Å1.29ÅAromatic
N2O2sing1.21Å1.42ÅAromatic
O2C4sing1.34Å1.34ÅAromatic
C1C5sing1.47Å1.47Å
C5C6doub1.37Å1.38ÅAromatic
C6C7sing1.38Å1.41ÅAromatic
C7C8doub1.34Å1.33ÅAromatic
C8S1sing1.71Å1.69ÅAromatic
C2C4doub1.36Å1.39ÅAromatic
C5S1sing1.76Å1.71ÅAromatic
N1H1sing0.97Å1.00Å
C3H2sing1.08Å1.08Å
C4H3sing1.08Å1.08Å
C6H4sing1.08Å1.08Å
C7H5sing1.08Å1.08Å
C8H6sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1C1N1123.2°120.0°
O1C1C5117.3°120.0°
C1N1C2125.0°120.1°
N1C1C5119.5°120.0°
C1N1H1117.5°120.0°
N1C2C3127.1°128.1°
N1C2C4125.4°128.0°
C2N1H1117.5°120.0°
C2C3N2110.3°106.4°
C3C2C4107.4°103.9°
C2C3H2124.8°126.8°
C3N2O2106.4°111.8°
N2C3H2124.8°126.8°
N2O2C4110.1°111.6°
O2C4C2105.7°106.3°
O2C4H3127.1°126.8°
C1C5C6131.4°125.5°
C1C5S1116.7°125.4°
C5C6C7109.8°113.3°
C6C5S1111.9°109.1°
C5C6H4125.1°123.4°
C6C7C8113.8°115.1°
C7C6H4125.1°123.3°
C6C7H5123.1°122.4°
C7C8S1112.5°110.9°
C8C7H5123.1°122.4°
C7C8H6123.8°124.5°
C8S1C591.1°91.6°
S1C8H6123.8°124.5°
C2C4H3127.1°126.9°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1C1N1C5179.7°179.7°
O1C1N1C222.4°0.0°
O1C1C5C6160.1°0.0°
O1C1C5S120.8°179.7°
O1C1N1H1157.7°180.0°
C1N1C2H1180.0°180.0°
C1N1C2C322.0°180.0°
N1C1C5C620.2°179.7°
C1N1C2C4154.1°0.3°
N1C1C5S1158.9°0.6°
N1C2C3C4176.7°179.8°
N1C2C3N2178.3°180.0°
N1C2C4O2177.5°179.9°
C2N1C1C5158.0°179.7°
N1C2C3H21.7°0.1°
N1C2C4H32.5°0.1°
C2C3N2H2180.0°180.0°
C2C3N2O21.8°0.0°
C3C2C4O20.7°0.3°
C3C2N1H1158.0°0.0°
C3C2C4H3179.3°179.7°
C3N2O2C41.3°0.2°
N2C3C2C41.6°0.2°
N2O2C4C20.3°0.4°
O2N2C3H2178.2°180.0°
N2O2C4H3179.7°179.6°
O2C4C2H3180.0°180.0°
C1C5C6S1179.1°179.7°
C1C5C6C7172.4°180.0°
C1C5S1C8176.9°179.9°
C5C1N1H122.0°0.3°
C1C5C6H47.7°0.0°
C5C6C7H4180.0°180.0°
C5C6C7C810.5°0.0°
C6C5S1C83.9°0.4°
C5C6C7H5169.5°180.0°
C6C7C8H5180.0°180.0°
C6C7C8S17.7°0.3°
C7C6C5S18.6°0.3°
C6C7C8H6172.3°180.0°
C7C8S1H6180.0°179.7°
C7C8S1C52.2°0.4°
C8C7C6H4169.5°180.0°
S1C8C7H5172.3°179.7°
C4C2N1H125.9°179.7°
C4C2C3H2178.4°179.8°
S1C5C6H4171.4°179.8°
C5S1C8H6177.8°179.9°
H4C6C7H510.5°0.0°
H5C7C8H67.7°0.0°

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PDB entries from 2026-08-05

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