Loading
PDBj
English日本語简体中文繁體中文한국어
✖
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
SummaryGeometryRelated PDB entries

A1DG5

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C17C16sing1.55Å1.52Å
C17C13sing1.54Å1.57Å
C16C15sing1.55Å1.56Å
O21C20doub1.21Å1.18Å
C13C14sing1.54Å1.58Å
C13N12sing1.46Å1.51Å
N19C20sing1.35Å1.42Å
N19C18sing1.40Å1.40Å
C14C15sing1.54Å1.51Å
C20C08sing1.50Å1.58Å
N12C18sing1.34Å1.41ÅAromatic
N12N11sing1.41Å1.40ÅAromatic
C18C09doub1.37Å1.39ÅAromatic
C08C07sing1.53Å1.50Å
N11C10doub1.31Å1.38ÅAromatic
C09C07sing1.51Å1.53Å
C09C10sing1.39Å1.43ÅAromatic
C07C06sing1.51Å1.60Å
C06C05doub1.38Å1.40ÅAromatic
C06C22sing1.38Å1.43ÅAromatic
C05C04sing1.38Å1.41ÅAromatic
C22C02doub1.39Å1.41ÅAromatic
C04C03doub1.38Å1.39ÅAromatic
C02C03sing1.39Å1.42ÅAromatic
C02O01sing1.36Å1.39Å
C10H101sing1.08Å1.08Å
C13H131sing1.09Å1.10Å
C15H151sing1.09Å1.10Å
C15H152sing1.09Å1.10Å
C17H171sing1.09Å1.10Å
C17H172sing1.09Å1.10Å
C22H221sing1.08Å1.08Å
C03H031sing1.08Å1.08Å
C04H041sing1.08Å1.08Å
C05H051sing1.08Å1.08Å
C07H071sing1.09Å1.10Å
C08H081sing1.09Å1.10Å
C08H082sing1.09Å1.10Å
C14H142sing1.09Å1.10Å
C14H141sing1.09Å1.10Å
C16H161sing1.09Å1.10Å
C16H162sing1.09Å1.10Å
N19H191sing0.97Å1.00Å
O01H011sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C16C17C13108.4°104.2°
C17C16C15106.1°102.7°
C16C17H171109.7°110.5°
C16C17H172109.7°110.5°
C17C16H161110.3°110.8°
C17C16H162110.3°110.7°
C17C13C14104.0°106.6°
C17C13N12113.2°110.0°
C17C13H131107.7°110.1°
C13C17H171109.7°110.5°
C13C17H172109.8°110.5°
C16C15C14105.3°104.2°
C16C15H151110.5°110.5°
C16C15H152110.5°110.6°
C15C16H161110.3°110.7°
C15C16H162110.3°110.7°
O21C20N19124.9°118.8°
O21C20C08118.2°118.9°
C14C13N12115.6°110.1°
C13C14C15106.7°106.6°
C14C13H131107.6°110.1°
C13C14H142110.2°110.0°
C13C14H141110.2°110.1°
C13N12C18132.5°126.2°
C13N12N11120.5°126.1°
N12C13H131108.4°110.0°
C20N19C18120.1°118.0°
N19C20C08116.9°122.3°
C20N19H191119.9°121.0°
N19C18N12133.0°130.6°
N19C18C09116.9°121.7°
C18N19H191120.0°120.9°
C14C15H151110.5°110.5°
C14C15H152110.5°110.5°
C15C14H142110.2°110.0°
C15C14H141110.2°110.1°
C20C08C07108.4°111.6°
C20C08H081109.7°109.0°
C20C08H082109.8°109.1°
C18N12N11107.0°107.7°
N12C18C09110.1°107.8°
N12N11C10108.1°108.5°
C18C09C07124.1°122.3°
C18C09C10104.9°107.9°
C08C07C09104.7°108.4°
C08C07C06106.6°109.7°
C08C07H071106.9°109.6°
C07C08H081109.8°109.2°
C07C08H082109.7°108.9°
N11C10C09109.9°108.1°
N11C10H101125.0°126.0°
C07C09C10131.0°129.8°
C09C07C06125.3°109.5°
C09C07H071106.4°109.8°
C09C10H101125.1°125.9°
C07C06C05113.2°120.0°
C07C06C22129.6°120.0°
C06C07H071105.8°109.7°
C05C06C22117.2°120.0°
C06C05C04121.0°120.1°
C06C05H051119.5°119.9°
C06C22C02122.0°120.0°
C06C22H221119.0°120.0°
C05C04C03121.5°120.0°
C05C04H041119.2°120.0°
C04C05H051119.5°119.9°
C22C02C03119.3°119.9°
C22C02O01122.9°120.1°
C02C22H221119.0°120.0°
C04C03C02119.0°119.9°
C04C03H031120.5°120.0°
C03C04H041119.2°120.0°
C03C02O01117.8°120.0°
C02C03H031120.5°120.0°
C02O01H011109.5°114.0°
H151C15H152109.5°110.5°
H171C17H172109.4°110.5°
H081C08H082109.5°109.0°
H142C14H141109.5°110.0°
H161C16H162109.5°110.9°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C16C17C13H171119.8°118.7°
C16C17C13H172119.9°118.7°
C17C16C15H161119.5°118.3°
C17C16C15H162119.5°118.3°
C16C17C13C144.0°23.6°
C16C17C13N12122.2°142.9°
C17C16C15C1428.6°37.9°
C16C17C13H131118.0°95.7°
C17C16C15H15190.8°156.6°
C17C16C15H152147.9°80.8°
C16C17H171H172120.5°122.6°
C17C16H161H162121.5°123.4°
C13C17C16C1514.7°37.9°
C17C13C14N12124.7°119.3°
C17C13C14H131114.1°119.4°
C17C13N12H131119.4°121.4°
C17C13C14C1521.9°0.0°
C17C13N12C18114.1°122.8°
C17C13N12N1165.8°57.4°
C13C17H171H172120.5°122.6°
C17C13C14H14297.6°119.3°
C17C13C14H141141.5°119.3°
C13C17C16H161134.1°80.3°
C13C17C16H162104.8°156.2°
C16C15C14C1331.3°23.6°
C16C15C14H151119.3°118.7°
C16C15C14H152119.3°118.7°
C16C15H151H152122.0°122.7°
C15C16C17H171134.5°80.7°
C15C16C17H172105.2°156.6°
C16C15C14H14288.3°95.7°
C16C15C14H141150.8°142.9°
C15C16H161H162121.5°123.3°
O21C20N19C08177.2°179.9°
O21C20N19C18179.2°173.3°
O21C20C08C07138.4°143.5°
O21C20C08H081101.8°22.9°
O21C20C08H08218.6°96.1°
O21C20N19H1910.8°6.7°
C14C13N12H131120.9°121.5°
C13C14C15H142119.6°119.3°
C13C14C15H141119.6°119.4°
C14C13N12C18126.2°120.0°
C14C13N12N1153.9°59.7°
C13C14C15H15188.1°142.3°
C13C14C15H152150.6°95.2°
C14C13C17H171115.8°95.1°
C14C13C17H172123.9°142.3°
C13C14H142H141121.3°121.4°
C13N12C18N190.0°0.1°
N12C13C14C15102.7°119.3°
C13N12C18N11179.9°179.8°
C13N12C18C09180.0°179.9°
C13N12N11C10179.9°179.8°
N12C13C17H171118.0°24.2°
N12C13C17H1722.3°98.4°
N12C13C14H142137.7°121.4°
N12C13C14H14116.8°0.1°
C20N19C18H191180.0°180.0°
C20N19C18N12158.8°166.9°
C20N19C18C0921.2°13.1°
N19C20C08C0744.2°36.3°
N19C20C08H08175.6°157.0°
N19C20C08H082164.1°84.1°
C18N19C20C082.0°6.5°
N19C18N12C09180.0°180.0°
N19C18N12N11180.0°179.7°
N19C18C09C071.2°0.1°
N19C18C09C10179.9°179.9°
C15C14C13H131136.0°119.3°
C14C15H151H152121.9°122.5°
C15C14H142H141121.3°121.4°
C14C15C16H161148.0°80.4°
C14C15C16H16290.9°156.2°
C20C08C07H081119.8°120.5°
C20C08C07H082119.8°120.5°
C20C08C07C0957.2°43.6°
C20C08C07C06168.2°76.0°
C20C08C07H07155.4°163.5°
C20C08H081H082120.5°119.0°
C08C20N19H191177.9°173.4°
C18N12N11C100.1°0.4°
N12C18C09C07178.8°179.9°
N12C18C09C100.1°0.1°
C18N12C13H1315.3°1.4°
N12C18N19H19121.2°13.1°
N11N12C18C090.0°0.3°
N12N11C10C090.2°0.3°
N12N11C10H101179.8°179.9°
N11N12C13H131174.7°178.8°
C18C09C07C0839.7°28.9°
C18C09C10N110.1°0.1°
C18C09C07C10178.4°180.0°
C18C09C07C06163.0°90.7°
C18C09C10H101179.9°179.9°
C18C09C07H07173.2°148.7°
C09C18N19H191158.8°166.9°
C08C07C09C06123.2°119.6°
C08C07C09H071113.0°119.8°
C08C07C09C10138.6°151.1°
C08C07C06H071113.5°120.5°
C08C07C06C05135.9°59.5°
C08C07C06C2244.3°120.0°
C07C08H081H082120.5°118.9°
N11C10C09C07178.8°179.8°
N11C10C09H101180.0°179.8°
C09C07C06H071124.1°120.7°
C09C07C06C05101.7°59.3°
C09C07C06C2278.1°121.1°
C07C09C10H1011.3°0.0°
C09C07C08H08162.6°164.1°
C09C07C08H082177.1°76.9°
C10C09C07C0615.4°89.2°
C10C09C07H071108.4°31.4°
C07C06C05C22179.9°179.5°
C07C06C05C04179.9°180.0°
C07C06C22C02179.9°180.0°
C07C06C22H2210.1°0.3°
C07C06C05H0510.0°0.2°
C06C07C08H08172.0°44.6°
C06C07C08H08248.3°163.6°
C06C05C04H051180.0°179.8°
C05C06C22C020.1°0.5°
C06C05C04C030.0°0.2°
C05C06C22H221179.9°179.8°
C06C05C04H041180.0°179.7°
C05C06C07H07122.4°180.0°
C22C06C05C040.1°0.5°
C06C22C02H221180.0°179.7°
C06C22C02C030.1°0.3°
C06C22C02O01180.0°179.8°
C22C06C05H051179.9°179.7°
C22C06C07H071157.8°0.5°
C05C04C03H041180.0°179.9°
C05C04C03C020.0°0.0°
C05C04C03H031180.0°180.0°
C22C02C03C040.0°0.0°
C22C02C03O01180.0°180.0°
C22C02C03H031180.0°180.0°
C22C02O01H011180.0°90.0°
C04C03C02H031180.0°180.0°
C04C03C02O01180.0°180.0°
C03C04C05H051180.0°180.0°
C03C02C22H221179.9°180.0°
C02C03C04H041180.0°179.9°
C03C02O01H0110.0°90.0°
O01C02C22H2210.0°0.1°
O01C02C03H0310.0°0.0°
H131C13C17H1711.8°145.6°
H131C13C17H172122.1°22.9°
H131C13C14H14216.4°0.0°
H131C13C14H141104.4°121.3°
H151C15C14H142152.4°23.0°
H151C15C14H14131.5°98.4°
H151C15C16H16128.7°38.3°
H151C15C16H162149.8°85.1°
H152C15C14H14231.1°145.5°
H152C15C14H14189.8°24.2°
H152C15C16H16192.6°160.9°
H152C15C16H16228.4°37.5°
H171C17C16H161106.0°161.0°
H171C17C16H16215.0°37.5°
H172C17C16H16114.3°38.4°
H172C17C16H162135.3°85.1°
H031C03C04H0410.0°0.1°
H041C04C05H0510.0°0.1°
H071C07C08H081175.2°76.0°
H071C07C08H08264.4°43.0°

254917

PDB entries from 2026-06-10

PDB statisticsPDBj update infoContact PDBjnumon