Loading
PDBj
✖
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

A1DBL

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C15C16sing1.55Å1.53Å
C15O1sing1.43Å1.42Å
C16O2sing1.43Å1.42Å
O1C14sing1.36Å1.37Å
O2C17sing1.36Å1.38Å
C14C17doub1.39Å1.42ÅAromatic
C14C13sing1.39Å1.41ÅAromatic
C17C18sing1.39Å1.41ÅAromatic
C13C12doub1.38Å1.40ÅAromatic
C3C2sing1.53Å1.54Å
C18C11doub1.38Å1.41ÅAromatic
C2C1sing1.53Å1.54Å
C2C4sing1.53Å1.55Å
C12C11sing1.38Å1.41ÅAromatic
C11C4sing1.51Å1.52Å
C4N1sing1.46Å1.45Å
N1C5sing1.38Å1.40Å
CL1C9sing1.74Å1.69Å
C5N2doub1.33Å1.36ÅAromatic
C5C8sing1.40Å1.42ÅAromatic
C9C8sing1.46Å1.43ÅAromatic
C9C10doub1.34Å1.37ÅAromatic
N2C6sing1.32Å1.33ÅAromatic
C8C7doub1.41Å1.42ÅAromatic
C10N4sing1.37Å1.38ÅAromatic
C6N3doub1.32Å1.33ÅAromatic
C7N4sing1.37Å1.38ÅAromatic
C7N3sing1.33Å1.36ÅAromatic
C3H6sing1.09Å1.10Å
C3H7sing1.09Å1.10Å
C3H5sing1.09Å1.10Å
C6H10sing1.08Å1.08Å
C12H13sing1.08Å1.08Å
C1H1sing1.09Å1.10Å
C1H2sing1.09Å1.10Å
C1H3sing1.09Å1.10Å
C10H11sing1.08Å1.08Å
C13H14sing1.08Å1.08Å
C15H16sing1.09Å1.10Å
C15H15sing1.09Å1.10Å
C16H18sing1.09Å1.10Å
C16H17sing1.09Å1.10Å
C18H19sing1.08Å1.08Å
C2H4sing1.09Å1.10Å
C4H8sing1.09Å1.10Å
N1H9sing0.97Å1.00Å
N4H12sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C16C15O1110.0°107.6°
C15C16O2110.0°107.6°
C16C15H16109.3°109.7°
C16C15H15109.4°109.7°
C15C16H18109.4°109.8°
C15C16H17109.4°109.7°
C15O1C14113.8°116.7°
O1C15H16109.3°110.9°
O1C15H15109.3°109.1°
C16O2C17114.9°116.7°
O2C16H18109.4°111.0°
O2C16H17109.3°109.0°
O1C14C17121.3°120.8°
O1C14C13118.8°119.4°
O2C17C14121.6°120.8°
O2C17C18118.8°119.4°
C17C14C13119.9°119.8°
C14C17C18119.6°119.8°
C14C13C12120.4°120.1°
C14C13H14119.8°120.0°
C17C18C11120.3°120.1°
C17C18H19119.8°120.0°
C13C12C11120.0°120.1°
C13C12H13120.0°120.0°
C12C13H14119.8°119.9°
C3C2C1109.0°109.4°
C3C2C4111.7°109.5°
C2C3H6109.5°109.5°
C2C3H7109.4°109.5°
C2C3H5109.4°109.5°
C3C2H4107.8°109.5°
C18C11C12119.8°120.1°
C18C11C4119.5°119.9°
C11C18H19119.8°119.9°
C1C2C4112.7°109.5°
C2C1H1109.5°109.5°
C2C1H2109.5°109.5°
C2C1H3109.5°109.5°
C1C2H4107.8°109.5°
C2C4C11112.8°109.5°
C2C4N1111.1°109.5°
C4C2H4107.6°109.5°
C2C4H8107.3°109.5°
C12C11C4120.7°119.9°
C11C12H13120.0°119.9°
C11C4N1109.4°109.5°
C11C4H8107.7°109.5°
C4N1C5124.3°120.1°
N1C4H8108.5°109.4°
C4N1H9105.6°120.0°
N1C5N2121.3°120.8°
N1C5C8119.5°120.9°
C5N1H9105.6°119.9°
CL1C9C8122.1°126.5°
CL1C9C10129.7°126.6°
N2C5C8119.2°118.3°
C5N2C6119.1°121.0°
C5C8C9137.5°135.1°
C5C8C7115.5°118.7°
C8C9C10108.1°106.9°
C9C8C7107.0°106.2°
C9C10N4108.1°109.7°
C9C10H11126.0°125.2°
N2C6N3127.7°122.8°
N2C6H10116.1°118.6°
C8C7N4106.5°107.2°
C8C7N3125.3°118.5°
C10N4C7110.3°110.0°
N4C10H11126.0°125.1°
C10N4H12124.8°125.0°
C6N3C7113.1°120.7°
N3C6H10116.1°118.6°
N4C7N3128.2°134.2°
C7N4H12124.9°125.0°
H6C3H7109.5°109.4°
H6C3H5109.5°109.5°
H7C3H5109.5°109.4°
H1C1H2109.4°109.5°
H1C1H3109.5°109.5°
H2C1H3109.4°109.4°
H16C15H15109.5°109.7°
H18C16H17109.4°109.7°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C16C15O1H16120.1°120.0°
C16C15O1H15120.1°118.9°
C15C16O2H18120.1°120.1°
C15C16O2H17120.1°118.9°
C16C15O1C1448.0°47.0°
C15C16O2C1743.1°47.1°
C16C15H16H15119.8°120.6°
C15C16H18H17119.8°120.7°
O1C15C16O261.5°60.9°
C15O1C14C1718.7°17.3°
C15O1C14C13161.1°162.1°
O1C15H16H15119.7°120.7°
O1C15C16H1858.6°60.0°
O1C15C16H17178.4°179.3°
C16O2C17C1413.9°17.5°
C16O2C17C18166.0°162.0°
O2C16C15H1658.6°59.9°
O2C16C15H15178.5°179.5°
O2C16H18H17119.7°120.5°
O1C14C17O20.2°0.2°
O1C14C17C13179.8°179.4°
O1C14C17C18179.8°179.7°
O1C14C13C12179.8°180.0°
O1C14C13H140.2°0.0°
C14O1C15H1672.1°73.0°
C14O1C15H15168.1°165.9°
O2C17C14C18179.9°179.5°
O2C17C14C13179.9°179.6°
O2C17C18C11179.9°179.9°
C17O2C16H1877.0°73.0°
C17O2C16H17163.2°166.1°
O2C17C18H190.1°0.3°
C17C14C13C120.0°0.6°
C14C17C18C110.1°0.5°
C17C14C13H14180.0°179.4°
C14C17C18H19179.8°179.8°
C13C14C17C180.0°0.9°
C14C13C12H14180.0°180.0°
C14C13C12C110.1°0.0°
C14C13C12H13179.9°179.7°
C17C18C11H19180.0°179.6°
C17C18C11C120.2°0.1°
C17C18C11C4179.9°179.9°
C13C12C11C180.2°0.4°
C13C12C11H13180.0°179.6°
C13C12C11C4179.9°179.7°
C3C2C1C4124.7°120.0°
C3C2C1H4116.7°120.0°
C3C2C4H4118.1°120.0°
C3C2C4C1166.5°60.0°
C3C2C4N1170.3°179.9°
C2C3H6H7120.0°120.0°
C2C3H6H5120.0°120.1°
C2C3H7H5119.9°120.0°
C3C2C1H1180.0°60.0°
C3C2C1H260.0°180.0°
C3C2C1H360.0°60.1°
C3C2C4H851.8°60.0°
C18C11C4C273.2°100.1°
C18C11C12C4179.7°179.9°
C18C11C4N150.9°139.9°
C18C11C12H13179.8°180.0°
C18C11C4H8168.6°20.0°
C1C2C4H4118.7°120.0°
C1C2C4C11170.3°180.0°
C1C2C4N147.1°60.0°
C1C2C3H6180.0°60.1°
C1C2C3H760.0°180.0°
C1C2C3H560.0°60.0°
C2C1H1H2120.0°120.0°
C2C1H1H3120.0°120.0°
C2C1H2H3120.0°120.0°
C1C2C4H871.4°60.0°
C2C4C11C12107.1°80.0°
C2C4C11N1124.1°120.0°
C2C4C11H8118.1°120.0°
C2C4N1H8117.7°120.0°
C2C4N1C5129.1°85.0°
C4C2C3H654.7°180.0°
C4C2C3H765.3°60.0°
C4C2C3H5174.7°60.0°
C4C2C1H155.3°60.0°
C4C2C1H2175.3°60.0°
C4C2C1H364.7°180.0°
C2C4N1H9108.8°95.0°
C12C11C4N1128.8°40.0°
C11C12C13H14179.9°179.9°
C12C11C18H19179.7°179.5°
C12C11C4H811.0°160.0°
C11C4N1H8117.2°120.0°
C11C4N1C5105.7°155.0°
C4C11C12H130.1°0.0°
C4C11C18H190.1°0.4°
C11C4C2H451.6°60.0°
C11C4N1H916.3°25.0°
C4N1C5H9122.0°179.9°
C4N1C5N210.9°0.0°
C4N1C5C8169.6°180.0°
N1C4C2H471.6°60.0°
N1C5N2C8179.5°179.9°
N1C5C8C90.8°0.2°
N1C5N2C6179.7°179.9°
N1C5C8C7179.7°180.0°
C5N1C4H811.5°35.0°
CL1C9C8C50.4°0.1°
CL1C9C8C10179.7°180.0°
CL1C9C8C7180.0°180.0°
CL1C9C10N4179.9°179.9°
CL1C9C10H110.0°0.1°
N2C5C8C9179.7°179.9°
N2C5C8C70.2°0.0°
C5N2C6N30.2°0.0°
C5N2C6H10179.8°180.0°
N2C5N1H9132.9°180.0°
C5C8C9C7179.5°179.9°
C5C8C9C10179.8°179.9°
C8C5N2C60.2°0.0°
C5C8C7N4179.9°179.9°
C5C8C7N30.1°0.0°
C8C5N1H947.6°0.1°
C8C9C10N40.2°0.0°
C9C8C7N40.3°0.0°
C9C8C7N3179.7°179.9°
C8C9C10H11179.7°179.9°
C10C9C8C70.3°0.0°
C9C10N4H11180.0°179.9°
C9C10N4C70.1°0.0°
C9C10N4H12179.9°179.9°
N2C6N3H10180.0°179.9°
N2C6N3C70.1°0.1°
C8C7N4C100.1°0.0°
C8C7N3C60.0°0.0°
C8C7N4N3180.0°179.9°
C8C7N4H12179.9°179.9°
C10N4C7H12180.0°179.9°
C10N4C7N3179.9°179.9°
C6N3C7N4180.0°179.9°
C7N4C10H11179.9°179.9°
C7N3C6H10179.9°180.0°
N3C7N4H120.1°0.2°
H6C3H7H5120.0°120.0°
H6C3C2H463.3°59.9°
H7C3C2H4176.7°60.1°
H5C3C2H456.7°180.0°
H13C12C13H140.1°0.3°
H1C1H2H3120.0°120.0°
H1C1C2H463.3°180.0°
H2C1C2H456.7°60.1°
H3C1C2H4176.7°59.9°
H11C10N4H120.1°0.0°
H16C15C16H18178.7°179.2°
H16C15C16H1761.5°58.5°
H15C15C16H1861.4°58.6°
H15C15C16H1758.4°62.1°
H4C2C4H8170.0°180.0°
H8C4N1H9133.5°145.0°

260320

PDB entries from 2026-09-30

PDB statisticsPDBj update infoContact PDBjnumon