Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

A1D62

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1O1sing1.43Å1.42Å
O1C2sing1.36Å1.37Å
C2C3doub1.39Å1.38ÅAromatic
C3CL1sing1.74Å1.74Å
C3C4sing1.38Å1.38ÅAromatic
C4C5doub1.38Å1.39ÅAromatic
C5C6sing1.51Å1.52Å
C6C7sing1.51Å1.53Å
C7C8doub1.39Å1.39ÅAromatic
C8C9sing1.38Å1.39ÅAromatic
C9C10doub1.39Å1.39ÅAromatic
C10C11sing1.38Å1.39ÅAromatic
C11C12doub1.39Å1.40ÅAromatic
C12C13sing1.51Å1.51Å
C13C14sing1.53Å1.49Å
C14C15sing1.52Å1.51Å
C15O2doub1.21Å1.21Å
C15N1sing1.35Å1.36Å
N1C16sing1.34Å1.39Å
C16O3doub1.22Å1.22Å
C16N2sing1.33Å1.35Å
C10O4sing1.36Å1.37Å
O4C17sing1.43Å1.44Å
C17C18sing1.53Å1.48Å
C18O5sing1.43Å1.44Å
C5C19sing1.38Å1.39ÅAromatic
C19C20doub1.38Å1.38ÅAromatic
C20CL2sing1.74Å1.74Å
C2C20sing1.39Å1.39ÅAromatic
C6N2sing1.46Å1.47Å
C7C12sing1.38Å1.40ÅAromatic
C14N2sing1.48Å1.46Å
C9O5sing1.36Å1.37Å
N1H11sing0.97Å1.00Å
C4H4sing1.08Å1.08Å
C6H5sing1.09Å1.10Å
C8H6sing1.08Å1.08Å
C13H8sing1.09Å1.10Å
C13H9sing1.09Å1.10Å
C17H13sing1.09Å1.10Å
C17H12sing1.09Å1.10Å
C1H2sing1.09Å1.10Å
C1H1sing1.09Å1.10Å
C1H3sing1.09Å1.10Å
C11H7sing1.08Å1.08Å
C14H10sing1.09Å1.10Å
C18H15sing1.09Å1.10Å
C18H14sing1.09Å1.10Å
C19H16sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1O1C2116.1°117.0°
O1C1H2109.5°109.5°
O1C1H1109.4°109.4°
O1C1H3109.5°109.5°
O1C2C3109.6°120.1°
O1C2C20131.3°120.0°
C2C3CL1117.4°120.0°
C2C3C4120.9°120.0°
C3C2C20119.1°119.9°
CL1C3C4121.6°120.0°
C3C4C5119.9°120.0°
C3C4H4120.0°120.0°
C4C5C6121.0°119.9°
C4C5C19119.1°120.1°
C5C4H4120.1°120.0°
C5C6C7112.5°109.6°
C6C5C19119.9°120.0°
C5C6N2111.1°109.6°
C5C6H5107.6°109.6°
C6C7C8119.1°117.4°
C7C6N2109.6°108.5°
C6C7C12121.6°122.5°
C7C6H5107.5°109.8°
C7C8C9120.3°120.6°
C8C7C12119.3°120.2°
C7C8H6119.8°119.7°
C8C9C10120.0°119.5°
C8C9O5117.5°119.7°
C9C8H6119.8°119.7°
C9C10C11120.5°119.6°
C9C10O4122.5°120.7°
C10C9O5122.5°120.8°
C10C11C12119.5°120.9°
C11C10O4116.5°119.7°
C10C11H7120.2°119.6°
C11C12C13118.2°116.9°
C11C12C7120.2°119.3°
C12C11H7120.2°119.6°
C12C13C14106.7°111.2°
C13C12C7121.6°123.9°
C12C13H8110.2°109.1°
C12C13H9110.2°109.1°
C13C14C15113.1°109.9°
C13C14N2108.2°106.8°
C14C13H8110.2°109.2°
C14C13H9110.2°109.2°
C13C14H10111.5°112.0°
C14C15O2126.6°127.1°
C14C15N1108.1°105.9°
C15C14N2100.6°102.9°
C15C14H10111.1°112.1°
O2C15N1125.3°127.1°
C15N1C16111.2°111.7°
C15N1H11124.4°124.1°
N1C16O3126.4°123.9°
N1C16N2107.4°112.1°
C16N1H11124.4°124.2°
O3C16N2125.9°124.0°
C16N2C6126.7°130.3°
C16N2C14112.2°107.3°
C10O4C17117.8°116.7°
O4C17C18118.2°108.3°
O4C17H13107.2°109.6°
O4C17H12107.3°109.8°
C17C18O5117.3°108.2°
C18C17H13107.2°109.7°
C18C17H12107.2°109.7°
C17C18H15107.5°109.7°
C17C18H14107.5°109.7°
C18O5C9118.0°116.7°
O5C18H15107.5°109.6°
O5C18H14107.5°109.7°
C5C19C20120.7°120.1°
C5C19H16119.7°120.0°
C19C20CL2118.9°120.0°
C19C20C2120.2°119.9°
C20C19H16119.6°120.0°
CL2C20C2120.9°120.1°
C6N2C14121.0°122.4°
N2C6H5108.3°109.7°
N2C14H10111.9°112.8°
H8C13H9109.4°109.1°
H13C17H12109.5°109.7°
H2C1H1109.5°109.4°
H2C1H3109.4°109.5°
H1C1H3109.5°109.5°
H15C18H14109.5°109.7°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1O1C2C3168.4°90.1°
C1O1C2C2012.4°90.0°
O1C1H2H1120.0°119.9°
O1C1H2H3120.0°120.0°
O1C1H1H3120.0°120.0°
O1C2C3C20179.3°179.9°
O1C2C3CL10.3°0.1°
O1C2C3C4179.7°179.4°
O1C2C20C19179.9°179.1°
O1C2C20CL20.5°0.3°
C2O1C1H2180.0°180.0°
C2O1C1H160.0°60.0°
C2O1C1H360.0°60.0°
C2C3CL1C4179.9°179.5°
C2C3C4C50.2°0.0°
C3C2C20C190.7°0.8°
C3C2C20CL2179.7°179.8°
C2C3C4H4179.8°179.8°
CL1C3C4C5179.7°179.5°
CL1C3C2C20179.6°180.0°
CL1C3C4H40.3°0.3°
C3C4C5H4180.0°179.8°
C3C4C5C6179.8°179.7°
C3C4C5C190.5°0.1°
C4C3C2C200.3°0.5°
C4C5C6C19179.3°179.8°
C4C5C6C734.8°66.3°
C4C5C19C200.9°0.1°
C4C5C6N288.5°52.7°
C4C5C6H5153.1°173.1°
C4C5C19H16179.1°179.9°
C5C6C7N2124.1°119.7°
C5C6C7H5118.3°120.5°
C5C6C7C849.5°67.7°
C5C6N2C1672.2°100.0°
C6C5C19C20179.8°180.0°
C5C6N2H5118.0°120.4°
C5C6C7C12132.5°112.2°
C5C6N2C14103.0°80.6°
C6C5C4H40.2°0.1°
C6C5C19H160.2°0.1°
C6C7C8C12178.0°179.9°
C6C7C8C9179.3°179.5°
C6C7C12C11179.8°179.1°
C6C7C12C130.2°1.9°
C7C6N2C16162.9°140.3°
C7C6C5C19144.4°113.5°
C7C6N2H5117.0°119.9°
C7C6N2C1422.0°39.1°
C6C7C8H60.8°0.5°
C7C8C9H6180.0°180.0°
C7C8C9C100.2°0.0°
C8C7C12C112.2°0.8°
C8C7C12C13178.2°178.2°
C8C7C6N2173.6°172.6°
C7C8C9O5177.9°179.7°
C8C7C6H568.8°52.7°
C8C9C10O5177.6°179.7°
C8C9C10C113.7°0.2°
C8C9C10O4175.3°180.0°
C8C9O5C18177.2°163.1°
C9C8C7C122.7°0.5°
C9C10C11O4172.1°179.9°
C9C10C11C124.2°0.2°
C9C10O4C171.3°17.1°
C10C9O5C180.5°17.2°
C10C9C8H6179.8°179.9°
C9C10C11H7175.9°179.8°
C10C11C12H7180.0°180.0°
C10C11C12C13178.4°178.4°
C11C10O4C17170.7°163.1°
C10C11C12C71.2°0.7°
C11C10C9O5178.7°179.9°
C11C12C13C7179.6°179.0°
C11C12C13C14144.7°158.5°
C12C11C10O4176.2°179.7°
C11C12C13H825.1°38.1°
C11C12C13H995.7°81.1°
C12C13C14H8119.6°120.4°
C12C13C14H9119.6°120.4°
C12C13C14C15170.7°156.5°
C12C13C14N260.2°45.6°
C12C13H8H9121.3°119.1°
C13C12C11H71.6°1.6°
C12C13C14H1063.3°78.3°
C13C14C15N2115.1°113.5°
C13C14C15H10126.3°125.2°
C13C14C15O262.1°63.7°
C13C14C15N1119.0°116.4°
C13C14N2C16125.3°119.6°
C13C14N2C658.9°59.9°
C14C13C12C734.9°22.5°
C13C14N2H10123.2°123.4°
C14C13H8H9121.3°119.2°
C14C15O2N1178.7°180.0°
C14C15N1C160.2°1.0°
C15C14N2C166.6°3.9°
C15C14N2C6177.6°175.6°
C15C14N2H10118.0°120.9°
C14C15N1H11179.7°178.9°
C15C14C13H869.7°83.1°
C15C14C13H951.1°36.1°
O2C15N1C16179.1°179.1°
O2C15C14N2177.2°177.1°
O2C15N1H110.8°1.1°
O2C15C14H1064.2°61.5°
C15N1C16H11180.0°179.8°
C15N1C16O3178.6°178.0°
C15N1C16N24.0°1.7°
N1C15C14N23.9°2.9°
N1C15C14H10114.7°118.5°
N1C16O3N2173.7°179.7°
N1C16N2C6177.7°175.8°
N1C16N2C146.8°3.6°
O3C16N2C63.0°4.4°
O3C16N2C14178.5°176.1°
O3C16N1H111.4°1.8°
C16N2C6C14175.2°179.4°
N2C16N1H11176.0°178.5°
C16N2C6H545.8°20.3°
C16N2C14H10111.5°117.0°
C10O4C17C1816.2°46.1°
O4C10C9O57.1°0.3°
C10O4C17H13105.0°73.6°
C10O4C17H12137.5°165.9°
O4C10C11H73.8°0.3°
O4C17C18H13121.2°119.7°
O4C17C18H12121.3°119.8°
O4C17C18O523.3°59.7°
O4C17H13H12116.1°120.6°
O4C17C18H15144.4°59.9°
O4C17C18H1497.9°179.4°
C17C18O5H15121.1°119.7°
C17C18O5H14121.2°119.7°
C17C18O5C915.3°46.2°
C18C17H13H12116.0°120.6°
C17C18H15H14116.5°120.7°
O5C18C17H1397.9°59.9°
O5C18C17H12144.5°179.5°
O5C18H15H14116.4°120.6°
C5C19C20H16180.0°179.9°
C5C19C20CL2179.4°180.0°
C5C19C20C21.0°0.6°
C19C5C6N292.2°127.5°
C19C5C4H4179.5°180.0°
C19C5C6H526.2°7.1°
C19C20CL2C2179.6°179.5°
CL2C20C19H160.6°0.0°
C2C20C19H16179.0°179.5°
N2C6C7C128.4°7.5°
C6N2C14H1064.3°63.5°
C12C7C6H5109.2°127.3°
C12C7C8H6177.3°179.5°
C7C12C13H8154.5°142.9°
C7C12C13H984.7°98.0°
C7C12C11H7178.8°179.3°
C14N2C6H5139.0°159.1°
N2C14C13H8179.8°166.0°
N2C14C13H959.4°74.8°
O5C9C8H62.1°0.2°
C9O5C18H15136.4°73.5°
C9O5C18H14105.8°165.9°
H8C13C14H1056.3°42.1°
H9C13C14H10177.2°161.3°
H13C17C18H1523.2°179.6°
H13C17C18H14140.9°59.8°
H12C17C18H1594.3°59.9°
H12C17C18H1423.4°60.8°
H2C1H1H3120.0°120.0°

250059

PDB entries from 2026-03-04

PDB statisticsPDBj update infoContact PDBjnumon