English 日本語简体中文繁體中文 한국어

✖

Menu

RCSB PDB PDBe BMRB Adv. Search Search help

Summary Geometry Related PDB entries

A1CXG

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O1	C1	doub	1.22Å	1.26Å
C1	O2	sing	1.35Å	1.26Å
C1	C2	sing	1.47Å	1.49Å
C2	C3	doub	1.36Å	1.38Å	Aromatic
C3	N1	sing	1.36Å	1.37Å	Aromatic
N1	C4	sing	1.36Å	1.35Å	Aromatic
C4	N2	doub	1.30Å	1.30Å	Aromatic
C2	N2	sing	1.36Å	1.35Å	Aromatic
N1	C5	sing	1.40Å	1.43Å
C5	C6	doub	1.39Å	1.38Å	Aromatic
C6	C7	sing	1.38Å	1.39Å	Aromatic
C7	C8	doub	1.38Å	1.38Å	Aromatic
C8	C9	sing	1.38Å	1.38Å	Aromatic
C9	C10	doub	1.38Å	1.39Å	Aromatic
C5	C10	sing	1.39Å	1.38Å	Aromatic
C10	H7	sing	1.08Å	1.08Å
C3	H1	sing	1.08Å	1.08Å
C4	H2	sing	1.08Å	1.08Å
C6	H3	sing	1.08Å	1.08Å
C7	H4	sing	1.08Å	1.08Å
C8	H5	sing	1.08Å	1.08Å
C9	H6	sing	1.08Å	1.08Å
O2	H8	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O1	C1	O2	125.0°	120.0°
O1	C1	C2	117.8°	120.0°
O2	C1	C2	117.2°	120.0°
C1	O2	H8	109.5°	117.0°
C1	C2	C3	130.6°	126.2°
C1	C2	N2	119.4°	126.2°
C2	C3	N1	105.3°	106.8°
C3	C2	N2	110.0°	107.6°
C2	C3	H1	127.3°	126.6°
C3	N1	C4	106.3°	107.6°
C3	N1	C5	127.3°	126.2°
N1	C3	H1	127.4°	126.6°
N1	C4	N2	112.4°	109.0°
C4	N1	C5	126.4°	126.2°
N1	C4	H2	123.8°	125.5°
C4	N2	C2	105.9°	109.0°
N2	C4	H2	123.8°	125.5°
N1	C5	C6	119.5°	120.1°
N1	C5	C10	119.9°	120.0°
C5	C6	C7	119.3°	120.0°
C6	C5	C10	120.6°	119.9°
C5	C6	H3	120.4°	120.1°
C6	C7	C8	120.6°	120.0°
C7	C6	H3	120.3°	120.0°
C6	C7	H4	119.7°	120.0°
C7	C8	C9	119.6°	120.1°
C8	C7	H4	119.7°	120.0°
C7	C8	H5	120.2°	119.9°
C8	C9	C10	120.7°	120.1°
C9	C8	H5	120.2°	120.0°
C8	C9	H6	119.6°	119.9°
C9	C10	C5	119.2°	119.9°
C9	C10	H7	120.4°	120.0°
C10	C9	H6	119.6°	120.0°
C5	C10	H7	120.4°	120.0°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O1	C1	O2	C2	179.8°	179.7°
O1	C1	C2	C3	10.3°	0.3°
O1	C1	C2	N2	169.8°	180.0°
O1	C1	O2	H8	0.0°	0.3°
O2	C1	C2	C3	169.9°	180.0°
O2	C1	C2	N2	10.0°	0.3°
C1	C2	C3	N2	179.9°	179.8°
C1	C2	C3	N1	179.6°	180.0°
C1	C2	N2	C4	179.8°	179.9°
C1	C2	C3	H1	0.4°	0.0°
C2	C1	O2	H8	179.8°	180.0°
C2	C3	N1	H1	180.0°	179.9°
C2	C3	N1	C4	0.4°	0.1°
C3	C2	N2	C4	0.3°	0.4°
C2	C3	N1	C5	179.8°	180.0°
C3	N1	C4	C5	179.4°	179.9°
C3	N1	C4	N2	0.3°	0.2°
N1	C3	C2	N2	0.5°	0.2°
C3	N1	C5	C6	128.8°	179.9°
C3	N1	C5	C10	52.9°	0.1°
C3	N1	C4	H2	179.7°	179.8°
N1	C4	N2	H2	180.0°	179.7°
N1	C4	N2	C2	0.0°	0.3°
C4	N1	C5	C6	51.9°	0.0°
C4	N1	C5	C10	126.4°	180.0°
C4	N1	C3	H1	179.5°	180.0°
N2	C4	N1	C5	179.7°	179.7°
N2	C2	C3	H1	179.5°	179.8°
C2	N2	C4	H2	180.0°	180.0°
N1	C5	C6	C10	178.3°	180.0°
N1	C5	C6	C7	179.5°	180.0°
N1	C5	C10	C9	179.0°	179.8°
N1	C5	C10	H7	1.0°	0.1°
C5	N1	C3	H1	0.2°	0.1°
C5	N1	C4	H2	0.3°	0.1°
N1	C5	C6	H3	0.5°	0.0°
C5	C6	C7	H3	180.0°	180.0°
C5	C6	C7	C8	1.0°	0.0°
C6	C5	C10	C9	0.7°	0.2°
C6	C5	C10	H7	179.3°	179.9°
C5	C6	C7	H4	179.0°	180.0°
C6	C7	C8	H4	180.0°	180.0°
C6	C7	C8	C9	0.3°	0.2°
C7	C6	C5	C10	1.2°	0.0°
C6	C7	C8	H5	179.7°	180.0°
C7	C8	C9	H5	180.0°	179.8°
C7	C8	C9	C10	0.2°	0.5°
C8	C7	C6	H3	179.0°	180.0°
C7	C8	C9	H6	179.8°	180.0°
C8	C9	C10	H6	180.0°	179.6°
C8	C9	C10	C5	0.0°	0.5°
C8	C9	C10	H7	180.0°	179.7°
C9	C8	C7	H4	179.7°	179.7°
C9	C10	C5	H7	180.0°	179.8°
C10	C9	C8	H5	179.8°	179.7°
C10	C5	C6	H3	178.8°	180.0°
C5	C10	C9	H6	180.0°	180.0°
H7	C10	C9	H6	0.0°	0.1°
H3	C6	C7	H4	1.0°	0.0°
H4	C7	C8	H5	0.3°	0.0°
H5	C8	C9	H6	0.2°	0.2°

250059

PDB entries from 2026-03-04

PDB statistics

PDBj update info

Contact PDBj

numon