English 日本語简体中文繁體中文 한국어

✖

Menu

RCSB PDB PDBe BMRB Adv. Search Search help

Summary Geometry Related PDB entries

A1CF8

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
F10	C07	sing	1.35Å	0.00Å
C08	C07	doub	1.39Å	0.00Å	Aromatic
C08	C09	sing	1.38Å	0.00Å	Aromatic
C07	C06	sing	1.39Å	0.00Å	Aromatic
O11	B01	sing	1.42Å	0.00Å
C09	C02	doub	1.39Å	0.00Å	Aromatic
C06	C03	doub	1.38Å	0.00Å	Aromatic
C02	C03	sing	1.40Å	0.00Å	Aromatic
C02	B01	sing	1.57Å	0.00Å
C03	C04	sing	1.51Å	0.00Å
B01	O05	sing	1.42Å	0.00Å
C04	O05	sing	1.43Å	0.00Å
C04	H1	sing	1.09Å	0.00Å
C04	H2	sing	1.09Å	0.00Å
C06	H3	sing	1.08Å	0.00Å
C08	H4	sing	1.08Å	0.00Å
C09	H5	sing	1.08Å	0.00Å
O11	H6	sing	0.97Å	0.00Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
F10	C07	C08	90.0°	119.8°
F10	C07	C06	90.0°	119.8°
C07	C08	C09	90.0°	120.0°
C08	C07	C06	90.0°	120.4°
C07	C08	H4	90.0°	120.0°
C08	C09	C02	90.0°	119.8°
C09	C08	H4	90.0°	120.0°
C08	C09	H5	90.0°	120.1°
C07	C06	C03	90.0°	120.0°
C07	C06	H3	90.0°	120.0°
O11	B01	C02	90.0°	126.4°
O11	B01	O05	90.0°	126.5°
B01	O11	H6	90.0°	113.9°
C09	C02	C03	90.0°	120.1°
C09	C02	B01	90.0°	133.0°
C02	C09	H5	90.0°	120.1°
C06	C03	C02	90.0°	119.8°
C06	C03	C04	90.0°	132.4°
C03	C06	H3	90.0°	120.0°
C03	C02	B01	90.0°	106.9°
C02	C03	C04	90.0°	107.9°
C02	B01	O05	90.0°	107.1°
C03	C04	O05	90.0°	109.4°
C03	C04	H1	90.0°	109.6°
C03	C04	H2	90.0°	109.5°
B01	O05	C04	90.0°	108.8°
O05	C04	H1	90.0°	109.5°
O05	C04	H2	90.0°	109.4°
H1	C04	H2	90.0°	109.4°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
F10	C07	C08	C06	90.0°	180.0°
F10	C07	C08	C09	90.0°	180.0°
F10	C07	C06	C03	90.0°	180.0°
F10	C07	C06	H3	90.0°	0.0°
F10	C07	C08	H4	90.0°	0.0°
C07	C08	C09	H4	90.0°	179.9°
C07	C08	C09	C02	90.0°	0.1°
C08	C07	C06	C03	90.0°	0.0°
C08	C07	C06	H3	90.0°	179.9°
C07	C08	C09	H5	90.0°	179.9°
C09	C08	C07	C06	90.0°	0.1°
C08	C09	C02	H5	90.0°	179.9°
C08	C09	C02	C03	90.0°	0.1°
C08	C09	C02	B01	90.0°	180.0°
C07	C06	C03	H3	90.0°	179.9°
C07	C06	C03	C02	90.0°	0.0°
C07	C06	C03	C04	90.0°	180.0°
C06	C07	C08	H4	90.0°	180.0°
O11	B01	C02	C09	90.0°	0.4°
O11	B01	C02	C03	90.0°	179.7°
O11	B01	C02	O05	90.0°	179.7°
O11	B01	O05	C04	90.0°	179.7°
C09	C02	C03	C06	90.0°	0.0°
C09	C02	C03	B01	90.0°	180.0°
C09	C02	C03	C04	90.0°	180.0°
C09	C02	B01	O05	90.0°	180.0°
C02	C09	C08	H4	90.0°	180.0°
C06	C03	C02	C04	90.0°	180.0°
C06	C03	C02	B01	90.0°	180.0°
C06	C03	C04	O05	90.0°	180.0°
C06	C03	C04	H1	90.0°	59.9°
C06	C03	C04	H2	90.0°	60.1°
C03	C02	B01	O05	90.0°	0.0°
C02	C03	C04	O05	90.0°	0.0°
C02	C03	C04	H1	90.0°	120.0°
C02	C03	C04	H2	90.0°	119.9°
C02	C03	C06	H3	90.0°	180.0°
C03	C02	C09	H5	90.0°	180.0°
B01	C02	C03	C04	90.0°	0.0°
C02	B01	O05	C04	90.0°	0.0°
B01	C02	C09	H5	90.0°	0.1°
C02	B01	O11	H6	90.0°	179.7°
C03	C04	O05	B01	90.0°	0.0°
C03	C04	O05	H1	90.0°	120.1°
C03	C04	O05	H2	90.0°	120.0°
C03	C04	H1	H2	90.0°	120.1°
C04	C03	C06	H3	90.0°	0.1°
B01	O05	C04	H1	90.0°	120.0°
B01	O05	C04	H2	90.0°	120.0°
O05	B01	O11	H6	90.0°	0.1°
O05	C04	H1	H2	90.0°	120.0°
H4	C08	C09	H5	90.0°	0.0°

248942

PDB entries from 2026-02-11

PDB statistics

PDBj update info

Contact PDBj

numon