Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

A1CDU

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C9C8doub1.38Å1.39ÅAromatic
C9C10sing1.38Å1.38ÅAromatic
C8C7sing1.38Å1.39ÅAromatic
O3C2doub1.21Å1.24Å
C4O5sing1.43Å1.43Å
C4C2sing1.51Å1.53Å
C4C6sing1.53Å1.53Å
C10C11doub1.38Å1.38ÅAromatic
C7C6sing1.51Å1.51Å
C7C12doub1.38Å1.39ÅAromatic
C2N1sing1.35Å1.33Å
C11C12sing1.38Å1.39ÅAromatic
N1H1Bsing0.97Å1.00Å
N1H1Asing0.97Å1.00Å
C4H4sing1.09Å1.10Å
C6H6Asing1.09Å1.10Å
C6H6Bsing1.09Å1.10Å
C8H8sing1.08Å1.08Å
C10H10sing1.08Å1.08Å
C11H11sing1.08Å1.08Å
C12H12sing1.08Å1.08Å
C9H9sing1.08Å1.08Å
O5H5sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C8C9C10120.3°120.0°
C9C8C7120.9°120.0°
C9C8H8119.6°120.0°
C8C9H9119.9°120.0°
C9C10C11119.6°120.0°
C9C10H10120.2°120.0°
C10C9H9119.9°120.0°
C8C7C6120.7°120.0°
C8C7C12118.2°120.0°
C7C8H8119.6°120.0°
O3C2C4119.1°120.0°
O3C2N1123.6°120.0°
O5C4C2111.0°109.5°
O5C4C6109.9°109.5°
O5C4H4109.5°109.5°
C4O5H5109.5°114.1°
C2C4C6110.0°109.5°
C4C2N1117.3°120.0°
C2C4H4108.1°109.5°
C4C6C7114.9°109.5°
C6C4H4108.2°109.4°
C4C6H6A108.1°109.5°
C4C6H6B108.1°109.5°
C10C11C12120.3°120.0°
C11C10H10120.2°120.0°
C10C11H11119.9°120.0°
C6C7C12120.8°120.0°
C7C6H6A108.1°109.4°
C7C6H6B108.1°109.5°
C7C12C11120.8°120.0°
C7C12H12119.6°120.0°
C2N1H1B120.0°120.0°
C2N1H1A120.0°120.0°
C12C11H11119.8°120.0°
C11C12H12119.6°120.0°
H1BN1H1A120.0°120.0°
H6AC6H6B109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C8C9C10H9180.0°180.0°
C9C8C7H8180.0°179.9°
C8C9C10C110.0°0.3°
C9C8C7C6173.3°180.0°
C9C8C7C120.2°0.3°
C8C9C10H10180.0°179.9°
C10C9C8C70.2°0.0°
C9C10C11H10180.0°179.6°
C9C10C11C120.0°0.3°
C10C9C8H8179.8°180.0°
C9C10C11H11180.0°179.7°
C8C7C6C495.6°89.7°
C8C7C6C12173.4°179.7°
C8C7C12C110.2°0.3°
C8C7C6H6A143.6°150.3°
C8C7C6H6B25.2°30.4°
C8C7C12H12179.8°179.7°
C7C8C9H9179.8°179.9°
O3C2C4O573.4°4.9°
O3C2C4N1180.0°179.9°
O3C2C4C6164.7°115.1°
O3C2N1H1B0.0°180.0°
O3C2N1H1A180.0°0.4°
O3C2C4H446.8°125.0°
O5C4C2C6121.9°120.0°
O5C4C2H4120.2°120.1°
O5C4C6H4119.5°120.0°
O5C4C6C751.6°65.0°
O5C4C2N1106.6°175.0°
O5C4C6H6A69.3°54.9°
O5C4C6H6B172.3°175.0°
C2C4C6H4117.9°119.9°
C2C4C6C7174.1°175.0°
C4C2N1H1B180.0°0.0°
C4C2N1H1A0.0°179.7°
C2C4C6H6A53.3°65.1°
C2C4C6H6B65.1°55.0°
C2C4O5H5180.0°60.0°
C4C6C7H6A120.8°120.0°
C4C6C7H6B120.8°120.1°
C4C6C7C1291.0°89.9°
C6C4C2N115.2°65.0°
C4C6H6AH6B117.5°120.1°
C6C4O5H558.1°60.0°
C10C11C12C70.1°0.0°
C10C11C12H11180.0°179.9°
C10C11C12H12179.9°180.0°
C11C10C9H9179.9°179.7°
C6C7C12C11173.4°180.0°
C7C6C4H468.0°55.1°
C7C6H6AH6B117.5°119.9°
C6C7C8H86.7°0.1°
C6C7C12H126.6°0.0°
C7C12C11H12180.0°180.0°
C12C7C6H6A29.8°30.0°
C12C7C6H6B148.2°150.0°
C12C7C8H8179.8°179.7°
C7C12C11H11179.9°180.0°
C2N1H1BH1A180.0°179.7°
N1C2C4H4133.2°54.9°
C12C11C10H10180.0°180.0°
H4C4C6H6A171.2°175.0°
H4C4C6H6B52.8°65.0°
H4C4O5H560.6°179.9°
H8C8C9H90.2°0.0°
H10C10C11H110.0°0.1°
H10C10C9H90.0°0.1°
H11C11C12H120.1°0.0°

247947

PDB entries from 2026-01-21

PDB statisticsPDBj update infoContact PDBjnumon