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Summary Geometry Related PDB entries

A1CC7

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C02	C01	doub	1.31Å	1.32Å
P03	C02	sing	1.81Å	1.86Å
O04	P03	sing	1.61Å	1.51Å
O05	P03	sing	1.61Å	1.51Å
O06	P03	doub	1.48Å	1.51Å
C01	H012	sing	1.08Å	1.08Å
C01	H011	sing	1.08Å	1.08Å
C02	H021	sing	1.08Å	1.08Å
O04	H1	sing	0.97Å	0.95Å
O05	H2	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
C01	C02	P03	120.0°	120.0°
C02	C01	H012	120.0°	120.0°
C02	C01	H011	120.0°	120.0°
C01	C02	H021	120.0°	120.0°
C02	P03	O04	109.3°	109.5°
C02	P03	O05	110.2°	109.5°
C02	P03	O06	109.3°	109.5°
P03	C02	H021	120.0°	120.0°
O04	P03	O05	108.8°	109.5°
O04	P03	O06	109.2°	109.4°
P03	O04	H1	109.5°	114.0°
O05	P03	O06	110.0°	109.5°
P03	O05	H2	109.5°	114.0°
H012	C01	H011	120.0°	120.0°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
C01	C02	P03	H021	180.0°	180.0°
C01	C02	P03	O04	82.6°	0.0°
C01	C02	P03	O05	157.9°	120.0°
C01	C02	P03	O06	36.9°	120.0°
C02	C01	H012	H011	180.0°	179.7°
C02	P03	O04	O05	120.4°	120.0°
C02	P03	O04	O06	119.5°	120.0°
C02	P03	O05	O06	120.6°	120.0°
P03	C02	C01	H012	0.0°	0.1°
P03	C02	C01	H011	180.0°	179.7°
C02	P03	O04	H1	119.5°	60.0°
C02	P03	O05	H2	120.6°	180.0°
O04	P03	O05	O06	119.6°	119.9°
O04	P03	C02	H021	97.4°	180.0°
O04	P03	O05	H2	119.6°	60.0°
O05	P03	C02	H021	22.1°	60.0°
O05	P03	O04	H1	120.1°	60.0°
O06	P03	C02	H021	143.1°	60.0°
O06	P03	O04	H1	0.0°	180.0°
O06	P03	O05	H2	0.0°	59.9°
H012	C01	C02	H021	180.0°	179.9°
H011	C01	C02	H021	0.0°	0.3°

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PDB entries from 2026-05-20

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