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SummaryGeometryRelated PDB entries

A1BZD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
F3C2sing1.40Å1.38Å
C2F4sing1.40Å1.37Å
C2C5sing1.51Å1.51Å
C2F1sing1.40Å1.38Å
C5C6sing1.40Å1.39ÅAromatic
C5C26doub1.35Å1.35ÅAromatic
C6C7doub1.39Å1.39ÅAromatic
C26N25sing1.36Å1.36ÅAromatic
O18C17doub1.22Å1.21Å
O12C8sing1.35Å1.34ÅAromatic
O12C11sing1.34Å1.33ÅAromatic
C7C8sing1.48Å1.47Å
C7C13sing1.42Å1.43ÅAromatic
N25C13sing1.36Å1.37ÅAromatic
N25C16sing1.38Å1.38ÅAromatic
C8C9doub1.36Å1.35ÅAromatic
C11N10doub1.30Å1.30ÅAromatic
C13N14doub1.33Å1.33ÅAromatic
C17C16sing1.42Å1.44Å
C17N19sing1.35Å1.35Å
C16C15doub1.38Å1.39ÅAromatic
C9N10sing1.34Å1.35ÅAromatic
C24N19sing1.47Å1.49Å
C24C23sing1.53Å1.54Å
N14C15sing1.32Å1.33ÅAromatic
N19C20sing1.47Å1.47Å
C20C21sing1.53Å1.54Å
C23O22sing1.43Å1.44Å
O22C21sing1.43Å1.45Å
C6H1sing1.08Å1.08Å
C15H2sing1.08Å1.08Å
C20H3sing1.09Å1.10Å
C20H4sing1.09Å1.10Å
C21H5sing1.09Å1.10Å
C21H6sing1.09Å1.10Å
C24H7sing1.09Å1.10Å
C24H8sing1.09Å1.10Å
C26H9sing1.08Å1.08Å
C9H10sing1.08Å1.08Å
C11H11sing1.08Å1.08Å
C23H12sing1.09Å1.10Å
C23H13sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
F3C2F4108.6°109.5°
F3C2C5110.8°109.4°
F3C2F1109.9°109.5°
F4C2C5111.8°109.5°
F4C2F1105.6°109.5°
C5C2F1110.0°109.5°
C2C5C6120.0°119.8°
C2C5C26120.2°119.9°
C6C5C26119.8°120.2°
C5C6C7120.4°119.3°
C5C6H1119.8°120.3°
C5C26N25121.3°121.2°
C5C26H9119.3°119.4°
C6C7C8118.0°120.5°
C6C7C13118.3°119.0°
C7C6H1119.8°120.3°
C26N25C13121.1°120.8°
C26N25C16130.3°132.3°
N25C26H9119.3°119.4°
O18C17C16119.1°120.0°
O18C17N19117.0°120.0°
C8O12C11109.5°107.7°
O12C8C7124.8°126.6°
O12C8C9105.7°106.8°
O12C11N10108.0°109.0°
O12C11H11126.0°125.5°
C8C7C13123.7°120.5°
C7C8C9129.5°126.6°
C7C13N25119.0°119.4°
C7C13N14132.8°131.8°
C13N25C16108.4°106.9°
N25C13N14108.1°108.7°
N25C16C17126.6°126.8°
N25C16C15104.5°106.4°
C8C9N10108.1°107.5°
C8C9H10126.0°126.2°
C11N10C9108.8°109.0°
N10C11H11126.0°125.5°
C13N14C15108.9°109.8°
C16C17N19124.0°120.0°
C17C16C15128.9°126.8°
C17N19C24122.7°121.0°
C17N19C20120.5°120.9°
C16C15N14109.9°108.2°
C16C15H2125.0°125.9°
N10C9H10126.0°126.3°
N19C24C23111.9°108.4°
C24N19C20116.3°118.1°
N19C24H7108.9°109.7°
N19C24H8108.9°109.7°
C24C23O22110.9°109.2°
C23C24H7108.9°109.7°
C23C24H8108.8°109.7°
C24C23H12109.1°109.5°
C24C23H13109.1°109.5°
N14C15H2125.1°125.9°
N19C20C21100.6°108.4°
N19C20H3111.6°109.6°
N19C20H4111.6°109.7°
C20C21O22107.1°109.3°
C21C20H3111.6°109.7°
C21C20H4111.6°109.7°
C20C21H5110.1°109.5°
C20C21H6110.1°109.5°
C23O22C21117.2°114.2°
O22C23H12109.1°109.5°
O22C23H13109.1°109.5°
O22C21H5110.0°109.5°
O22C21H6110.0°109.6°
H3C20H4109.5°109.7°
H5C21H6109.5°109.5°
H7C24H8109.5°109.7°
H12C23H13109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
F3C2F4C5122.5°120.0°
F3C2F4F1117.9°120.0°
F3C2C5F1121.7°120.0°
F3C2C5C675.3°155.0°
F3C2C5C26102.9°25.3°
F4C2C5F1117.0°120.0°
F4C2C5C6163.4°85.0°
F4C2C5C2618.4°94.7°
C2C5C6C26178.3°179.8°
C2C5C6C7179.8°179.7°
C2C5C26N25179.1°179.8°
C2C5C6H10.2°0.3°
C2C5C26H90.8°0.3°
F1C2C5C646.4°35.0°
F1C2C5C26135.3°145.3°
C5C6C7H1180.0°180.0°
C6C5C26N250.9°0.0°
C5C6C7C8180.0°179.9°
C5C6C7C130.1°0.0°
C6C5C26H9179.1°180.0°
C26C5C6C71.6°0.0°
C5C26N25H9180.0°179.9°
C5C26N25C131.3°0.1°
C5C26N25C16176.2°180.0°
C26C5C6H1178.5°180.0°
C6C7C8O122.8°115.4°
C6C7C8C13179.9°179.9°
C6C7C13N251.9°0.1°
C6C7C8C9174.7°65.0°
C6C7C13N14179.4°180.0°
C26N25C13C72.7°0.1°
C26N25C13C16175.9°179.9°
C26N25C13N14178.4°180.0°
C26N25C16C175.6°0.1°
C26N25C16C15175.1°180.0°
O18C17C16N256.5°28.0°
O18C17C16N19178.2°179.9°
O18C17C16C15172.6°152.1°
O18C17N19C241.8°0.9°
O18C17N19C20173.7°179.1°
O12C8C7C9177.5°179.6°
O12C8C7C13177.3°64.7°
C8O12C11N101.7°0.5°
O12C8C9N100.7°0.3°
O12C8C9H10179.3°179.7°
C8O12C11H11178.3°179.8°
C11O12C8C7179.4°179.8°
C11O12C8C91.5°0.5°
O12C11N10H11180.0°179.7°
O12C11N10C91.3°0.3°
C8C7C13N25178.0°180.0°
C8C7C13N140.7°0.1°
C7C8C9N10178.5°180.0°
C8C7C6H10.0°0.1°
C7C8C9H101.5°0.0°
C7C13N25N14179.0°179.9°
C7C13N25C16178.6°180.0°
C13C7C8C95.2°114.9°
C7C13N14C15176.8°179.9°
C13C7C6H1179.9°180.0°
C13N25C16C17179.0°180.0°
C13N25C16C150.3°0.1°
N25C13N14C154.4°0.0°
C13N25C26H9178.8°180.0°
C16N25C13N142.5°0.1°
N25C16C17C15179.1°179.9°
N25C16C17N19175.3°152.1°
N25C16C15N143.0°0.1°
N25C16C15H2177.0°180.0°
C16N25C26H93.9°0.1°
C8C9N10C110.4°0.0°
C8C9N10H10180.0°180.0°
C11N10C9H10179.6°180.0°
C13N14C15C164.7°0.0°
C13N14C15H2175.3°180.0°
C16C17N19C24180.0°179.0°
C17C16C15N14176.3°180.0°
C16C17N19C208.1°1.0°
C17C16C15H23.7°0.0°
N19C17C16C155.6°27.8°
C17N19C24C20172.2°180.0°
C17N19C24C23122.4°129.4°
C17N19C20C21107.5°129.5°
C17N19C20H3134.0°110.8°
C17N19C20H411.1°9.7°
C17N19C24H72.0°110.8°
C17N19C24H8117.3°9.7°
C16C15N14H2180.0°180.0°
C9N10C11H11178.7°180.0°
N19C24C23H7120.4°119.7°
N19C24C23H8120.4°119.7°
C24N19C20C2164.9°50.5°
N19C24C23O2234.1°52.3°
C24N19C20H353.6°69.2°
C24N19C20H4176.5°170.3°
N19C24H7H8118.9°120.5°
N19C24C23H1286.1°172.2°
N19C24C23H13154.4°67.6°
C23C24N19C2049.8°50.5°
C24C23O22H12120.2°119.9°
C24C23O22H13120.2°120.0°
C24C23O22C2145.0°62.6°
C23C24H7H8118.8°120.6°
C24C23H12H13119.3°120.1°
N19C20C21H3118.6°119.7°
N19C20C21H4118.6°119.8°
N19C20C21O2268.0°52.3°
N19C20H3H4124.1°120.6°
N19C20C21H5172.4°67.7°
N19C20C21H651.6°172.3°
C20N19C24H7170.2°69.2°
C20N19C24H870.5°170.3°
C20C21O22C2364.5°62.6°
C20C21O22H5119.6°120.0°
C20C21O22H6119.7°120.0°
C21C20H3H4124.1°120.6°
C20C21H5H6121.2°120.1°
C23O22C21H5175.9°57.4°
C23O22C21H655.1°177.4°
O22C23C24H7154.5°67.4°
O22C23C24H886.2°172.0°
O22C23H12H13119.3°120.1°
O22C21C20H350.5°67.4°
O22C21C20H4173.4°172.1°
O22C21H5H6121.1°120.1°
C21O22C23H1275.2°177.5°
C21O22C23H13165.3°57.3°
H3C20C21H569.1°172.7°
H3C20C21H6170.1°52.6°
H4C20C21H553.8°52.1°
H4C20C21H667.0°67.9°
H7C24C23H1234.3°52.5°
H7C24C23H1385.2°172.7°
H8C24C23H12153.6°68.1°
H8C24C23H1334.0°52.1°

238895

PDB entries from 2025-07-16

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