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SummaryGeometryRelated PDB entries

A1BUD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C11C04sing1.51Å1.51Å
C04C03doub1.36Å1.38ÅAromatic
C04C05sing1.41Å1.39ÅAromatic
C03C02sing1.40Å1.40ÅAromatic
C06C05doub1.40Å1.39ÅAromatic
C06C07sing1.36Å1.39ÅAromatic
C05C10sing1.42Å1.39ÅAromatic
F12C07sing1.35Å1.35Å
C02N02sing1.39Å1.36Å
C02N01doub1.32Å1.35ÅAromatic
C07C08doub1.41Å1.39ÅAromatic
C10N01sing1.34Å1.35ÅAromatic
C10C09doub1.40Å1.40ÅAromatic
C08C09sing1.38Å1.40ÅAromatic
C08C21sing1.48Å1.49Å
C21C26doub1.39Å1.39ÅAromatic
C21C22sing1.39Å1.40ÅAromatic
C26C25sing1.38Å1.39ÅAromatic
N28C27sing1.47Å1.47Å
C22C23doub1.38Å1.39ÅAromatic
C25C27sing1.51Å1.51Å
C25C24doub1.38Å1.39ÅAromatic
C23C24sing1.38Å1.39ÅAromatic
C11H1sing1.09Å1.10Å
C11H2sing1.09Å1.10Å
C11H3sing1.09Å1.10Å
C03H4sing1.08Å1.08Å
C06H5sing1.08Å1.08Å
C09H6sing1.08Å1.08Å
C22H7sing1.08Å1.08Å
C23H8sing1.08Å1.08Å
C24H9sing1.08Å1.08Å
C26H10sing1.08Å1.08Å
C27H11sing1.09Å1.10Å
C27H12sing1.09Å1.10Å
N02H13sing0.97Å1.00Å
N02H14sing0.97Å1.00Å
N28H15sing1.01Å1.00Å
N28H16sing1.01Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C11C04C03120.1°120.8°
C11C04C05120.3°120.8°
C04C11H1109.5°109.5°
C04C11H2109.5°109.5°
C04C11H3109.4°109.5°
C03C04C05119.6°118.4°
C04C03C02119.1°119.9°
C04C03H4120.5°120.1°
C04C05C06119.8°121.0°
C04C05C10120.1°119.1°
C03C02N02119.9°119.2°
C03C02N01120.0°121.5°
C02C03H4120.5°120.0°
C05C06C07119.9°120.0°
C06C05C10120.1°119.9°
C05C06H5120.1°120.0°
C06C07F12120.1°119.7°
C06C07C08120.7°120.7°
C07C06H5120.1°120.0°
C05C10N01119.2°119.9°
C05C10C09119.9°119.3°
F12C07C08119.2°119.6°
N02C02N01120.1°119.3°
C02N02H13109.5°120.0°
C02N02H14109.5°120.0°
C02N01C10122.0°121.3°
C07C08C09119.4°120.6°
C07C08C21117.7°119.7°
N01C10C09121.0°120.8°
C10C09C08120.0°119.6°
C10C09H6120.0°120.2°
C09C08C21122.7°119.7°
C08C09H6120.0°120.2°
C08C21C26115.3°120.1°
C08C21C22125.4°120.1°
C26C21C22119.2°119.8°
C21C26C25120.7°119.9°
C21C26H10119.7°120.0°
C21C22C23120.1°119.8°
C21C22H7119.9°120.1°
C26C25C27119.4°119.9°
C26C25C24119.9°120.1°
C25C26H10119.6°120.1°
N28C27C25107.4°109.5°
N28C27H11110.0°109.5°
N28C27H12110.0°109.4°
C27N28H15109.5°111.0°
C27N28H16109.5°111.1°
C22C23C24120.0°120.2°
C23C22H7119.9°120.1°
C22C23H8120.0°119.9°
C27C25C24120.7°119.9°
C25C27H11110.0°109.5°
C25C27H12110.0°109.5°
C25C24C23120.0°120.2°
C25C24H9120.0°119.9°
C24C23H8120.0°119.9°
C23C24H9120.0°119.9°
H1C11H2109.5°109.4°
H1C11H3109.5°109.5°
H2C11H3109.5°109.4°
H11C27H12109.5°109.4°
H13N02H14109.4°120.1°
H15N28H16109.5°111.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C11C04C03C05179.5°180.0°
C11C04C03C02179.7°180.0°
C11C04C05C060.9°0.0°
C11C04C05C10179.3°180.0°
C04C11H1H2120.0°120.0°
C04C11H1H3120.0°120.0°
C04C11H2H3120.0°120.0°
C11C04C03H40.3°0.1°
C04C03C02H4180.0°179.9°
C03C04C05C06179.6°179.9°
C03C04C05C100.2°0.0°
C04C03C02N02179.7°180.0°
C04C03C02N010.8°0.3°
C03C04C11H189.7°90.0°
C03C04C11H2150.3°150.0°
C03C04C11H330.3°30.0°
C05C04C03C020.3°0.0°
C04C05C06C10179.8°179.9°
C04C05C06C07179.6°179.9°
C04C05C10N010.1°0.2°
C04C05C10C09179.9°180.0°
C05C04C11H189.7°90.0°
C05C04C11H230.3°30.0°
C05C04C11H3150.3°150.0°
C05C04C03H4179.7°179.9°
C04C05C06H50.5°0.0°
C03C02N02N01179.5°179.7°
C03C02N01C101.0°0.5°
C03C02N02H13179.5°179.8°
C03C02N02H1459.5°0.3°
C05C06C07H5180.0°179.9°
C05C06C07F12179.8°179.9°
C05C06C07C080.0°0.1°
C06C05C10N01179.7°179.8°
C06C05C10C090.3°0.1°
C07C06C05C100.2°0.0°
C06C07F12C08179.8°179.9°
C06C07C08C090.8°0.0°
C06C07C08C21176.9°180.0°
C05C10N01C020.5°0.4°
C05C10N01C09180.0°179.9°
C05C10C09C081.1°0.1°
C10C05C06H5179.7°179.9°
C05C10C09H6178.9°179.9°
F12C07C08C09179.0°179.9°
F12C07C08C212.9°0.1°
F12C07C06H50.2°0.1°
N02C02N01C10179.5°179.8°
N02C02C03H40.3°0.1°
C02N02H13H14120.0°179.9°
C02N01C10C09179.5°179.7°
N01C02C03H4179.2°179.8°
N01C02N02H130.0°0.0°
N01C02N02H14120.0°180.0°
C07C08C09C101.3°0.1°
C07C08C09C21175.9°180.0°
C07C08C21C26119.7°50.0°
C07C08C21C2256.3°130.3°
C08C07C06H5180.0°180.0°
C07C08C09H6178.7°180.0°
N01C10C09C08178.9°179.7°
N01C10C09H61.1°0.2°
C10C09C08H6180.0°179.9°
C10C09C08C21177.2°179.9°
C09C08C21C2656.3°130.0°
C09C08C21C22127.7°49.8°
C08C21C26C22176.3°179.7°
C08C21C26C25178.3°179.7°
C08C21C22C23177.8°180.0°
C21C08C09H62.8°0.0°
C08C21C22H72.3°0.0°
C08C21C26H101.7°0.0°
C21C26C25H10180.0°179.7°
C26C21C22C231.9°0.3°
C21C26C25C27179.1°179.7°
C21C26C25C241.2°0.6°
C26C21C22H7178.1°179.7°
C22C21C26C252.0°0.6°
C21C22C23H7180.0°180.0°
C21C22C23C240.9°0.0°
C21C22C23H8179.1°180.0°
C22C21C26H10178.0°179.7°
C26C25C27N28110.2°89.8°
C26C25C27C24179.7°179.7°
C26C25C24C230.2°0.3°
C26C25C24H9179.8°179.7°
C26C25C27H11130.2°30.3°
C26C25C27H129.5°150.3°
N28C27C25H11119.6°120.1°
N28C27C25H12119.6°119.9°
N28C27C25C2469.5°90.0°
N28C27H11H12121.0°119.9°
C27N28H15H16120.0°124.0°
C22C23C24C250.0°0.0°
C22C23C24H8180.0°180.0°
C22C23C24H9180.0°180.0°
C27C25C24C23179.9°180.0°
C27C25C24H90.1°0.0°
C27C25C26H100.9°0.0°
C25C27H11H12121.0°120.0°
C25C27N28H15180.0°180.0°
C25C27N28H1660.0°56.0°
C25C24C23H9180.0°180.0°
C25C24C23H8179.9°180.0°
C24C25C26H10178.8°179.7°
C24C25C27H1150.1°150.0°
C24C25C27H12170.8°30.0°
C24C23C22H7179.1°180.0°
H1C11H2H3120.0°119.9°
H7C22C23H80.9°0.0°
H8C23C24H90.1°0.0°
H11C27N28H1560.4°59.9°
H11C27N28H1659.7°176.1°
H12C27N28H1560.3°60.0°
H12C27N28H16179.6°64.0°

250359

PDB entries from 2026-03-11

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