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SummaryGeometryRelated PDB entries

A1BDW

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
O01C02sing1.43Å1.40Å
C02C03sing1.51Å1.52Å
C04C03doub1.38Å1.38ÅAromatic
C04C05sing1.38Å1.38ÅAromatic
C03C10sing1.38Å1.39ÅAromatic
C05C06doub1.38Å1.38ÅAromatic
C10C09doub1.38Å1.39ÅAromatic
C06C09sing1.38Å1.39ÅAromatic
C06C07sing1.51Å1.52Å
C07O08sing1.43Å1.40Å
C10H1sing1.08Å1.08Å
C02H2sing1.09Å1.10Å
C02H3sing1.09Å1.10Å
C04H4sing1.08Å1.08Å
C05H5sing1.08Å1.08Å
C07H6sing1.09Å1.10Å
C07H7sing1.09Å1.10Å
C09H8sing1.08Å1.08Å
O01H9sing0.97Å0.95Å
O08H10sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
O01C02C03110.2°109.5°
O01C02H2109.3°109.4°
O01C02H3109.3°109.4°
C02O01H9109.5°114.1°
C02C03C04117.5°120.0°
C02C03C10121.9°120.0°
C03C02H2109.3°109.5°
C03C02H3109.3°109.5°
C03C04C05120.2°120.0°
C04C03C10120.6°120.0°
C03C04H4119.9°120.0°
C04C05C06119.7°120.0°
C05C04H4119.9°120.0°
C04C05H5120.2°120.0°
C03C10C09119.0°120.0°
C03C10H1120.5°120.0°
C05C06C09120.3°120.0°
C05C06C07118.3°120.0°
C06C05H5120.1°120.0°
C10C09C06120.2°120.0°
C09C10H1120.5°120.0°
C10C09H8119.9°120.0°
C09C06C07121.4°120.0°
C06C09H8119.9°120.0°
C06C07O08107.1°109.5°
C06C07H6110.1°109.5°
C06C07H7110.1°109.5°
O08C07H6110.0°109.5°
O08C07H7110.1°109.4°
C07O08H10109.5°114.0°
H2C02H3109.5°109.4°
H6C07H7109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
O01C02C03H2120.1°120.0°
O01C02C03H3120.1°120.0°
O01C02C03C04160.2°90.0°
O01C02C03C1020.5°90.0°
O01C02H2H3119.7°119.9°
C02C03C04C10179.3°180.0°
C02C03C04C05180.0°180.0°
C02C03C10C09179.8°180.0°
C02C03C10H10.2°0.3°
C03C02H2H3119.7°120.0°
C02C03C04H40.0°0.0°
C03C02O01H9180.0°180.0°
C03C04C05H4180.0°180.0°
C03C04C05C060.5°0.0°
C04C03C10C090.9°0.0°
C04C03C10H1179.1°179.6°
C04C03C02H279.7°30.1°
C04C03C02H340.1°150.0°
C03C04C05H5179.5°179.9°
C05C04C03C100.7°0.0°
C04C05C06H5180.0°179.9°
C04C05C06C090.5°0.0°
C04C05C06C07179.8°180.0°
C03C10C09H1180.0°179.7°
C03C10C09C060.9°0.0°
C10C03C02H299.6°150.0°
C10C03C02H3140.6°30.0°
C10C03C04H4179.3°180.0°
C03C10C09H8179.1°179.7°
C05C06C09C100.7°0.0°
C05C06C09C07179.7°179.9°
C05C06C07O0830.2°90.0°
C06C05C04H4179.5°180.0°
C05C06C07H689.4°150.0°
C05C06C07H7149.9°30.0°
C05C06C09H8179.3°179.7°
C10C09C06H8180.0°179.6°
C10C09C06C07179.6°180.0°
C09C06C07O08150.1°90.1°
C06C09C10H1179.1°179.6°
C09C06C05H5179.5°179.9°
C09C06C07H690.3°29.9°
C09C06C07H730.4°149.9°
C06C07O08H6119.6°120.0°
C06C07O08H7119.6°120.0°
C07C06C05H50.3°0.0°
C06C07H6H7121.1°120.1°
C07C06C09H80.4°0.4°
C06C07O08H10180.0°180.0°
O08C07H6H7121.1°120.0°
H1C10C09H80.9°0.0°
H2C02O01H959.9°60.0°
H3C02O01H959.9°60.0°
H4C04C05H50.5°0.1°
H6C07O08H1060.4°60.0°
H7C07O08H1060.4°60.0°

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PDB entries from 2026-01-21

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