A1BBC
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O3' | C3' | sing | 1.43Å | 1.44Å | |
| O4' | C4' | sing | 1.44Å | 1.48Å | |
| O4' | C1' | sing | 1.44Å | 1.43Å | |
| C4' | C3' | sing | 1.54Å | 1.49Å | |
| C4' | C5' | sing | 1.53Å | 1.50Å | |
| C1' | C2' | sing | 1.54Å | 1.50Å | |
| C1' | N1 | sing | 1.47Å | 1.39Å | |
| O5' | C5' | sing | 1.43Å | 1.42Å | |
| O5' | P | sing | 1.61Å | 1.63Å | |
| C3' | C2' | sing | 1.55Å | 1.47Å | |
| OP1 | P | doub | 1.48Å | 1.48Å | |
| C2' | F01 | sing | 1.40Å | 1.41Å | |
| N1 | C6 | sing | 1.37Å | 1.50Å | |
| N1 | C2 | sing | 1.35Å | 1.59Å | |
| P | OP2 | sing | 1.61Å | 1.51Å | |
| P | OP3 | sing | 1.61Å | 1.51Å | |
| O2 | C2 | doub | 1.22Å | 1.19Å | |
| C6 | C5 | doub | 1.35Å | 1.16Å | |
| C2 | N3 | sing | 1.35Å | 1.48Å | |
| O07 | C7 | sing | 1.43Å | 1.40Å | |
| C5 | C7 | sing | 1.51Å | 1.54Å | |
| C5 | C4 | sing | 1.42Å | 1.49Å | |
| N3 | C4 | sing | 1.35Å | 1.20Å | |
| C4 | O4 | doub | 1.22Å | 1.21Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| C4' | H4' | sing | 1.09Å | 1.10Å | |
| C5' | H5' | sing | 1.09Å | 1.10Å | |
| C5' | H5'' | sing | 1.09Å | 1.10Å | |
| C1' | H1' | sing | 1.09Å | 1.10Å | |
| C7 | H71 | sing | 1.09Å | 1.10Å | |
| C7 | H72 | sing | 1.09Å | 1.10Å | |
| C6 | H6 | sing | 1.08Å | 1.08Å | |
| C2' | H2' | sing | 1.09Å | 1.10Å | |
| N3 | H3 | sing | 0.97Å | 1.00Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| OP3 | HOP3 | sing | 0.97Å | 0.95Å | |
| OP2 | HOP2 | sing | 0.97Å | 0.95Å | |
| O07 | HO7 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O3' | C3' | C4' | 113.8° | 110.6° |
| O3' | C3' | C2' | 113.0° | 110.5° |
| O3' | C3' | H3' | 108.8° | 110.5° |
| C3' | O3' | HO3' | 109.5° | 114.0° |
| C4' | O4' | C1' | 111.4° | 105.2° |
| O4' | C4' | C3' | 107.3° | 104.8° |
| O4' | C4' | C5' | 110.6° | 110.4° |
| O4' | C4' | H4' | 108.9° | 110.4° |
| O4' | C1' | C2' | 103.8° | 104.8° |
| O4' | C1' | N1 | 106.8° | 110.3° |
| O4' | C1' | H1' | 111.4° | 110.5° |
| C3' | C4' | C5' | 112.6° | 110.4° |
| C4' | C3' | C2' | 104.6° | 104.1° |
| C4' | C3' | H3' | 108.1° | 110.5° |
| C3' | C4' | H4' | 108.7° | 110.4° |
| C4' | C5' | O5' | 109.8° | 109.5° |
| C5' | C4' | H4' | 108.6° | 110.3° |
| C4' | C5' | H5' | 109.4° | 109.5° |
| C4' | C5' | H5'' | 109.4° | 109.4° |
| C2' | C1' | N1 | 112.1° | 110.4° |
| C1' | C2' | C3' | 111.8° | 104.1° |
| C1' | C2' | F01 | 109.3° | 110.5° |
| C2' | C1' | H1' | 110.4° | 110.4° |
| C1' | C2' | H2' | 109.4° | 110.5° |
| C1' | N1 | C6 | 131.7° | 119.7° |
| C1' | N1 | C2 | 117.1° | 119.7° |
| N1 | C1' | H1' | 112.1° | 110.3° |
| C5' | O5' | P | 118.6° | 123.0° |
| O5' | C5' | H5' | 109.4° | 109.5° |
| O5' | C5' | H5'' | 109.4° | 109.5° |
| O5' | P | OP1 | 102.3° | 109.5° |
| O5' | P | OP2 | 107.3° | 109.5° |
| O5' | P | OP3 | 107.4° | 109.5° |
| C3' | C2' | F01 | 105.8° | 110.5° |
| C2' | C3' | H3' | 108.3° | 110.6° |
| C3' | C2' | H2' | 109.8° | 110.5° |
| OP1 | P | OP2 | 113.3° | 109.5° |
| OP1 | P | OP3 | 115.6° | 109.5° |
| F01 | C2' | H2' | 110.7° | 110.6° |
| C6 | N1 | C2 | 110.7° | 120.6° |
| N1 | C6 | C5 | 125.5° | 119.6° |
| N1 | C6 | H6 | 117.2° | 120.2° |
| N1 | C2 | O2 | 114.5° | 119.5° |
| N1 | C2 | N3 | 118.0° | 121.0° |
| OP2 | P | OP3 | 110.2° | 109.5° |
| P | OP2 | HOP2 | 109.5° | 113.9° |
| P | OP3 | HOP3 | 109.5° | 114.0° |
| O2 | C2 | N3 | 127.4° | 119.5° |
| C6 | C5 | C7 | 122.7° | 120.5° |
| C6 | C5 | C4 | 120.5° | 119.1° |
| C5 | C6 | H6 | 117.2° | 120.2° |
| C2 | N3 | C4 | 117.3° | 120.2° |
| C2 | N3 | H3 | 121.3° | 119.9° |
| O07 | C7 | C5 | 110.7° | 109.4° |
| O07 | C7 | H71 | 109.1° | 109.5° |
| O07 | C7 | H72 | 109.2° | 109.5° |
| C7 | O07 | HO7 | 109.5° | 114.0° |
| C7 | C5 | C4 | 116.6° | 120.4° |
| C5 | C7 | H71 | 109.2° | 109.5° |
| C5 | C7 | H72 | 109.2° | 109.5° |
| C5 | C4 | N3 | 127.6° | 119.4° |
| C5 | C4 | O4 | 120.4° | 120.3° |
| N3 | C4 | O4 | 111.9° | 120.3° |
| C4 | N3 | H3 | 121.3° | 119.9° |
| H5' | C5' | H5'' | 109.5° | 109.4° |
| H71 | C7 | H72 | 109.5° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O3' | C3' | C4' | O4' | 116.4° | 142.7° |
| O3' | C3' | C4' | C2' | 123.8° | 118.7° |
| O3' | C3' | C4' | H3' | 120.9° | 122.7° |
| O3' | C3' | C4' | C5' | 121.6° | 98.5° |
| O3' | C3' | C2' | C1' | 122.8° | 118.8° |
| O3' | C3' | C2' | H3' | 120.6° | 122.6° |
| O3' | C3' | C2' | F01 | 118.3° | 122.6° |
| O3' | C3' | C4' | H4' | 1.2° | 23.8° |
| O3' | C3' | C2' | H2' | 1.2° | 0.1° |
| O4' | C4' | C3' | C5' | 121.9° | 118.9° |
| O4' | C4' | C3' | H4' | 117.7° | 118.9° |
| O4' | C4' | C5' | H4' | 119.5° | 122.3° |
| C4' | O4' | C1' | C2' | 9.8° | 40.5° |
| C4' | O4' | C1' | N1 | 108.7° | 159.3° |
| O4' | C4' | C5' | O5' | 57.6° | 69.6° |
| O4' | C4' | C3' | C2' | 7.3° | 24.0° |
| O4' | C4' | C3' | H3' | 122.6° | 94.7° |
| O4' | C4' | C5' | H5' | 177.7° | 170.4° |
| O4' | C4' | C5' | H5'' | 62.4° | 50.4° |
| C4' | O4' | C1' | H1' | 128.6° | 78.4° |
| C1' | O4' | C4' | C3' | 11.2° | 40.5° |
| C1' | O4' | C4' | C5' | 111.9° | 159.4° |
| O4' | C1' | C2' | N1 | 114.8° | 118.8° |
| O4' | C1' | C2' | H1' | 119.5° | 119.0° |
| O4' | C1' | N1 | H1' | 122.3° | 122.3° |
| O4' | C1' | C2' | C3' | 5.0° | 24.0° |
| O4' | C1' | C2' | F01 | 121.9° | 94.6° |
| O4' | C1' | N1 | C6 | 10.8° | 129.6° |
| O4' | C1' | N1 | C2 | 178.0° | 50.4° |
| C1' | O4' | C4' | H4' | 128.7° | 78.4° |
| O4' | C1' | C2' | H2' | 116.9° | 142.7° |
| C3' | C4' | C5' | H4' | 120.5° | 122.3° |
| C4' | C3' | C2' | C1' | 1.5° | 0.0° |
| C3' | C4' | C5' | O5' | 177.6° | 175.0° |
| C4' | C3' | C2' | H3' | 115.1° | 118.6° |
| C4' | C3' | C2' | F01 | 117.4° | 118.6° |
| C3' | C4' | C5' | H5' | 62.3° | 55.0° |
| C3' | C4' | C5' | H5'' | 57.5° | 65.0° |
| C4' | C3' | C2' | H2' | 123.1° | 118.7° |
| C4' | C3' | O3' | HO3' | 180.0° | 176.1° |
| C4' | C5' | O5' | H5' | 120.1° | 120.0° |
| C4' | C5' | O5' | H5'' | 120.1° | 120.0° |
| C4' | C5' | O5' | P | 172.4° | 180.0° |
| C5' | C4' | C3' | C2' | 114.6° | 142.8° |
| C5' | C4' | C3' | H3' | 0.7° | 24.2° |
| C4' | C5' | H5' | H5'' | 119.8° | 119.9° |
| C2' | C1' | N1 | H1' | 124.8° | 122.3° |
| C1' | C2' | C3' | F01 | 118.9° | 118.6° |
| C1' | C2' | C3' | H2' | 121.6° | 118.7° |
| C1' | C2' | F01 | H2' | 120.5° | 122.7° |
| C2' | C1' | N1 | C6 | 102.2° | 115.0° |
| C2' | C1' | N1 | C2 | 69.1° | 65.0° |
| C1' | C2' | C3' | H3' | 116.6° | 118.6° |
| N1 | C1' | C2' | C3' | 109.8° | 142.8° |
| N1 | C1' | C2' | F01 | 7.0° | 24.2° |
| C1' | N1 | C6 | C2 | 171.7° | 180.0° |
| C1' | N1 | C2 | O2 | 5.9° | 0.2° |
| C1' | N1 | C6 | C5 | 174.6° | 180.0° |
| C1' | N1 | C2 | N3 | 170.4° | 180.0° |
| C1' | N1 | C6 | H6 | 5.4° | 0.1° |
| N1 | C1' | C2' | H2' | 128.3° | 98.6° |
| C5' | O5' | P | OP1 | 176.9° | 55.0° |
| C5' | O5' | P | OP2 | 57.5° | 175.0° |
| C5' | O5' | P | OP3 | 61.0° | 65.0° |
| O5' | C5' | C4' | H4' | 61.9° | 52.7° |
| O5' | C5' | H5' | H5'' | 119.8° | 120.0° |
| O5' | P | OP1 | OP2 | 115.1° | 120.0° |
| O5' | P | OP1 | OP3 | 116.3° | 120.0° |
| O5' | P | OP2 | OP3 | 116.6° | 120.0° |
| P | O5' | C5' | H5' | 67.6° | 60.0° |
| P | O5' | C5' | H5'' | 52.3° | 60.0° |
| O5' | P | OP3 | HOP3 | 113.4° | 60.0° |
| O5' | P | OP2 | HOP2 | 112.1° | 180.0° |
| C3' | C2' | F01 | H2' | 118.9° | 122.7° |
| C2' | C3' | C4' | H4' | 125.0° | 94.9° |
| C3' | C2' | C1' | H1' | 124.5° | 95.0° |
| C2' | C3' | O3' | HO3' | 60.8° | 61.5° |
| OP1 | P | OP2 | OP3 | 131.3° | 120.0° |
| OP1 | P | OP3 | HOP3 | 0.0° | 180.0° |
| OP1 | P | OP2 | HOP2 | 0.0° | 60.0° |
| F01 | C2' | C3' | H3' | 2.3° | 0.0° |
| F01 | C2' | C1' | H1' | 118.6° | 146.4° |
| C6 | N1 | C2 | O2 | 178.9° | 179.8° |
| N1 | C6 | C5 | H6 | 180.0° | 179.9° |
| C6 | N1 | C2 | N3 | 2.6° | 0.0° |
| N1 | C6 | C5 | C7 | 179.4° | 180.0° |
| N1 | C6 | C5 | C4 | 6.4° | 0.0° |
| C6 | N1 | C1' | H1' | 133.1° | 7.3° |
| N1 | C2 | O2 | N3 | 175.8° | 179.8° |
| C2 | N1 | C6 | C5 | 2.9° | 0.0° |
| N1 | C2 | N3 | C4 | 4.3° | 0.1° |
| C2 | N1 | C1' | H1' | 55.7° | 172.7° |
| C2 | N1 | C6 | H6 | 177.1° | 180.0° |
| N1 | C2 | N3 | H3 | 175.7° | 180.0° |
| OP2 | P | OP3 | HOP3 | 130.1° | 60.0° |
| OP3 | P | OP2 | HOP2 | 131.3° | 60.0° |
| O2 | C2 | N3 | C4 | 180.0° | 179.7° |
| O2 | C2 | N3 | H3 | 0.0° | 0.2° |
| C6 | C5 | C7 | O07 | 31.4° | 0.0° |
| C6 | C5 | C7 | C4 | 174.4° | 180.0° |
| C6 | C5 | C4 | N3 | 4.6° | 0.0° |
| C6 | C5 | C4 | O4 | 175.9° | 180.0° |
| C6 | C5 | C7 | H71 | 151.6° | 119.9° |
| C6 | C5 | C7 | H72 | 88.7° | 120.0° |
| C2 | N3 | C4 | C5 | 1.1° | 0.1° |
| C2 | N3 | C4 | H3 | 180.0° | 179.9° |
| C2 | N3 | C4 | O4 | 178.4° | 180.0° |
| O07 | C7 | C5 | H71 | 120.2° | 119.9° |
| O07 | C7 | C5 | H72 | 120.2° | 120.0° |
| O07 | C7 | C5 | C4 | 154.2° | 180.0° |
| O07 | C7 | H71 | H72 | 119.5° | 120.0° |
| C7 | C5 | C4 | N3 | 179.1° | 180.0° |
| C7 | C5 | C4 | O4 | 1.4° | 0.1° |
| C5 | C7 | H71 | H72 | 119.5° | 120.0° |
| C7 | C5 | C6 | H6 | 0.6° | 0.0° |
| C5 | C7 | O07 | HO7 | 180.0° | 180.0° |
| C5 | C4 | N3 | O4 | 179.5° | 179.9° |
| C4 | C5 | C7 | H71 | 34.0° | 60.0° |
| C4 | C5 | C7 | H72 | 85.6° | 60.0° |
| C4 | C5 | C6 | H6 | 173.6° | 179.9° |
| C5 | C4 | N3 | H3 | 178.9° | 180.0° |
| O4 | C4 | N3 | H3 | 1.6° | 0.1° |
| H3' | C3' | C4' | H4' | 119.7° | 146.4° |
| H3' | C3' | C2' | H2' | 121.8° | 122.7° |
| H3' | C3' | O3' | HO3' | 59.5° | 61.2° |
| H4' | C4' | C5' | H5' | 58.2° | 67.3° |
| H4' | C4' | C5' | H5'' | 178.0° | 172.7° |
| H1' | C1' | C2' | H2' | 2.6° | 23.7° |
| H71 | C7 | O07 | HO7 | 59.8° | 60.1° |
| H72 | C7 | O07 | HO7 | 59.8° | 60.0° |
