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A1AYC

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.53Å1.53Å
C2C3sing1.53Å1.53Å
C2C4sing1.53Å1.53Å
C2C5sing1.51Å1.52Å
C5C6doub1.34Å1.37ÅAromatic
C5S1sing1.71Å1.73ÅAromatic
C6C7sing1.37Å1.45ÅAromatic
C7C8doub1.37Å1.42ÅAromatic
C8S1sing1.76Å1.73ÅAromatic
C8C9sing1.47Å1.49Å
C9O1doub1.22Å1.23Å
C9N1sing1.35Å1.34Å
N1C10sing1.47Å1.47Å
N1C13sing1.47Å1.47Å
C10C11sing1.55Å1.51Å
C11C12sing1.55Å1.50Å
C12C13sing1.54Å1.51Å
C11H112sing1.09Å1.10Å
C11H113sing1.09Å1.10Å
C12H122sing1.09Å1.10Å
C12H123sing1.09Å1.10Å
C13H133sing1.09Å1.10Å
C13H132sing1.09Å1.10Å
C4H43sing1.09Å1.10Å
C4H41sing1.09Å1.10Å
C4H42sing1.09Å1.10Å
C1H13sing1.09Å1.10Å
C1H12sing1.09Å1.10Å
C1H11sing1.09Å1.10Å
C10H102sing1.09Å1.10Å
C10H103sing1.09Å1.10Å
C3H33sing1.09Å1.10Å
C3H31sing1.09Å1.10Å
C3H32sing1.09Å1.10Å
C6H6sing1.08Å1.08Å
C7H7sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1C2C3105.6°109.5°
C1C2C4110.1°109.5°
C1C2C5111.4°109.5°
C2C1H13109.5°109.4°
C2C1H12109.5°109.5°
C2C1H11109.5°109.5°
C3C2C4106.1°109.5°
C3C2C5111.3°109.5°
C2C3H33109.5°109.5°
C2C3H31109.4°109.4°
C2C3H32109.5°109.5°
C4C2C5112.0°109.4°
C2C4H43109.5°109.5°
C2C4H41109.4°109.5°
C2C4H42109.5°109.4°
C2C5C6131.9°124.5°
C2C5S1117.1°124.6°
C6C5S1111.0°110.9°
C5C6C7113.7°115.1°
C5C6H6123.2°122.4°
C5S1C893.2°91.6°
C6C7C8111.5°113.3°
C7C6H6123.2°122.4°
C6C7H7124.2°123.4°
C7C8S1110.2°109.1°
C7C8C9127.5°125.5°
C8C7H7124.2°123.3°
S1C8C9122.2°125.4°
C8C9O1121.0°119.9°
C8C9N1117.7°120.0°
O1C9N1121.2°120.0°
C9N1C10126.7°125.6°
C9N1C13123.3°125.7°
C10N1C13110.0°108.7°
N1C10C11101.1°104.8°
N1C10H102111.5°110.4°
N1C10H103111.5°110.5°
N1C13C12102.8°107.3°
N1C13H133111.1°109.9°
N1C13H132111.1°110.0°
C10C11C12100.5°101.6°
C10C11H112111.7°111.0°
C10C11H113111.7°111.1°
C11C10H102111.5°110.4°
C11C10H103111.5°110.4°
C11C12C13102.3°102.9°
C12C11H112111.7°111.0°
C12C11H113111.7°111.0°
C11C12H122111.2°110.7°
C11C12H123111.2°110.8°
C13C12H122111.2°110.7°
C13C12H123111.2°110.7°
C12C13H133111.1°109.9°
C12C13H132111.1°109.9°
H112C11H113109.5°110.9°
H122C12H123109.5°110.7°
H133C13H132109.5°109.9°
H43C4H41109.5°109.5°
H43C4H42109.5°109.4°
H41C4H42109.5°109.5°
H13C1H12109.5°109.5°
H13C1H11109.4°109.4°
H12C1H11109.5°109.5°
H102C10H103109.4°110.3°
H33C3H31109.5°109.5°
H33C3H32109.5°109.5°
H31C3H32109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1C2C3C4116.9°120.0°
C1C2C3C5121.0°120.0°
C1C2C4C5124.6°120.0°
C1C2C5C6153.0°60.0°
C1C2C5S122.7°120.2°
C1C2C4H43180.0°59.9°
C1C2C4H4160.0°180.0°
C1C2C4H4260.0°60.0°
C2C1H13H12120.0°120.0°
C2C1H13H11120.0°120.0°
C2C1H12H11120.0°120.0°
C1C2C3H33180.0°60.0°
C1C2C3H3160.0°180.0°
C1C2C3H3260.0°60.0°
C3C2C4C5121.6°120.0°
C3C2C5C689.5°60.0°
C3C2C5S194.8°119.7°
C3C2C4H4366.2°180.0°
C3C2C4H41173.8°60.0°
C3C2C4H4253.8°60.0°
C3C2C1H13180.0°60.0°
C3C2C1H1260.0°180.0°
C3C2C1H1160.0°60.0°
C2C3H33H31120.0°120.0°
C2C3H33H32120.0°120.0°
C2C3H31H32120.0°120.0°
C4C2C5C629.1°180.0°
C4C2C5S1146.6°0.3°
C2C4H43H41120.0°120.0°
C2C4H43H42120.0°119.9°
C2C4H41H42120.0°120.0°
C4C2C1H1365.8°180.0°
C4C2C1H12174.2°60.0°
C4C2C1H1154.2°60.1°
C4C2C3H3363.1°60.0°
C4C2C3H3157.0°60.0°
C4C2C3H32176.9°180.0°
C2C5C6S1175.9°179.8°
C2C5C6C7179.4°180.0°
C2C5S1C8177.1°179.9°
C5C2C4H4355.4°60.0°
C5C2C4H4164.6°60.0°
C5C2C4H42175.4°180.0°
C5C2C1H1359.1°60.1°
C5C2C1H1260.9°60.0°
C5C2C1H11179.1°180.0°
C5C2C3H3359.0°180.0°
C5C2C3H31179.0°60.0°
C5C2C3H3261.0°60.0°
C2C5C6H60.6°0.0°
C5C6C7H6180.0°180.0°
C5C6C7C80.1°0.0°
C6C5S1C86.4°0.3°
C5C6C7H7179.8°180.0°
S1C5C6C74.8°0.2°
C5S1C8C76.2°0.3°
C5S1C8C9177.2°180.0°
S1C5C6H6175.2°179.8°
C6C7C8H7180.0°179.9°
C6C7C8S14.6°0.3°
C6C7C8C9179.1°180.0°
C7C8S1C9176.6°179.7°
C7C8C9O198.0°0.0°
C7C8C9N184.6°180.0°
C8C7C6H6179.9°180.0°
S1C8C9O177.9°179.7°
S1C8C9N199.4°0.3°
S1C8C7H7175.5°179.8°
C8C9O1N1177.3°180.0°
C8C9N1C10156.3°180.0°
C8C9N1C1320.9°0.0°
C9C8C7H70.9°0.1°
O1C9N1C1021.0°0.0°
O1C9N1C13161.7°180.0°
C9N1C10C13177.5°180.0°
C9N1C10C11153.3°155.9°
C9N1C13C12177.7°178.9°
C9N1C13H13358.8°59.5°
C9N1C13H13263.3°61.6°
C9N1C10H10234.7°85.3°
C9N1C10H10388.0°36.9°
N1C10C11H102118.6°118.8°
N1C10C11H103118.7°119.0°
N1C10C11C1243.3°37.0°
C10N1C13C124.6°1.1°
N1C10C11H11275.2°155.1°
N1C10C11H113161.9°81.1°
C10N1C13H133123.5°120.5°
C10N1C13H132114.3°118.4°
N1C10H102H103123.9°122.4°
C13N1C10C1124.2°24.2°
N1C13C12C1132.1°22.2°
N1C13C12H133118.9°119.4°
N1C13C12H132118.9°119.6°
N1C13C12H122150.9°140.5°
N1C13C12H12386.7°96.2°
N1C13H133H132123.1°121.2°
C13N1C10H102142.8°94.7°
C13N1C10H10394.5°143.1°
C10C11C12H112118.5°118.0°
C10C11C12H113118.5°118.2°
C10C11C12C1347.1°35.5°
C10C11H112H113124.2°124.0°
C10C11C12H122166.0°153.9°
C10C11C12H12371.7°82.9°
C11C10H102H103123.9°122.2°
C11C12C13H122118.8°118.4°
C11C12C13H123118.8°118.4°
C12C11H112H113124.2°123.9°
C11C12H122H123123.3°123.3°
C11C12C13H133151.0°97.2°
C11C12C13H13286.8°141.8°
C12C11C10H102162.0°81.8°
C12C11C10H10375.3°156.0°
C13C12C11H11271.4°153.5°
C13C12C11H113165.7°82.7°
C13C12H122H123123.3°123.2°
C12C13H133H132123.1°121.0°
H112C11C12H12247.5°88.1°
H112C11C12H123169.8°35.2°
H112C11C10H10243.5°36.2°
H112C11C10H103166.2°86.0°
H113C11C12H12275.5°35.7°
H113C11C12H12346.8°159.0°
H113C11C10H10279.5°160.1°
H113C11C10H10343.2°37.9°
H122C12C13H13390.1°21.1°
H122C12C13H13232.0°99.8°
H123C12C13H13332.2°144.4°
H123C12C13H132154.3°23.4°
H43C4H41H42120.0°120.0°
H13C1H12H11119.9°120.0°
H33C3H31H32120.0°120.0°
H6C6C7H70.2°0.1°

248335

PDB entries from 2026-01-28

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