A1AYA
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| C1 | N1 | sing | 1.47Å | 1.49Å | |
| N1 | C2 | sing | 1.47Å | 1.50Å | |
| N1 | C5 | sing | 1.47Å | 1.50Å | |
| C2 | C3 | sing | 1.53Å | 1.51Å | |
| C3 | N2 | sing | 1.47Å | 1.46Å | |
| N2 | C4 | sing | 1.47Å | 1.46Å | |
| N2 | C6 | sing | 1.40Å | 1.43Å | |
| C4 | C5 | sing | 1.53Å | 1.51Å | |
| C6 | C7 | doub | 1.39Å | 1.39Å | Aromatic |
| C6 | C11 | sing | 1.39Å | 1.41Å | Aromatic |
| C7 | C8 | sing | 1.38Å | 1.38Å | Aromatic |
| C8 | C9 | doub | 1.38Å | 1.38Å | Aromatic |
| C9 | C10 | sing | 1.38Å | 1.38Å | Aromatic |
| C10 | C11 | doub | 1.38Å | 1.39Å | Aromatic |
| C11 | C12 | sing | 1.51Å | 1.51Å | |
| C12 | O1 | sing | 1.43Å | 1.42Å | |
| C10 | HC11 | sing | 1.08Å | 1.08Å | |
| C12 | HC12 | sing | 1.09Å | 1.10Å | |
| C12 | HC13 | sing | 1.09Å | 1.10Å | |
| C1 | HC15 | sing | 1.09Å | 1.10Å | |
| C1 | HC16 | sing | 1.09Å | 1.10Å | |
| C1 | HC14 | sing | 1.09Å | 1.10Å | |
| C2 | HC3 | sing | 1.09Å | 1.10Å | |
| C2 | HC2 | sing | 1.09Å | 1.10Å | |
| C3 | HC5 | sing | 1.09Å | 1.10Å | |
| C3 | HC4 | sing | 1.09Å | 1.10Å | |
| C4 | HC7 | sing | 1.09Å | 1.10Å | |
| C4 | HC6 | sing | 1.09Å | 1.10Å | |
| C5 | HC8 | sing | 1.09Å | 1.10Å | |
| C5 | HC9 | sing | 1.09Å | 1.10Å | |
| C7 | HC | sing | 1.08Å | 1.08Å | |
| C8 | HC1 | sing | 1.08Å | 1.08Å | |
| C9 | HC10 | sing | 1.08Å | 1.08Å | |
| O1 | HO | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| C1 | N1 | C2 | 111.8° | 111.0° |
| C1 | N1 | C5 | 111.2° | 111.0° |
| N1 | C1 | HC15 | 109.5° | 109.5° |
| N1 | C1 | HC16 | 109.5° | 109.5° |
| N1 | C1 | HC14 | 109.5° | 109.4° |
| C2 | N1 | C5 | 111.2° | 110.9° |
| N1 | C2 | C3 | 110.9° | 109.3° |
| N1 | C2 | HC3 | 109.1° | 109.5° |
| N1 | C2 | HC2 | 109.1° | 109.5° |
| N1 | C5 | C4 | 111.4° | 109.3° |
| N1 | C5 | HC8 | 109.0° | 109.6° |
| N1 | C5 | HC9 | 109.0° | 109.5° |
| C2 | C3 | N2 | 109.8° | 109.3° |
| C3 | C2 | HC3 | 109.1° | 109.5° |
| C3 | C2 | HC2 | 109.1° | 109.5° |
| C2 | C3 | HC5 | 109.4° | 109.5° |
| C2 | C3 | HC4 | 109.4° | 109.4° |
| C3 | N2 | C4 | 114.7° | 110.9° |
| C3 | N2 | C6 | 123.6° | 111.0° |
| N2 | C3 | HC5 | 109.4° | 109.5° |
| N2 | C3 | HC4 | 109.4° | 109.5° |
| C4 | N2 | C6 | 121.7° | 111.0° |
| N2 | C4 | C5 | 110.0° | 109.4° |
| N2 | C4 | HC7 | 109.4° | 109.5° |
| N2 | C4 | HC6 | 109.3° | 109.5° |
| N2 | C6 | C7 | 119.6° | 120.1° |
| N2 | C6 | C11 | 120.7° | 120.1° |
| C5 | C4 | HC7 | 109.3° | 109.4° |
| C5 | C4 | HC6 | 109.3° | 109.5° |
| C4 | C5 | HC8 | 109.0° | 109.5° |
| C4 | C5 | HC9 | 109.0° | 109.4° |
| C7 | C6 | C11 | 119.7° | 119.9° |
| C6 | C7 | C8 | 120.7° | 119.9° |
| C6 | C7 | HC | 119.7° | 120.0° |
| C6 | C11 | C10 | 118.4° | 119.9° |
| C6 | C11 | C12 | 123.2° | 120.1° |
| C7 | C8 | C9 | 120.1° | 120.1° |
| C8 | C7 | HC | 119.7° | 120.0° |
| C7 | C8 | HC1 | 120.0° | 120.0° |
| C8 | C9 | C10 | 119.9° | 120.1° |
| C9 | C8 | HC1 | 119.9° | 120.0° |
| C8 | C9 | HC10 | 120.1° | 119.9° |
| C9 | C10 | C11 | 121.2° | 120.1° |
| C9 | C10 | HC11 | 119.4° | 119.9° |
| C10 | C9 | HC10 | 120.0° | 120.0° |
| C10 | C11 | C12 | 118.5° | 120.0° |
| C11 | C10 | HC11 | 119.4° | 120.0° |
| C11 | C12 | O1 | 112.9° | 109.5° |
| C11 | C12 | HC12 | 108.6° | 109.4° |
| C11 | C12 | HC13 | 108.6° | 109.5° |
| O1 | C12 | HC12 | 108.6° | 109.5° |
| O1 | C12 | HC13 | 108.6° | 109.5° |
| C12 | O1 | HO | 109.5° | 114.0° |
| HC12 | C12 | HC13 | 109.5° | 109.5° |
| HC15 | C1 | HC16 | 109.5° | 109.5° |
| HC15 | C1 | HC14 | 109.4° | 109.5° |
| HC16 | C1 | HC14 | 109.5° | 109.4° |
| HC3 | C2 | HC2 | 109.5° | 109.6° |
| HC5 | C3 | HC4 | 109.5° | 109.6° |
| HC7 | C4 | HC6 | 109.4° | 109.5° |
| HC8 | C5 | HC9 | 109.5° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| C1 | N1 | C2 | C5 | 124.9° | 123.9° |
| C1 | N1 | C2 | C3 | 73.2° | 176.8° |
| C1 | N1 | C5 | C4 | 130.8° | 176.8° |
| N1 | C1 | HC15 | HC16 | 120.0° | 120.0° |
| N1 | C1 | HC15 | HC14 | 120.0° | 120.0° |
| N1 | C1 | HC16 | HC14 | 120.0° | 120.0° |
| C1 | N1 | C2 | HC3 | 166.6° | 63.3° |
| C1 | N1 | C2 | HC2 | 47.0° | 56.9° |
| C1 | N1 | C5 | HC8 | 10.5° | 56.8° |
| C1 | N1 | C5 | HC9 | 108.9° | 63.3° |
| N1 | C2 | C3 | HC3 | 120.2° | 119.9° |
| N1 | C2 | C3 | HC2 | 120.2° | 119.9° |
| N1 | C2 | C3 | N2 | 58.5° | 58.4° |
| C2 | N1 | C5 | C4 | 5.5° | 59.3° |
| C2 | N1 | C1 | HC15 | 180.0° | 60.0° |
| C2 | N1 | C1 | HC16 | 60.0° | 180.0° |
| C2 | N1 | C1 | HC14 | 60.0° | 60.0° |
| N1 | C2 | HC3 | HC2 | 119.3° | 120.1° |
| N1 | C2 | C3 | HC5 | 178.6° | 61.6° |
| N1 | C2 | C3 | HC4 | 61.5° | 178.4° |
| C2 | N1 | C5 | HC8 | 114.8° | 179.3° |
| C2 | N1 | C5 | HC9 | 125.8° | 60.5° |
| C5 | N1 | C2 | C3 | 51.7° | 59.4° |
| N1 | C5 | C4 | N2 | 57.0° | 58.4° |
| N1 | C5 | C4 | HC8 | 120.3° | 120.0° |
| N1 | C5 | C4 | HC9 | 120.3° | 119.9° |
| C5 | N1 | C1 | HC15 | 55.1° | 176.2° |
| C5 | N1 | C1 | HC16 | 64.9° | 56.1° |
| C5 | N1 | C1 | HC14 | 175.0° | 63.8° |
| C5 | N1 | C2 | HC3 | 68.5° | 60.6° |
| C5 | N1 | C2 | HC2 | 171.9° | 179.3° |
| N1 | C5 | C4 | HC7 | 63.1° | 178.3° |
| N1 | C5 | C4 | HC6 | 177.2° | 61.7° |
| N1 | C5 | HC8 | HC9 | 119.1° | 120.1° |
| C2 | C3 | N2 | HC5 | 120.1° | 119.9° |
| C2 | C3 | N2 | HC4 | 120.0° | 119.9° |
| C2 | C3 | N2 | C4 | 5.7° | 59.4° |
| C2 | C3 | N2 | C6 | 175.1° | 176.8° |
| C3 | C2 | HC3 | HC2 | 119.4° | 120.1° |
| C2 | C3 | HC5 | HC4 | 119.9° | 120.0° |
| C3 | N2 | C4 | C6 | 179.2° | 123.8° |
| C3 | N2 | C4 | C5 | 51.1° | 59.4° |
| C3 | N2 | C6 | C7 | 105.6° | 59.9° |
| C3 | N2 | C6 | C11 | 75.5° | 120.0° |
| N2 | C3 | C2 | HC3 | 61.7° | 61.5° |
| N2 | C3 | C2 | HC2 | 178.7° | 178.4° |
| N2 | C3 | HC5 | HC4 | 119.9° | 120.1° |
| C3 | N2 | C4 | HC7 | 69.0° | 179.3° |
| C3 | N2 | C4 | HC6 | 171.2° | 60.6° |
| N2 | C4 | C5 | HC7 | 120.1° | 120.0° |
| N2 | C4 | C5 | HC6 | 120.1° | 120.0° |
| C4 | N2 | C6 | C7 | 73.4° | 63.8° |
| C4 | N2 | C6 | C11 | 105.5° | 116.2° |
| C4 | N2 | C3 | HC5 | 125.8° | 60.5° |
| C4 | N2 | C3 | HC4 | 114.3° | 179.3° |
| N2 | C4 | HC7 | HC6 | 119.8° | 120.1° |
| N2 | C4 | C5 | HC8 | 63.3° | 178.4° |
| N2 | C4 | C5 | HC9 | 177.3° | 61.6° |
| C6 | N2 | C4 | C5 | 128.1° | 176.8° |
| N2 | C6 | C7 | C11 | 178.9° | 180.0° |
| N2 | C6 | C7 | C8 | 179.9° | 180.0° |
| N2 | C6 | C11 | C10 | 179.8° | 180.0° |
| N2 | C6 | C11 | C12 | 0.8° | 0.0° |
| C6 | N2 | C3 | HC5 | 55.1° | 63.3° |
| C6 | N2 | C3 | HC4 | 64.9° | 56.9° |
| C6 | N2 | C4 | HC7 | 111.8° | 56.9° |
| C6 | N2 | C4 | HC6 | 8.0° | 63.2° |
| N2 | C6 | C7 | HC | 0.1° | 0.0° |
| C5 | C4 | HC7 | HC6 | 119.7° | 120.0° |
| C4 | C5 | HC8 | HC9 | 119.1° | 120.0° |
| C6 | C7 | C8 | HC | 180.0° | 179.9° |
| C6 | C7 | C8 | C9 | 0.5° | 0.3° |
| C7 | C6 | C11 | C10 | 0.9° | 0.1° |
| C7 | C6 | C11 | C12 | 179.7° | 180.0° |
| C6 | C7 | C8 | HC1 | 179.5° | 180.0° |
| C11 | C6 | C7 | C8 | 0.9° | 0.1° |
| C6 | C11 | C10 | C9 | 0.5° | 0.3° |
| C6 | C11 | C10 | C12 | 179.4° | 180.0° |
| C6 | C11 | C12 | O1 | 105.8° | 180.0° |
| C6 | C11 | C10 | HC11 | 179.6° | 179.9° |
| C6 | C11 | C12 | HC12 | 133.7° | 60.0° |
| C6 | C11 | C12 | HC13 | 14.7° | 59.9° |
| C11 | C6 | C7 | HC | 179.1° | 180.0° |
| C7 | C8 | C9 | HC1 | 180.0° | 179.7° |
| C7 | C8 | C9 | C10 | 0.1° | 0.5° |
| C7 | C8 | C9 | HC10 | 180.0° | 180.0° |
| C8 | C9 | C10 | HC10 | 180.0° | 179.5° |
| C8 | C9 | C10 | C11 | 0.0° | 0.5° |
| C8 | C9 | C10 | HC11 | 180.0° | 179.7° |
| C9 | C8 | C7 | HC | 179.5° | 179.8° |
| C9 | C10 | C11 | HC11 | 180.0° | 179.8° |
| C9 | C10 | C11 | C12 | 179.9° | 179.7° |
| C10 | C9 | C8 | HC1 | 180.0° | 179.7° |
| C10 | C11 | C12 | O1 | 73.6° | 0.0° |
| C10 | C11 | C12 | HC12 | 46.9° | 120.0° |
| C10 | C11 | C12 | HC13 | 165.9° | 120.0° |
| C11 | C10 | C9 | HC10 | 180.0° | 180.0° |
| C11 | C12 | O1 | HC12 | 120.5° | 119.9° |
| C11 | C12 | O1 | HC13 | 120.5° | 120.0° |
| C12 | C11 | C10 | HC11 | 0.1° | 0.0° |
| C11 | C12 | HC12 | HC13 | 118.4° | 119.9° |
| C11 | C12 | O1 | HO | 180.0° | 180.0° |
| O1 | C12 | HC12 | HC13 | 118.5° | 120.1° |
| HC11 | C10 | C9 | HC10 | 0.0° | 0.2° |
| HC12 | C12 | O1 | HO | 59.5° | 60.1° |
| HC13 | C12 | O1 | HO | 59.5° | 60.0° |
| HC15 | C1 | HC16 | HC14 | 119.9° | 120.0° |
| HC3 | C2 | C3 | HC5 | 58.4° | 178.5° |
| HC3 | C2 | C3 | HC4 | 178.3° | 58.4° |
| HC2 | C2 | C3 | HC5 | 61.2° | 58.4° |
| HC2 | C2 | C3 | HC4 | 58.7° | 61.7° |
| HC7 | C4 | C5 | HC8 | 176.6° | 61.6° |
| HC7 | C4 | C5 | HC9 | 57.2° | 58.4° |
| HC6 | C4 | C5 | HC8 | 56.8° | 58.4° |
| HC6 | C4 | C5 | HC9 | 62.6° | 178.4° |
| HC | C7 | C8 | HC1 | 0.5° | 0.0° |
| HC1 | C8 | C9 | HC10 | 0.0° | 0.2° |






