Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

A1AKI

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CNsing1.47Å1.45Å
NN1sing1.40Å1.36ÅAromatic
N1C1doub1.30Å1.31ÅAromatic
C1C2sing1.41Å1.42ÅAromatic
C2C3doub1.41Å1.40ÅAromatic
C3C4sing1.48Å1.50Å
OC4doub1.22Å1.23Å
C4N2sing1.35Å1.34Å
N2C5sing1.46Å1.46Å
C6C5sing1.53Å1.52Å
C7C6sing1.51Å1.51Å
O1C7doub1.21Å1.23Å
O2C7sing1.34Å1.31Å
C5C8sing1.51Å1.52Å
C8C9doub1.38Å1.39ÅAromatic
C9C10sing1.38Å1.38ÅAromatic
C10C11doub1.38Å1.38ÅAromatic
C11BRsing1.89Å1.90Å
C12C11sing1.38Å1.37ÅAromatic
C13C12doub1.38Å1.38ÅAromatic
C8C13sing1.38Å1.39ÅAromatic
C14C3sing1.39Å1.39ÅAromatic
C15C14doub1.39Å1.39ÅAromatic
N3C15sing1.31Å1.34ÅAromatic
C16N3doub1.33Å1.34ÅAromatic
C2C16sing1.41Å1.39ÅAromatic
NC16sing1.37Å1.35ÅAromatic
C5Hsing1.09Å1.10Å
C6H7sing1.09Å1.10Å
C6H6sing1.09Å1.10Å
C10H10sing1.08Å1.08Å
C13H12sing1.08Å1.08Å
C15H14sing1.08Å1.08Å
C9H9sing1.08Å1.08Å
C12H11sing1.08Å1.08Å
O2H8sing0.97Å0.95Å
N2H5sing0.97Å1.00Å
C14H13sing1.08Å1.08Å
CH2sing1.09Å1.10Å
CH3sing1.09Å1.10Å
CH1sing1.09Å1.10Å
C1H4sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CNN1120.7°125.9°
CNC16128.2°125.9°
NCH2109.5°109.5°
NCH3109.5°109.5°
NCH1109.5°109.5°
NN1C1106.4°109.7°
N1NC16110.8°108.2°
N1C1C2111.1°108.6°
N1C1H4124.4°125.7°
C1C2C3138.2°134.0°
C1C2C16104.4°107.1°
C2C1H4124.4°125.7°
C2C3C4120.0°121.1°
C2C3C14117.6°117.8°
C3C2C16117.4°119.0°
C3C4O121.1°120.0°
C3C4N2116.7°120.0°
C4C3C14122.3°121.1°
OC4N2122.2°120.0°
C4N2C5122.3°120.0°
C4N2H5118.8°120.0°
N2C5C6105.4°109.5°
N2C5C8112.4°109.5°
N2C5H110.3°109.5°
C5N2H5118.8°120.0°
C5C6C7111.9°109.5°
C6C5C8109.6°109.5°
C6C5H109.4°109.5°
C5C6H7108.9°109.4°
C5C6H6108.9°109.5°
C6C7O1122.6°120.0°
C6C7O2113.7°120.0°
C7C6H7108.8°109.5°
C7C6H6108.9°109.5°
O1C7O2123.7°120.0°
C7O2H8109.5°117.0°
C5C8C9120.6°120.0°
C5C8C13121.2°120.0°
C8C5H109.5°109.5°
C8C9C10121.2°120.0°
C9C8C13118.2°120.0°
C8C9H9119.4°120.0°
C9C10C11119.0°120.0°
C9C10H10120.5°120.0°
C10C9H9119.4°120.0°
C10C11BR119.4°120.0°
C10C11C12121.3°120.0°
C11C10H10120.5°120.0°
BRC11C12119.2°120.1°
C11C12C13119.1°120.0°
C11C12H11120.5°120.0°
C12C13C8121.2°120.0°
C12C13H12119.4°120.0°
C13C12H11120.5°120.0°
C8C13H12119.4°120.0°
C3C14C15119.3°119.3°
C3C14H13120.4°120.3°
C14C15N3124.5°121.7°
C14C15H14117.8°119.1°
C15C14H13120.3°120.3°
C15N3C16115.1°121.9°
N3C15H14117.8°119.2°
N3C16C2125.9°120.2°
N3C16N127.1°133.4°
C2C16N107.0°106.4°
H7C6H6109.5°109.5°
H2CH3109.5°109.5°
H2CH1109.5°109.4°
H3CH1109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CNN1C16173.6°179.9°
CNN1C1168.3°180.0°
CNC16N313.7°0.0°
CNC16C2167.2°179.9°
NCH2H3120.0°120.0°
NCH2H1120.0°120.0°
NCH3H1120.0°120.0°
NN1C1C22.7°0.0°
N1NC16N3173.3°180.0°
N1NC16C25.8°0.0°
N1NCH20.0°90.0°
N1NCH3120.0°150.0°
N1NCH1120.0°29.9°
NN1C1H4177.3°179.9°
N1C1C2H4180.0°180.0°
N1C1C2C3180.0°180.0°
N1C1C2C160.8°0.0°
C1N1NC165.3°0.0°
C1C2C3C16179.2°179.9°
C1C2C3C47.3°0.1°
C1C2C3C14176.8°180.0°
C1C2C16N3175.2°180.0°
C1C2C16N3.9°0.0°
C2C3C4C14175.7°179.9°
C2C3C4O21.0°0.1°
C2C3C4N2157.0°179.9°
C2C3C14C150.3°0.1°
C3C2C16N34.3°0.0°
C3C2C16N176.7°180.0°
C2C3C14H13179.7°179.9°
C3C2C1H40.0°0.0°
C3C4ON2177.8°180.0°
C3C4N2C5177.6°175.0°
C4C3C14C15176.1°180.0°
C4C3C2C16173.5°180.0°
C3C4N2H52.4°4.9°
C4C3C14H133.9°0.0°
OC4N2C50.3°5.0°
OC4C3C14163.3°180.0°
OC4N2H5179.7°175.0°
C4N2C5H5180.0°179.9°
C4N2C5C6154.6°84.2°
C4N2C5C886.0°155.8°
N2C4C3C1418.8°0.0°
C4N2C5H36.6°35.8°
N2C5C6C8121.2°120.0°
N2C5C6H118.7°120.0°
N2C5C6C762.5°173.4°
N2C5C8H123.0°120.0°
N2C5C8C9166.0°140.0°
N2C5C8C1312.4°39.7°
N2C5C6H7177.2°53.4°
N2C5C6H657.9°66.6°
C5C6C7H7120.3°120.0°
C5C6C7H6120.4°120.0°
C5C6C7O1123.9°6.7°
C5C6C7O254.2°173.3°
C6C5C8H120.1°120.0°
C6C5C8C949.0°100.0°
C6C5C8C13129.4°80.3°
C5C6H7H6118.9°120.0°
C6C5N2H525.3°95.9°
C6C7O1O2177.9°180.0°
C7C6C5C858.8°66.6°
C7C6C5H178.9°53.4°
C7C6H7H6118.9°120.0°
C6C7O2H8178.1°179.9°
O1C7C6H73.6°113.3°
O1C7C6H6115.7°126.7°
O1C7O2H80.0°0.0°
O2C7C6H7174.6°66.7°
O2C7C6H666.2°53.3°
C5C8C9C13178.4°179.8°
C5C8C9C10179.3°180.0°
C5C8C13C12178.6°180.0°
C8C5C6H761.6°173.4°
C8C5C6H6179.1°53.4°
C5C8C13H121.4°0.1°
C5C8C9H90.7°0.0°
C8C5N2H594.1°24.1°
C8C9C10H9180.0°180.0°
C8C9C10C110.3°0.1°
C9C8C13C120.2°0.2°
C9C8C5H71.0°20.0°
C8C9C10H10179.7°179.7°
C9C8C13H12179.8°179.7°
C9C10C11H10180.0°179.6°
C9C10C11BR179.4°179.6°
C9C10C11C121.0°0.4°
C10C9C8C130.9°0.2°
C10C11BRC12179.7°180.0°
C10C11C12C131.7°0.4°
C11C10C9H9179.7°179.9°
C10C11C12H11178.3°179.8°
BRC11C12C13178.7°179.7°
BRC11C10H100.6°0.0°
BRC11C12H111.3°0.2°
C11C12C13H11180.0°179.9°
C11C12C13C81.1°0.1°
C12C11C10H10179.0°180.0°
C11C12C13H12178.9°180.0°
C12C13C8H12180.0°179.9°
C13C8C5H110.6°159.8°
C13C8C9H9179.1°179.8°
C8C13C12H11178.9°179.9°
C3C14C15H13180.0°180.0°
C3C14C15N31.8°0.0°
C14C3C2C162.4°0.1°
C3C14C15H14178.2°180.0°
C14C15N3H14180.0°180.0°
C14C15N3C160.3°0.0°
C15N3C16C22.8°0.0°
C15N3C16N178.3°180.0°
N3C15C14H13178.2°180.0°
N3C16C2N179.1°180.0°
C16N3C15H14179.7°180.0°
C16C2C1H4179.3°179.9°
C16NCH2172.4°90.0°
C16NCH352.4°30.0°
C16NCH167.6°150.0°
HC5C6H758.5°66.6°
HC5C6H660.7°173.4°
HC5N2H5143.4°144.1°
H10C10C9H90.3°0.3°
H12C13C12H111.1°0.1°
H14C15C14H131.8°0.0°
H2CH3H1120.0°119.9°

221716

PDB entries from 2024-06-26

PDB statisticsPDBj update infoContact PDBjnumon