Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

9XF

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C4C3doub1.39Å1.40ÅAromatic
C4C5sing1.37Å1.41ÅAromatic
C3C2sing1.38Å1.41ÅAromatic
C5C6doub1.40Å1.40ÅAromatic
C2C1doub1.39Å1.41ÅAromatic
C6C1sing1.41Å1.37ÅAromatic
C6C7sing1.46Å1.44ÅAromatic
C1O1sing1.35Å1.36ÅAromatic
C7C8doub1.36Å1.39ÅAromatic
O1C8sing1.35Å1.40ÅAromatic
C8C9sing1.48Å1.41Å
C9N1doub1.32Å1.34ÅAromatic
C9C12sing1.41Å1.37ÅAromatic
N6C14doub1.30Å1.26Å
N1C10sing1.33Å1.36ÅAromatic
N7C12sing1.38Å1.35Å
C12N2doub1.32Å1.36ÅAromatic
N4C14sing1.38Å1.34Å
N4C13sing1.35Å1.35Å
C14N5sing1.37Å1.34Å
C10C13sing1.47Å1.48Å
C10C11doub1.41Å1.39ÅAromatic
C13O2doub1.22Å1.21Å
N2C11sing1.33Å1.34ÅAromatic
C11N3sing1.38Å1.32Å
C2H1sing1.08Å1.08Å
C3H2sing1.08Å1.08Å
N3H3sing0.97Å1.00Å
N3H4sing0.97Å1.00Å
C4H5sing1.08Å1.08Å
C5H6sing1.08Å1.08Å
C7H7sing1.08Å1.08Å
N4H8sing0.97Å1.00Å
N6H9sing0.97Å1.00Å
N5H10sing0.97Å1.00Å
N5H11sing0.97Å1.00Å
N7H12sing0.97Å1.00Å
N7H13sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C3C4C5120.2°120.4°
C4C3C2119.9°120.7°
C4C3H2120.0°119.6°
C3C4H5119.9°119.7°
C4C5C6119.4°119.7°
C5C4H5119.9°119.8°
C4C5H6120.3°120.1°
C3C2C1118.5°119.9°
C3C2H1120.7°120.1°
C2C3H2120.0°119.7°
C5C6C1120.6°120.2°
C5C6C7134.8°134.2°
C6C5H6120.3°120.2°
C2C1C6121.4°119.1°
C2C1O1128.4°133.3°
C1C2H1120.8°120.0°
C1C6C7104.6°105.7°
C6C1O1110.2°107.6°
C6C7C8110.0°106.0°
C6C7H7125.0°127.0°
C1O1C8110.6°110.9°
C7C8O1104.6°109.8°
C7C8C9130.3°125.1°
C8C7H7125.0°127.0°
O1C8C9125.2°125.1°
C8C9N1115.9°120.0°
C8C9C12122.0°120.0°
N1C9C12122.0°119.9°
C9N1C10117.9°120.0°
C9C12N7123.5°120.0°
C9C12N2120.7°120.0°
N6C14N4116.8°120.0°
N6C14N5121.6°120.0°
C14N6H9112.0°120.0°
N1C10C13116.1°120.0°
N1C10C11119.9°120.0°
N7C12N2115.8°120.0°
C12N7H12109.5°120.0°
C12N7H13109.4°120.0°
C12N2C11117.6°120.0°
C14N4C13126.1°120.0°
N4C14N5121.2°120.0°
C14N4H8116.9°120.0°
N4C13C10118.0°120.0°
N4C13O2124.4°120.0°
C13N4H8116.9°120.0°
C14N5H10120.0°120.0°
C14N5H11120.0°120.1°
C13C10C11123.9°120.0°
C10C13O2117.3°120.0°
C10C11N2121.8°120.1°
C10C11N3121.2°120.0°
N2C11N3116.8°120.0°
C11N3H3109.5°120.0°
C11N3H4109.5°120.0°
H3N3H4109.5°120.0°
H10N5H11120.1°120.0°
H12N7H13109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C3C4C5H5180.0°179.9°
C4C3C2H2180.0°180.0°
C3C4C5C61.5°0.2°
C4C3C2C11.0°0.0°
C4C3C2H1179.0°180.0°
C3C4C5H6178.5°180.0°
C5C4C3C21.2°0.0°
C4C5C6H6180.0°179.7°
C4C5C6C10.5°0.5°
C4C5C6C7178.5°180.0°
C5C4C3H2178.8°180.0°
C3C2C1H1180.0°180.0°
C3C2C1C63.1°0.3°
C3C2C1O1179.1°179.9°
C2C3C4H5178.8°180.0°
C5C6C1C22.8°0.6°
C5C6C1C7179.3°179.6°
C5C6C1O1179.0°179.7°
C5C6C7C8179.3°180.0°
C6C5C4H5178.6°179.7°
C5C6C7H70.7°0.0°
C2C1C6O1178.2°179.7°
C2C1C6C7176.5°179.8°
C2C1O1C8176.7°179.3°
C1C2C3H2178.9°180.0°
C1C6C7C81.5°0.5°
C6C1O1C81.3°0.3°
C6C1C2H1176.9°179.7°
C1C6C5H6179.5°179.7°
C1C6C7H7178.5°179.5°
C7C6C1O11.7°0.1°
C6C7C8H7180.0°180.0°
C6C7C8O10.8°0.7°
C6C7C8C9179.3°180.0°
C7C6C5H61.5°0.3°
C1O1C8C70.3°0.6°
C1O1C8C9178.3°180.0°
O1C1C2H10.9°0.1°
C7C8O1C9178.6°179.3°
C7C8C9N14.9°35.0°
C7C8C9C12178.5°145.0°
O1C8C9N1176.8°145.8°
O1C8C9C120.3°34.2°
O1C8C7H7179.3°179.3°
C8C9N1C12176.6°180.0°
C8C9N1C10177.4°180.0°
C8C9C12N73.0°0.0°
C8C9C12N2176.4°180.0°
C9C8C7H70.7°0.0°
N1C9C12N7179.3°180.0°
N1C9C12N20.0°0.0°
C9N1C10C13179.1°180.0°
C9N1C10C112.7°0.0°
C12C9N1C100.8°0.0°
C9C12N7N2179.4°180.0°
C9C12N2C111.2°0.0°
C9C12N7H12179.4°0.0°
C9C12N7H1360.6°180.0°
N6C14N4N5172.6°179.9°
N6C14N4C13173.2°0.0°
N6C14N4H86.8°179.9°
N6C14N5H10172.2°179.9°
N6C14N5H117.8°0.1°
N1C10C13N412.0°5.7°
N1C10C13C11176.3°180.0°
N1C10C13O2173.1°174.3°
N1C10C11N24.0°0.0°
N1C10C11N3178.8°180.0°
N7C12N2C11178.2°180.0°
C12N7H12H13120.0°180.0°
C12N2C11C103.2°0.0°
C12N2C11N3178.1°180.0°
N2C12N7H120.0°180.0°
N2C12N7H13120.0°0.0°
C14N4C13H8180.0°179.9°
C14N4C13C10161.5°180.0°
C14N4C13O224.0°0.0°
N4C14N6H9172.5°180.0°
N4C14N5H100.0°0.1°
N4C14N5H11180.0°180.0°
C13N4C14N50.6°180.0°
N4C13C10O2174.8°180.0°
N4C13C10C11171.7°174.3°
N5C14N4H8179.4°0.1°
N5C14N6H90.0°0.0°
C14N5H10H11180.0°179.8°
C13C10C11N2179.8°180.0°
C13C10C11N35.1°0.0°
C10C13N4H818.5°0.1°
C11C10C13O23.1°5.7°
C10C11N2N3174.9°180.0°
C10C11N3H3175.0°174.7°
C10C11N3H465.0°5.4°
O2C13N4H8156.0°179.9°
N2C11N3H30.0°5.4°
N2C11N3H4120.0°174.6°
C11N3H3H4120.0°179.9°
H1C2C3H21.1°0.1°
H2C3C4H51.1°0.1°
H5C4C5H61.5°0.0°

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon