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SummaryGeometryRelated PDB entries

9VQ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C11N12doub1.31Å1.33ÅAromatic
C11C10sing1.40Å1.39ÅAromatic
N12N08sing1.40Å1.36ÅAromatic
C13C14doub1.38Å1.39ÅAromatic
C13C06sing1.38Å1.39ÅAromatic
C14C03sing1.38Å1.39ÅAromatic
C10C09doub1.35Å1.36ÅAromatic
N08C07sing1.46Å1.46Å
N08C09sing1.35Å1.34ÅAromatic
O01C02sing1.43Å1.41Å
C07C06sing1.51Å1.51Å
C06C05doub1.38Å1.39ÅAromatic
C03C02sing1.51Å1.51Å
C03C04doub1.38Å1.39ÅAromatic
C05C04sing1.38Å1.38ÅAromatic
C10H23sing1.08Å1.08Å
C13H25sing1.08Å1.08Å
O01H15sing0.97Å0.95Å
C02H16sing1.09Å1.10Å
C02H17sing1.09Å1.10Å
C04H18sing1.08Å1.08Å
C05H19sing1.08Å1.08Å
C07H20sing1.09Å1.10Å
C07H21sing1.09Å1.10Å
C09H22sing1.08Å1.08Å
C11H24sing1.08Å1.08Å
C14H26sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
N12C11C10111.8°108.2°
C11N12N08104.2°108.2°
N12C11H24124.1°125.9°
C11C10C09104.9°107.9°
C11C10H23127.5°126.0°
C10C11H24124.1°125.9°
N12N08C07120.3°126.1°
N12N08C09111.8°107.9°
C14C13C06120.8°120.0°
C13C14C03121.0°120.0°
C14C13H25119.6°120.0°
C13C14H26119.5°120.0°
C13C06C07121.1°120.0°
C13C06C05118.1°120.0°
C06C13H25119.6°120.0°
C14C03C02121.6°120.0°
C14C03C04117.9°120.0°
C03C14H26119.5°120.0°
C10C09N08107.3°107.8°
C09C10H23127.6°126.1°
C10C09H22126.4°126.1°
C07N08C09127.9°126.0°
N08C07C06111.2°109.4°
N08C07H20109.0°109.5°
N08C07H21109.0°109.5°
N08C09H22126.3°126.1°
O01C02C03113.0°109.4°
C02O01H15109.5°114.0°
O01C02H16108.6°109.5°
O01C02H17108.6°109.5°
C07C06C05120.6°120.0°
C06C07H20109.0°109.5°
C06C07H21109.0°109.5°
C06C05C04121.1°120.0°
C06C05H19119.4°120.0°
C02C03C04120.4°120.0°
C03C02H16108.6°109.5°
C03C02H17108.6°109.5°
C03C04C05120.9°120.0°
C03C04H18119.5°120.0°
C05C04H18119.6°120.0°
C04C05H19119.5°120.1°
H16C02H17109.5°109.5°
H20C07H21109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
N12C11C10H24180.0°179.9°
N12C11C10C090.0°0.1°
C11N12N08C07179.6°180.0°
C11N12N08C093.1°0.4°
N12C11C10H23180.0°179.8°
C10C11N12N081.8°0.2°
C11C10C09H23180.0°179.7°
C11C10C09N081.9°0.3°
C11C10C09H22178.0°179.7°
N12N08C09C103.3°0.4°
N12N08C07C09176.8°179.6°
N12N08C07C0673.8°55.1°
N12N08C07H20165.9°175.0°
N12N08C07H2146.4°64.9°
N12N08C09H22176.7°179.6°
N08N12C11H24178.2°180.0°
C14C13C06H25180.0°179.7°
C13C14C03H26180.0°180.0°
C14C13C06C07177.9°180.0°
C14C13C06C053.3°0.1°
C13C14C03C02177.5°180.0°
C13C14C03C043.7°0.1°
C06C13C14C033.7°0.1°
C13C06C07N08103.2°90.0°
C13C06C07C05174.4°179.9°
C13C06C05C043.2°0.1°
C13C06C05H19176.9°179.9°
C13C06C07H20136.5°150.0°
C13C06C07H2117.0°29.9°
C06C13C14H26176.3°180.0°
C14C03C02O0110.3°90.0°
C14C03C02C04178.8°180.0°
C14C03C04C053.5°0.0°
C03C14C13H25176.3°179.7°
C14C03C02H16130.8°150.0°
C14C03C02H17110.2°30.0°
C14C03C04H18176.6°179.9°
C10C09N08C07179.7°180.0°
C10C09N08H22180.0°180.0°
C09C10C11H24179.9°179.8°
N08C07C06H20120.3°120.0°
N08C07C06H21120.3°120.0°
N08C07C06C0571.2°90.1°
N08C07H20H21119.2°120.1°
C07N08C09H220.3°0.1°
C09N08C07C06103.0°124.5°
N08C09C10H23178.1°180.0°
C09N08C07H2017.3°4.6°
C09N08C07H21136.8°115.5°
O01C02C03H16120.5°120.0°
O01C02C03H17120.5°120.0°
O01C02C03C04168.5°90.0°
O01C02H16H17118.4°120.0°
C07C06C05C04177.7°180.0°
C07C06C13H252.1°0.4°
C07C06C05H192.3°0.0°
C06C07H20H21119.2°120.0°
C06C05C04C033.3°0.0°
C06C05C04H19180.0°179.9°
C05C06C13H25176.7°179.7°
C06C05C04H18176.7°179.9°
C05C06C07H2049.1°29.9°
C05C06C07H21168.6°150.0°
C02C03C04C05177.7°180.0°
C03C02O01H15180.0°180.0°
C03C02H16H17118.4°120.0°
C02C03C04H182.3°0.0°
C02C03C14H262.5°0.0°
C03C04C05H18180.0°180.0°
C04C03C02H1648.0°30.0°
C04C03C02H1770.9°150.0°
C03C04C05H19176.7°179.9°
C04C03C14H26176.3°180.0°
H23C10C09H221.9°0.0°
H23C10C11H240.0°0.1°
H25C13C14H263.7°0.3°
H15O01C02H1659.5°60.0°
H15O01C02H1759.5°60.0°
H18C04C05H193.3°0.1°

246905

PDB entries from 2025-12-31

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