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9VN

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O4C3doub1.21Å1.24Å
C29C28sing1.50Å1.51Å
C29C30sing1.53Å1.50Å
O5C3sing1.34Å1.32Å
C28C27doub1.31Å1.32Å
C51C30sing1.53Å1.51Å
C3C1sing1.51Å1.51Å
C30C24sing1.53Å1.50Å
C30C25sing1.54Å1.50Å
C40C39doub1.38Å1.40ÅAromatic
C40N52sing1.32Å1.33ÅAromatic
C39C38sing1.40Å1.40ÅAromatic
C27C23sing1.48Å1.45Å
C27C26sing1.50Å1.50Å
C1C22sing1.51Å1.48Å
C1O2sing1.43Å1.43Å
C23C22sing1.39Å1.39ÅAromatic
C23C21doub1.37Å1.45ÅAromatic
N52C41doub1.32Å1.35ÅAromatic
C25C26sing1.53Å1.52Å
C22C20doub1.33Å1.46ÅAromatic
C38C21sing1.47Å1.47Å
C38C42doub1.40Å1.37ÅAromatic
C21S35sing1.76Å1.70ÅAromatic
C20S35sing1.76Å1.73ÅAromatic
C20C36sing1.51Å1.49Å
O2C6sing1.43Å1.44Å
C41C42sing1.38Å1.40ÅAromatic
C9C6sing1.53Å1.56Å
C6C7sing1.53Å1.52Å
C6C8sing1.53Å1.51Å
C7H1sing1.09Å1.10Å
C7H2sing1.09Å1.10Å
C7H3sing1.09Å1.10Å
C8H4sing1.09Å1.10Å
C8H5sing1.09Å1.10Å
C8H6sing1.09Å1.10Å
C9H7sing1.09Å1.10Å
C9H8sing1.09Å1.10Å
C9H9sing1.09Å1.10Å
C1H10sing1.09Å1.10Å
O5H11sing0.97Å0.95Å
C26H12sing1.09Å1.10Å
C26H13sing1.09Å1.10Å
C28H14sing1.08Å1.08Å
C29H15sing1.09Å1.10Å
C29H16sing1.09Å1.10Å
C51H17sing1.09Å1.10Å
C51H18sing1.09Å1.10Å
C51H19sing1.09Å1.10Å
C25H20sing1.09Å1.10Å
C25H21sing1.09Å1.10Å
C24H22sing1.09Å1.10Å
C24H23sing1.09Å1.10Å
C24H24sing1.09Å1.10Å
C36H25sing1.09Å1.10Å
C36H26sing1.09Å1.10Å
C36H27sing1.09Å1.10Å
C42H28sing1.08Å1.08Å
C41H29sing1.08Å1.08Å
C40H30sing1.08Å1.08Å
C39H31sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O4C3O5119.6°120.0°
O4C3C1122.3°120.0°
C28C29C30113.9°110.2°
C29C28C27122.9°123.8°
C29C28H14118.6°118.1°
C28C29H15108.3°109.4°
C28C29H16108.3°109.4°
C29C30C51109.1°109.6°
C29C30C24109.4°109.6°
C29C30C25112.9°108.3°
C30C29H15108.4°109.3°
C30C29H16108.4°109.3°
O5C3C1118.0°120.0°
C3O5H11109.5°117.0°
C28C27C23120.8°118.1°
C28C27C26123.6°123.8°
C27C28H14118.5°118.1°
C51C30C24106.7°109.7°
C51C30C25113.2°109.7°
C30C51H17109.5°109.5°
C30C51H18109.5°109.4°
C30C51H19109.5°109.5°
C3C1C22106.9°109.4°
C3C1O2107.7°109.5°
C3C1H10109.0°109.5°
C24C30C25105.2°109.8°
C30C24H22109.5°109.5°
C30C24H23109.5°109.5°
C30C24H24109.5°109.4°
C30C25C26114.0°108.5°
C30C25H20108.3°109.6°
C30C25H21108.3°109.7°
C39C40N52119.6°120.9°
C40C39C38121.5°119.0°
C39C40H30120.2°119.6°
C40C39H31119.2°120.5°
C40N52C41118.7°122.0°
N52C40H30120.2°119.5°
C39C38C21120.4°120.9°
C39C38C42118.1°118.2°
C38C39H31119.2°120.5°
C23C27C26115.7°118.1°
C27C23C22122.4°123.1°
C27C23C21120.0°123.0°
C27C26C25112.5°110.1°
C27C26H12108.7°109.3°
C27C26H13108.7°109.4°
C22C1O2113.6°109.5°
C1C22C23124.2°122.4°
C1C22C20125.4°122.4°
C22C1H10109.4°109.5°
C1O2C6116.9°114.0°
O2C1H10110.0°109.4°
C22C23C21117.5°113.9°
C23C22C20110.1°115.2°
C23C21C38132.2°125.4°
C23C21S35106.4°109.3°
N52C41C42124.5°121.0°
N52C41H29117.7°119.5°
C25C26H12108.7°109.4°
C25C26H13108.7°109.3°
C26C25H20108.3°109.5°
C26C25H21108.3°109.7°
C22C20S35109.0°110.4°
C22C20C36132.2°124.9°
C21C38C42121.4°120.9°
C38C21S35121.3°125.4°
C38C42C41117.4°118.9°
C38C42H28121.3°120.5°
C21S35C2096.6°91.3°
S35C20C36118.5°124.8°
C20C36H25109.5°109.4°
C20C36H26109.5°109.5°
C20C36H27109.5°109.4°
O2C6C9113.3°109.5°
O2C6C7104.0°109.5°
O2C6C8110.9°109.4°
C41C42H28121.3°120.5°
C42C41H29117.8°119.5°
C9C6C7114.8°109.5°
C9C6C8107.2°109.5°
C6C9H7109.5°109.4°
C6C9H8109.5°109.5°
C6C9H9109.5°109.5°
C7C6C8106.4°109.5°
C6C7H1109.5°109.5°
C6C7H2109.4°109.5°
C6C7H3109.5°109.5°
C6C8H4109.5°109.4°
C6C8H5109.5°109.5°
C6C8H6109.5°109.4°
H1C7H2109.5°109.4°
H1C7H3109.5°109.4°
H2C7H3109.4°109.5°
H4C8H5109.5°109.5°
H4C8H6109.5°109.5°
H5C8H6109.5°109.5°
H7C9H8109.5°109.5°
H7C9H9109.5°109.5°
H8C9H9109.4°109.5°
H12C26H13109.4°109.3°
H15C29H16109.5°109.2°
H17C51H18109.4°109.5°
H17C51H19109.5°109.4°
H18C51H19109.5°109.4°
H20C25H21109.5°109.8°
H22C24H23109.5°109.5°
H22C24H24109.5°109.5°
H23C24H24109.4°109.5°
H25C36H26109.5°109.5°
H25C36H27109.5°109.5°
H26C36H27109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O4C3O5C1176.2°180.0°
O4C3C1C2229.2°115.0°
O4C3C1O2151.6°5.0°
O4C3C1H1089.0°125.0°
O4C3O5H110.0°0.1°
C28C29C30H15120.6°120.2°
C28C29C30H16120.6°120.2°
C29C28C27H14180.0°180.0°
C28C29C30C51164.5°169.6°
C28C29C30C2479.1°70.0°
C28C29C30C2537.7°49.9°
C29C28C27C23175.6°179.6°
C29C28C27C264.0°0.1°
C28C29H15H16117.9°119.7°
C30C29C28C279.7°17.1°
C29C30C51C24118.1°120.4°
C29C30C51C25126.7°118.9°
C29C30C24C25121.6°118.9°
C29C30C25C2653.5°68.1°
C30C29C28H14170.3°162.8°
C30C29H15H16118.0°119.6°
C29C30C51H17180.0°60.0°
C29C30C51H1860.0°180.0°
C29C30C51H1960.0°60.0°
C29C30C25H2067.1°172.4°
C29C30C25H21174.2°51.7°
C29C30C24H22180.0°54.1°
C29C30C24H2360.0°174.1°
C29C30C24H2460.0°65.9°
O5C3C1C22154.7°65.0°
O5C3C1O232.3°175.0°
O5C3C1H1087.1°55.0°
C28C27C23C26179.6°179.7°
C28C27C23C2276.9°85.4°
C28C27C23C21107.0°94.6°
C28C27C26C2510.8°16.8°
C28C27C26H12109.7°103.4°
C28C27C26H13131.3°136.9°
C27C28C29H15111.0°103.0°
C27C28C29H16130.4°137.4°
C51C30C24C25120.5°120.7°
C51C30C25C26178.1°172.2°
C51C30C29H1543.8°49.4°
C51C30C29H1674.9°70.2°
C30C51H17H18120.0°120.0°
C30C51H17H19120.0°120.1°
C30C51H18H19120.0°120.0°
C51C30C25H2057.4°52.7°
C51C30C25H2161.2°68.0°
C51C30C24H2262.1°174.5°
C51C30C24H2357.9°65.5°
C51C30C24H24177.8°54.5°
C3C1C22O2118.7°120.0°
C3C1C22H10117.9°120.0°
C3C1O2H10118.7°120.0°
C3C1C22C2398.7°105.3°
C3C1C22C2074.0°75.1°
C3C1O2C6161.3°90.0°
C1C3O5H11176.2°180.0°
C24C30C25C2665.7°51.6°
C24C30C29H15160.2°169.8°
C24C30C29H1641.5°50.3°
C24C30C51H1762.0°60.4°
C24C30C51H18178.1°59.6°
C24C30C51H1958.1°179.6°
C24C30C25H20173.6°67.9°
C24C30C25H2154.9°171.4°
C30C24H22H23120.0°120.0°
C30C24H22H24120.0°120.0°
C30C24H23H24120.0°120.0°
C30C25C26C2739.2°49.6°
C30C25C26H20120.7°119.6°
C30C25C26H21120.7°119.8°
C30C25C26H1281.3°70.5°
C30C25C26H13159.7°169.8°
C25C30C29H1583.0°70.3°
C25C30C29H16158.3°170.1°
C25C30C51H1753.3°178.9°
C25C30C51H1866.7°61.1°
C25C30C51H19173.3°58.9°
C30C25H20H21117.9°120.6°
C25C30C24H2258.4°64.9°
C25C30C24H23178.4°55.2°
C25C30C24H2461.6°175.2°
C39C40N52H30180.0°179.5°
C40C39C38H31180.0°179.5°
C39C40N52C411.9°0.2°
C40C39C38C21179.0°179.7°
C40C39C38C421.7°0.5°
N52C40C39C380.1°0.5°
C40N52C41C422.6°0.1°
C40N52C41H29177.4°180.0°
N52C40C39H31179.8°180.0°
C39C38C21C2331.0°48.3°
C39C38C21C42177.3°179.8°
C39C38C21S35150.7°131.6°
C39C38C42C411.0°0.2°
C39C38C42H28179.0°179.8°
C38C39C40H30179.9°180.0°
C27C23C22C15.9°0.0°
C27C23C22C21176.1°180.0°
C23C27C26C25169.6°162.8°
C27C23C22C20179.5°179.7°
C27C23C21C381.4°0.1°
C27C23C21S35177.1°180.0°
C23C27C26H1269.9°77.0°
C23C27C26H1349.2°42.7°
C23C27C28H144.4°0.4°
C26C27C23C22102.6°94.9°
C26C27C23C2173.4°85.1°
C27C26C25H12120.5°120.2°
C27C26C25H13120.5°120.2°
C27C26H12H13118.6°119.7°
C26C27C28H14176.0°179.9°
C27C26C25H2081.4°169.3°
C27C26C25H21159.9°70.1°
C22C1O2H10123.1°120.0°
C1C22C23C20173.6°179.7°
C1C22C23C21178.0°180.0°
C1C22C20S35179.2°179.9°
C1C22C20C366.4°0.0°
C22C1O2C680.5°150.0°
O2C1C22C23142.6°134.7°
O2C1C22C2044.7°45.0°
C1O2C6C950.0°180.0°
C1O2C6C7175.4°60.0°
C1O2C6C870.6°60.0°
C22C23C21C38177.6°179.9°
C22C23C21S350.9°0.0°
C23C22C20S355.7°0.5°
C23C22C20C36179.9°179.7°
C23C22C1H1019.2°14.7°
C21C23C22C204.4°0.3°
C23C21C38S35178.3°179.9°
C23C21C38C42151.7°131.9°
C23C21S35C202.3°0.2°
N52C41C42C381.1°0.1°
N52C41C42H29180.0°180.0°
N52C41C42H28178.9°179.9°
C41N52C40H30178.1°179.7°
C25C26H12H13118.6°119.6°
C26C25H20H21117.9°120.5°
C22C20S35C214.7°0.4°
C22C20S35C36175.3°179.9°
C20C22C1H10168.1°164.9°
C22C20C36H25174.0°90.0°
C22C20C36H2654.0°150.0°
C22C20C36H2766.0°30.0°
C38C21S35C20179.0°179.9°
C21C38C42C41178.4°180.0°
C21C38C42H281.6°0.0°
C21C38C39H310.9°0.2°
C42C38C21S3526.6°48.2°
C38C42C41H28180.0°180.0°
C38C42C41H29178.9°180.0°
C42C38C39H31178.3°180.0°
C21S35C20C36180.0°179.8°
S35C20C36H250.0°89.9°
S35C20C36H26120.0°30.1°
S35C20C36H27120.0°150.1°
C20C36H25H26120.0°120.0°
C20C36H25H27120.0°120.0°
C20C36H26H27120.0°120.0°
O2C6C9C7119.3°120.0°
O2C6C9C8122.7°120.0°
O2C6C7C8117.2°120.0°
O2C6C7H1180.0°60.0°
O2C6C7H260.0°60.0°
O2C6C7H360.0°180.0°
O2C6C8H4180.0°180.0°
O2C6C8H560.0°60.0°
O2C6C8H660.0°60.0°
O2C6C9H7180.0°60.0°
O2C6C9H860.0°60.0°
O2C6C9H960.0°180.0°
C6O2C1H1042.6°30.0°
C9C6C7C8118.4°120.0°
C9C6C7H155.6°180.0°
C9C6C7H264.4°60.0°
C9C6C7H3175.6°60.0°
C9C6C8H455.8°60.0°
C9C6C8H5175.8°60.0°
C9C6C8H664.2°180.0°
C6C9H7H8120.0°120.0°
C6C9H7H9120.0°120.0°
C6C9H8H9120.0°120.0°
C6C7H1H2120.0°120.0°
C6C7H1H3120.0°120.0°
C6C7H2H3120.0°120.1°
C7C6C8H467.5°60.0°
C7C6C8H552.5°180.0°
C7C6C8H6172.4°60.0°
C7C6C9H760.7°60.0°
C7C6C9H8179.3°180.0°
C7C6C9H959.3°60.0°
C8C6C7H162.8°60.0°
C8C6C7H2177.1°180.0°
C8C6C7H357.2°60.0°
C6C8H4H5120.0°120.0°
C6C8H4H6120.0°119.9°
C6C8H5H6120.0°120.0°
C8C6C9H757.3°180.0°
C8C6C9H862.7°60.0°
C8C6C9H9177.3°60.0°
H1C7H2H3120.0°119.9°
H4C8H5H6120.0°120.1°
H7C9H8H9120.0°120.0°
H12C26C25H20158.1°49.1°
H12C26C25H2139.4°169.7°
H13C26C25H2039.0°70.5°
H13C26C25H2179.7°50.1°
H14C28C29H1569.0°77.0°
H14C28C29H1649.6°42.6°
H17C51H18H19120.0°119.9°
H22C24H23H24120.0°120.0°
H25C36H26H27120.0°120.1°
H28C42C41H291.1°0.0°
H30C40C39H310.2°0.5°

222415

PDB entries from 2024-07-10

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