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9VK

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O5C3doub1.21Å1.31Å
C24C25sing1.53Å1.53Å
C24C29sing1.53Å1.51Å
C25C26sing1.50Å1.51Å
O4C3sing1.34Å1.22Å
C54C29sing1.53Å1.52Å
C3C1sing1.51Å1.51Å
C29C53sing1.53Å1.52Å
C29C28sing1.53Å1.51Å
C39C38doub1.38Å1.39ÅAromatic
C39C35sing1.40Å1.41ÅAromatic
C38C37sing1.39Å1.39ÅAromatic
C26C23sing1.48Å1.48Å
C26C27doub1.31Å1.35Å
C1C22sing1.51Å1.45Å
C1O2sing1.43Å1.43Å
C28C27sing1.50Å1.52Å
C23C22sing1.39Å1.48ÅAromatic
C23C21doub1.37Å1.46ÅAromatic
C22C20doub1.33Å1.50ÅAromatic
C21C35sing1.47Å1.46Å
C21S43sing1.76Å1.75ÅAromatic
C35N36doub1.33Å1.34ÅAromatic
C20C34sing1.51Å1.51Å
C20S43sing1.76Å1.73ÅAromatic
C37C40doub1.38Å1.41ÅAromatic
O2C6sing1.43Å1.42Å
N36C40sing1.32Å1.34ÅAromatic
C7C6sing1.53Å1.52Å
C6C9sing1.53Å1.52Å
C6C8sing1.53Å1.54Å
O4H1sing0.97Å0.95Å
C1H2sing1.09Å1.10Å
C9H3sing1.09Å1.10Å
C9H4sing1.09Å1.10Å
C9H5sing1.09Å1.10Å
C8H6sing1.09Å1.10Å
C8H7sing1.09Å1.10Å
C8H8sing1.09Å1.10Å
C7H9sing1.09Å1.10Å
C7H10sing1.09Å1.10Å
C7H11sing1.09Å1.10Å
C25H12sing1.09Å1.10Å
C25H13sing1.09Å1.10Å
C27H14sing1.08Å1.08Å
C28H15sing1.09Å1.10Å
C28H16sing1.09Å1.10Å
C54H17sing1.09Å1.10Å
C54H18sing1.09Å1.10Å
C54H19sing1.09Å1.10Å
C53H20sing1.09Å1.10Å
C53H21sing1.09Å1.10Å
C53H22sing1.09Å1.10Å
C24H23sing1.09Å1.10Å
C24H24sing1.09Å1.10Å
C34H25sing1.09Å1.10Å
C34H26sing1.09Å1.10Å
C34H27sing1.09Å1.10Å
C39H28sing1.08Å1.08Å
C38H29sing1.08Å1.08Å
C37H30sing1.08Å1.08Å
C40H31sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O5C3O4118.6°120.0°
O5C3C1120.1°120.0°
C25C24C29115.7°108.5°
C24C25C26115.5°110.2°
C24C25H12107.9°109.3°
C24C25H13108.0°109.3°
C25C24H23107.9°109.7°
C25C24H24107.9°109.6°
C24C29C54109.7°109.9°
C24C29C53108.9°109.6°
C24C29C28114.7°108.4°
C29C24H23107.9°109.7°
C29C24H24107.9°109.5°
C25C26C23118.2°118.1°
C25C26C27120.5°123.9°
C26C25H12108.0°109.3°
C26C25H13107.9°109.3°
O4C3C1121.2°120.0°
C3O4H1109.5°117.0°
C54C29C53108.6°109.7°
C54C29C28109.9°109.6°
C29C54H17109.5°109.4°
C29C54H18109.5°109.5°
C29C54H19109.5°109.4°
C3C1C22110.3°109.4°
C3C1O2107.1°109.5°
C3C1H2109.2°109.5°
C53C29C28104.7°109.6°
C29C53H20109.5°109.5°
C29C53H21109.5°109.4°
C29C53H22109.5°109.5°
C29C28C27110.8°110.2°
C29C28H15109.1°109.4°
C29C28H16109.1°109.2°
C38C39C35120.3°119.1°
C39C38C37116.7°118.5°
C38C39H28119.9°120.5°
C39C38H29121.6°120.8°
C39C35C21122.3°119.8°
C39C35N36122.4°120.4°
C35C39H28119.9°120.4°
C38C37C40119.7°119.5°
C37C38H29121.7°120.7°
C38C37H30120.1°120.3°
C23C26C27121.2°118.0°
C26C23C22127.5°123.0°
C26C23C21120.9°123.1°
C26C27C28117.9°123.8°
C26C27H14121.0°118.2°
C22C1O2110.2°109.5°
C1C22C23124.8°122.4°
C1C22C20123.7°122.4°
C22C1H2110.0°109.5°
C1O2C6117.9°114.0°
O2C1H2110.2°109.5°
C28C27H14121.1°118.1°
C27C28H15109.2°109.4°
C27C28H16109.1°109.3°
C22C23C21111.5°113.9°
C23C22C20111.5°115.2°
C23C21C35132.7°125.4°
C23C21S43111.5°109.3°
C22C20C34134.4°124.8°
C22C20S43110.4°110.4°
C35C21S43115.8°125.3°
C21C35N36115.2°119.8°
C21S43C2095.0°91.3°
C35N36C40118.0°121.6°
C34C20S43115.1°124.8°
C20C34H25109.5°109.5°
C20C34H26109.5°109.5°
C20C34H27109.5°109.5°
C37C40N36122.9°120.9°
C40C37H30120.2°120.2°
C37C40H31118.6°119.6°
O2C6C7111.8°109.5°
O2C6C9110.7°109.5°
O2C6C8104.4°109.5°
N36C40H31118.5°119.5°
C7C6C9108.8°109.5°
C7C6C8112.2°109.5°
C6C7H9109.5°109.5°
C6C7H10109.5°109.5°
C6C7H11109.5°109.4°
C9C6C8108.9°109.5°
C6C9H3109.5°109.5°
C6C9H4109.4°109.5°
C6C9H5109.4°109.4°
C6C8H6109.5°109.5°
C6C8H7109.4°109.4°
C6C8H8109.4°109.5°
H3C9H4109.5°109.5°
H3C9H5109.5°109.5°
H4C9H5109.5°109.4°
H6C8H7109.5°109.5°
H6C8H8109.5°109.4°
H7C8H8109.5°109.5°
H9C7H10109.4°109.5°
H9C7H11109.5°109.4°
H10C7H11109.5°109.4°
H12C25H13109.5°109.4°
H15C28H16109.5°109.4°
H17C54H18109.5°109.5°
H17C54H19109.4°109.5°
H18C54H19109.4°109.6°
H20C53H21109.5°109.5°
H20C53H22109.5°109.5°
H21C53H22109.4°109.4°
H23C24H24109.5°109.8°
H25C34H26109.5°109.4°
H25C34H27109.4°109.5°
H26C34H27109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O5C3O4C1178.8°179.9°
O5C3C1C2228.0°115.0°
O5C3C1O2147.9°5.0°
O5C3O4H10.0°0.1°
O5C3C1H292.9°125.0°
C25C24C29H23120.9°119.8°
C25C24C29H24120.9°119.6°
C24C25C26H12120.9°120.1°
C24C25C26H13120.9°120.1°
C25C24C29C54140.4°51.8°
C25C24C29C53100.9°172.4°
C25C24C29C2816.0°68.0°
C24C25C26C23155.9°162.9°
C24C25C26C2727.3°16.9°
C24C25H12H13117.3°119.6°
C25C24H23H24117.2°120.5°
C29C24C25C2622.2°49.6°
C24C29C54C53119.0°120.6°
C24C29C54C28127.1°119.0°
C24C29C53C28123.2°118.8°
C24C29C28C2749.8°49.9°
C29C24C25H12143.1°70.5°
C29C24C25H1398.6°169.8°
C24C29C28H1570.4°70.4°
C24C29C28H16170.0°170.0°
C24C29C54H17180.0°179.5°
C24C29C54H1860.0°59.5°
C24C29C54H1960.0°60.6°
C24C29C53H20180.0°178.9°
C24C29C53H2160.0°61.2°
C24C29C53H2260.0°58.8°
C29C24H23H24117.2°120.5°
C25C26C23C27176.8°179.8°
C25C26C27C288.2°0.2°
C25C26C23C2273.0°89.7°
C25C26C23C21108.0°90.3°
C26C25H12H13117.2°119.7°
C25C26C27H14171.8°179.8°
C26C25C24H23143.1°169.4°
C26C25C24H2498.7°70.0°
O4C3C1C22153.3°65.0°
O4C3C1O233.4°175.0°
O4C3C1H285.8°54.9°
C54C29C53C28117.4°120.4°
C54C29C28C27174.0°70.1°
C54C29C28H1553.8°169.6°
C54C29C28H1665.8°50.0°
C29C54H17H18120.0°120.0°
C29C54H17H19120.0°119.9°
C29C54H18H19120.0°120.0°
C54C29C53H2060.5°60.4°
C54C29C53H2159.5°59.6°
C54C29C53H22179.4°179.6°
C54C29C24H2319.5°68.0°
C54C29C24H2498.7°171.4°
C3C1C22O2118.0°120.0°
C3C1C22H2120.4°120.0°
C3C1O2H2118.6°120.0°
C3C1C22C23106.3°105.3°
C3C1C22C2073.4°75.1°
C3C1O2C6166.6°90.0°
C1C3O4H1178.8°180.0°
C53C29C28C2769.6°169.4°
C53C29C28H15170.2°49.2°
C53C29C28H1650.6°70.5°
C53C29C54H1761.0°60.0°
C53C29C54H18179.0°179.9°
C53C29C54H1959.0°60.0°
C29C53H20H21120.0°119.9°
C29C53H20H22120.0°120.1°
C29C53H21H22120.0°120.0°
C53C29C24H23138.2°52.6°
C53C29C24H2420.0°68.0°
C29C28C27C2647.2°17.2°
C29C28C27H15120.2°120.2°
C29C28C27H16120.2°120.0°
C29C28C27H14132.8°162.8°
C29C28H15H16119.4°119.5°
C28C29C54H1752.9°60.5°
C28C29C54H1867.1°59.5°
C28C29C54H19173.0°179.6°
C28C29C53H2056.8°60.0°
C28C29C53H21176.8°180.0°
C28C29C53H2263.2°60.0°
C28C29C24H23104.8°172.2°
C28C29C24H24137.0°51.6°
C38C39C35H28180.0°179.9°
C39C38C37H29180.0°179.9°
C38C39C35C21177.8°180.0°
C38C39C35N362.2°0.4°
C39C38C37C401.2°0.1°
C39C38C37H30178.8°180.0°
C35C39C38C370.3°0.0°
C39C35C21C2334.1°179.7°
C39C35C21N36175.8°179.6°
C39C35C21S43146.1°0.3°
C39C35N36C403.7°0.6°
C35C39C38H29179.7°179.9°
C38C37C40H30180.0°180.0°
C38C37C40N360.3°0.2°
C37C38C39H28179.7°179.9°
C38C37C40H31179.7°180.0°
C26C23C22C11.1°0.1°
C23C26C27C28168.5°179.6°
C26C23C22C21179.1°180.0°
C26C23C22C20179.2°179.7°
C26C23C21C351.5°0.0°
C26C23C21S43178.3°180.0°
C23C26C25H1235.0°77.0°
C23C26C25H1383.2°42.8°
C23C26C27H1411.5°0.4°
C26C27C28H14180.0°180.0°
C27C26C23C22110.3°90.1°
C27C26C23C2168.8°89.9°
C27C26C25H12148.2°103.3°
C27C26C25H1393.6°137.0°
C26C27C28H1573.0°103.0°
C26C27C28H16167.4°137.3°
C22C1O2H2121.5°120.0°
C1C22C23C20179.7°179.6°
C1C22C23C21179.8°179.9°
C1C22C20C340.1°0.1°
C1C22C20S43179.2°179.9°
C22C1O2C673.5°150.0°
O2C1C22C23135.8°134.7°
O2C1C22C2044.6°44.9°
C1O2C6C751.3°59.9°
C1O2C6C970.2°60.0°
C1O2C6C8172.8°180.0°
C27C28H15H16119.4°119.7°
C22C23C21C35179.3°180.0°
C22C23C21S430.9°0.0°
C23C22C20C34179.6°179.7°
C23C22C20S431.0°0.4°
C23C22C1H214.2°14.7°
C21C23C22C200.1°0.3°
C23C21C35S43179.8°180.0°
C23C21C35N36150.1°0.1°
C23C21S43C201.3°0.2°
C22C20S43C211.3°0.3°
C22C20C34S43179.3°179.8°
C20C22C1H2166.2°164.9°
C22C20C34H25179.3°90.0°
C22C20C34H2659.3°150.1°
C22C20C34H2760.7°30.1°
C35C21S43C20178.9°179.8°
C21C35N36C40179.5°179.7°
C21C35C39H282.3°0.1°
S43C21C35N3629.7°180.0°
C21S43C20C34179.2°179.8°
C35N36C40C372.8°0.6°
N36C35C39H28177.8°179.7°
C35N36C40H31177.2°179.7°
C20C34H25H26120.0°120.0°
C20C34H25H27120.0°120.1°
C20C34H26H27120.0°120.0°
S43C20C34H250.0°89.8°
S43C20C34H26120.0°30.1°
S43C20C34H27120.0°150.1°
C37C40N36H31180.0°179.8°
C40C37C38H29178.8°180.0°
O2C6C7C9122.5°120.0°
O2C6C7C8116.9°120.0°
O2C6C9C8114.2°120.0°
C6O2C1H248.0°30.0°
O2C6C9H3180.0°60.0°
O2C6C9H460.0°179.9°
O2C6C9H560.0°60.0°
O2C6C8H6180.0°60.0°
O2C6C8H760.0°180.0°
O2C6C8H860.0°60.0°
O2C6C7H9180.0°59.9°
O2C6C7H1060.0°180.0°
O2C6C7H1160.0°60.0°
N36C40C37H30179.7°179.7°
C7C6C9C8122.6°120.0°
C7C6C9H356.8°180.0°
C7C6C9H4176.8°60.0°
C7C6C9H563.2°60.0°
C7C6C8H658.8°60.0°
C7C6C8H761.3°60.0°
C7C6C8H8178.7°180.0°
C6C7H9H10120.0°120.1°
C6C7H9H11120.0°120.0°
C6C7H10H11120.0°119.9°
C6C9H3H4120.0°120.0°
C6C9H3H5120.0°120.0°
C6C9H4H5120.0°119.9°
C9C6C8H661.8°180.0°
C9C6C8H7178.2°60.0°
C9C6C8H858.2°60.0°
C9C6C7H957.5°60.0°
C9C6C7H1062.5°60.1°
C9C6C7H11177.5°180.0°
C8C6C9H365.8°60.0°
C8C6C9H454.2°60.1°
C8C6C9H5174.2°180.0°
C6C8H6H7120.0°120.0°
C6C8H6H8120.0°120.0°
C6C8H7H8120.0°120.0°
C8C6C7H963.1°180.0°
C8C6C7H10176.9°59.9°
C8C6C7H1156.9°60.0°
H3C9H4H5120.0°120.0°
H6C8H7H8120.0°120.0°
H9C7H10H11120.0°120.0°
H12C25C24H2396.0°49.3°
H12C25C24H2422.2°169.9°
H13C25C24H2322.2°70.4°
H13C25C24H24140.4°50.2°
H14C27C28H15107.0°77.0°
H14C27C28H1612.6°42.8°
H17C54H18H19120.0°120.0°
H20C53H21H22120.0°120.0°
H25C34H26H27120.0°120.0°
H28C39C38H290.3°0.0°
H29C38C37H301.2°0.0°
H30C37C40H310.4°0.0°

222415

PDB entries from 2024-07-10

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