9R1
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O | C | doub | 1.21Å | 1.23Å | |
C | CA | sing | 1.51Å | 1.53Å | |
N | CA | sing | 1.47Å | 1.45Å | |
CA | CB | sing | 1.53Å | 1.51Å | |
CB | CG | sing | 1.53Å | 1.52Å | |
CG | CD | sing | 1.53Å | 1.51Å | |
CD | CE | sing | 1.53Å | 1.52Å | |
CE | CZ | sing | 1.53Å | 1.50Å | |
ON1 | CN | doub | 1.21Å | 1.25Å | |
CZ | CN | sing | 1.51Å | 1.51Å | |
CN | ON2 | sing | 1.34Å | 1.25Å | |
C | OXT | sing | 1.34Å | 1.32Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
CB | H5 | sing | 1.09Å | 1.10Å | |
CB | H6 | sing | 1.09Å | 1.10Å | |
CG | H7 | sing | 1.09Å | 1.10Å | |
CG | H8 | sing | 1.09Å | 1.10Å | |
CD | H9 | sing | 1.09Å | 1.10Å | |
CD | H10 | sing | 1.09Å | 1.10Å | |
CE | H11 | sing | 1.09Å | 1.10Å | |
CE | H12 | sing | 1.09Å | 1.10Å | |
CZ | H13 | sing | 1.09Å | 1.10Å | |
CZ | H14 | sing | 1.09Å | 1.10Å | |
ON2 | H15 | sing | 0.97Å | 0.95Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O | C | CA | 121.9° | 120.0° |
O | C | OXT | 122.2° | 120.0° |
C | CA | N | 113.9° | 109.5° |
C | CA | CB | 109.5° | 109.4° |
CA | C | OXT | 115.8° | 120.0° |
C | CA | HA | 107.4° | 109.5° |
N | CA | CB | 109.8° | 109.5° |
CA | N | H | 109.5° | 111.0° |
CA | N | H2 | 109.5° | 111.0° |
N | CA | HA | 108.4° | 109.5° |
CA | CB | CG | 110.6° | 109.5° |
CB | CA | HA | 107.6° | 109.5° |
CA | CB | H5 | 109.2° | 109.5° |
CA | CB | H6 | 109.2° | 109.4° |
CB | CG | CD | 114.8° | 109.4° |
CG | CB | H5 | 109.2° | 109.5° |
CG | CB | H6 | 109.2° | 109.5° |
CB | CG | H7 | 108.1° | 109.5° |
CB | CG | H8 | 108.1° | 109.5° |
CG | CD | CE | 110.7° | 109.5° |
CD | CG | H7 | 108.1° | 109.5° |
CD | CG | H8 | 108.1° | 109.4° |
CG | CD | H9 | 109.1° | 109.5° |
CG | CD | H10 | 109.2° | 109.5° |
CD | CE | CZ | 109.8° | 109.5° |
CE | CD | H9 | 109.2° | 109.4° |
CE | CD | H10 | 109.2° | 109.4° |
CD | CE | H11 | 109.4° | 109.5° |
CD | CE | H12 | 109.4° | 109.5° |
CE | CZ | CN | 112.7° | 109.5° |
CZ | CE | H11 | 109.4° | 109.5° |
CZ | CE | H12 | 109.4° | 109.5° |
CE | CZ | H13 | 108.6° | 109.5° |
CE | CZ | H14 | 108.6° | 109.5° |
ON1 | CN | CZ | 121.4° | 120.0° |
ON1 | CN | ON2 | 120.5° | 120.0° |
CZ | CN | ON2 | 118.1° | 120.0° |
CN | CZ | H13 | 108.7° | 109.5° |
CN | CZ | H14 | 108.6° | 109.4° |
CN | ON2 | H15 | 109.5° | 117.0° |
C | OXT | HXT | 109.5° | 117.0° |
H | N | H2 | 109.4° | 111.0° |
H5 | CB | H6 | 109.5° | 109.5° |
H7 | CG | H8 | 109.5° | 109.5° |
H9 | CD | H10 | 109.4° | 109.4° |
H11 | CE | H12 | 109.5° | 109.4° |
H13 | CZ | H14 | 109.5° | 109.4° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O | C | CA | OXT | 179.3° | 179.9° |
O | C | CA | N | 132.0° | 19.9° |
O | C | CA | CB | 104.6° | 100.1° |
O | C | CA | HA | 12.0° | 140.0° |
O | C | OXT | HXT | 0.0° | 0.1° |
C | CA | N | CB | 123.2° | 120.0° |
C | CA | N | HA | 119.5° | 120.0° |
C | CA | CB | HA | 116.5° | 120.0° |
C | CA | CB | CG | 61.6° | 175.0° |
C | CA | N | H | 180.0° | 64.0° |
C | CA | N | H2 | 60.0° | 60.0° |
C | CA | CB | H5 | 178.3° | 65.0° |
C | CA | CB | H6 | 58.6° | 55.0° |
CA | C | OXT | HXT | 179.3° | 180.0° |
N | CA | CB | HA | 117.8° | 120.0° |
N | CA | CB | CG | 172.7° | 65.0° |
N | CA | C | OXT | 48.7° | 160.0° |
CA | N | H | H2 | 120.0° | 123.9° |
N | CA | CB | H5 | 52.5° | 55.0° |
N | CA | CB | H6 | 67.2° | 175.0° |
CA | CB | CG | H5 | 120.2° | 120.0° |
CA | CB | CG | H6 | 120.2° | 119.9° |
CA | CB | CG | CD | 178.9° | 180.0° |
CB | CA | C | OXT | 74.7° | 80.1° |
CB | CA | N | H | 56.8° | 176.0° |
CB | CA | N | H2 | 176.8° | 60.0° |
CA | CB | H5 | H6 | 119.5° | 120.0° |
CA | CB | CG | H7 | 58.1° | 60.0° |
CA | CB | CG | H8 | 60.3° | 60.1° |
CB | CG | CD | H7 | 120.8° | 120.1° |
CB | CG | CD | H8 | 120.8° | 119.9° |
CB | CG | CD | CE | 60.8° | 180.0° |
CG | CB | CA | HA | 54.9° | 55.0° |
CG | CB | H5 | H6 | 119.4° | 120.0° |
CB | CG | H7 | H8 | 117.6° | 120.0° |
CB | CG | CD | H9 | 179.0° | 60.0° |
CB | CG | CD | H10 | 59.4° | 60.0° |
CG | CD | CE | H9 | 120.2° | 120.0° |
CG | CD | CE | H10 | 120.2° | 120.0° |
CG | CD | CE | CZ | 170.3° | 180.0° |
CD | CG | CB | H5 | 60.9° | 60.0° |
CD | CG | CB | H6 | 58.8° | 60.1° |
CD | CG | H7 | H8 | 117.5° | 120.0° |
CG | CD | H9 | H10 | 119.4° | 120.1° |
CG | CD | CE | H11 | 50.3° | 60.0° |
CG | CD | CE | H12 | 69.6° | 60.0° |
CD | CE | CZ | H11 | 120.0° | 120.0° |
CD | CE | CZ | H12 | 120.0° | 120.0° |
CD | CE | CZ | CN | 66.7° | 180.0° |
CE | CD | CG | H7 | 60.0° | 60.0° |
CE | CD | CG | H8 | 178.5° | 60.0° |
CE | CD | H9 | H10 | 119.4° | 119.9° |
CD | CE | H11 | H12 | 119.8° | 120.0° |
CD | CE | CZ | H13 | 53.8° | 60.0° |
CD | CE | CZ | H14 | 172.8° | 60.0° |
CE | CZ | CN | ON1 | 57.6° | 0.0° |
CE | CZ | CN | H13 | 120.5° | 120.0° |
CE | CZ | CN | H14 | 120.5° | 120.0° |
CE | CZ | CN | ON2 | 122.7° | 180.0° |
CZ | CE | CD | H9 | 69.5° | 60.0° |
CZ | CE | CD | H10 | 50.1° | 60.0° |
CZ | CE | H11 | H12 | 119.9° | 119.9° |
CE | CZ | H13 | H14 | 118.5° | 120.0° |
ON1 | CN | CZ | ON2 | 179.7° | 180.0° |
ON1 | CN | CZ | H13 | 178.1° | 120.0° |
ON1 | CN | CZ | H14 | 62.9° | 120.1° |
ON1 | CN | ON2 | H15 | 0.0° | 0.0° |
CN | CZ | CE | H11 | 173.3° | 59.9° |
CN | CZ | CE | H12 | 53.3° | 60.0° |
CN | CZ | H13 | H14 | 118.5° | 119.9° |
CZ | CN | ON2 | H15 | 179.7° | 179.9° |
ON2 | CN | CZ | H13 | 2.3° | 59.9° |
ON2 | CN | CZ | H14 | 116.8° | 60.0° |
OXT | C | CA | HA | 168.8° | 39.9° |
H | N | CA | HA | 60.5° | 56.1° |
H2 | N | CA | HA | 59.5° | 180.0° |
HA | CA | CB | H5 | 65.3° | 175.0° |
HA | CA | CB | H6 | 175.0° | 65.0° |
H5 | CB | CG | H7 | 178.3° | NaN° |
H5 | CB | CG | H8 | 59.9° | 60.0° |
H6 | CB | CG | H7 | 62.0° | 60.0° |
H6 | CB | CG | H8 | 179.5° | 180.0° |
H7 | CG | CD | H9 | 60.2° | 180.0° |
H7 | CG | CD | H10 | 179.8° | 60.0° |
H8 | CG | CD | H9 | 58.3° | 60.0° |
H8 | CG | CD | H10 | 61.3° | 180.0° |
H9 | CD | CE | H11 | 170.4° | 180.0° |
H9 | CD | CE | H12 | 50.5° | 60.1° |
H10 | CD | CE | H11 | 70.0° | 60.1° |
H10 | CD | CE | H12 | 170.1° | 180.0° |
H11 | CE | CZ | H13 | 66.2° | 180.0° |
H11 | CE | CZ | H14 | 52.8° | 60.0° |
H12 | CE | CZ | H13 | 173.8° | 60.0° |
H12 | CE | CZ | H14 | 67.1° | 180.0° |