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SummaryGeometryPCM/PTMRelated PDB entries

9Q8

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
O3C3trip1.22Å1.02Å
O1C1trip1.22Å1.03Å
C3RUsing1.86Å1.73Å
C1RUsing1.86Å1.82Å
O2C2trip1.22Å0.99Å
C2RUsing1.86Å1.75Å
RUO4sing2.11Å2.29Å
RUO5sing2.11Å2.33Å
RUO6sing2.11Å13.94Å
O5H1sing0.86Å0.95Å
O6H2sing0.86Å0.00Å
O4H3sing0.86Å0.95Å
H4O5sing0.86Å0.95Å
H5O6sing0.86Å0.00Å
H6O4sing0.86Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
O3C3RU176.1°180.0°
O1C1RU178.4°180.0°
C3RUC184.4°90.0°
C3RUC285.4°90.0°
C3RUO495.4°90.0°
C3RUO5178.3°180.0°
C3RUO6145.9°90.0°
C1RUC286.2°90.0°
C1RUO494.0°90.0°
C1RUO594.0°90.0°
C1RUO671.4°180.0°
O2C2RU177.3°180.0°
C2RUO4179.2°180.0°
C2RUO595.2°90.0°
C2RUO669.7°90.0°
O4RUO584.0°90.0°
O4RUO6109.6°90.0°
RUO4H3109.5°109.5°
RUO4H6109.5°109.5°
O5RUO633.5°90.0°
RUO5H1109.5°109.5°
RUO5H4109.5°109.4°
RUO6H290.0°109.5°
RUO6H590.0°109.4°
H1O5H4109.4°107.4°
H2O6H590.0°107.4°
H3O4H6109.5°107.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
O3C3RUC1116.0°11.8°
O3C3RUC2157.3°78.2°
O3C3RUO422.5°101.8°
O3C3RUO591.8°168.4°
O3C3RUO6160.4°168.2°
O1C1RUC381.1°151.1°
O1C1RUC24.6°118.9°
O1C1RUO4176.2°61.1°
O1C1RUO599.6°28.9°
O1C1RUO674.4°162.5°
C3RUC1C285.7°90.0°
C3RUC1O495.1°90.0°
C3RUC1O5179.3°180.0°
C3RUC1O6155.5°46.4°
C3RUC2O2105.4°55.6°
C3RUC2O4170.8°69.9°
C3RUC2O5178.4°180.0°
C3RUC2O6156.3°90.0°
C3RUO4O5178.4°180.0°
C3RUO4O6156.5°90.0°
C3RUO5O671.1°0.2°
C3RUO5H1180.0°127.0°
C3RUO6H290.0°46.3°
C3RUO4H3180.0°31.7°
C3RUO5H460.0°115.5°
C3RUO6H590.0°163.8°
C3RUO4H660.0°149.2°
C1RUC2O2169.8°34.4°
C1RUC2O4104.4°159.9°
C1RUC2O593.7°90.0°
C1RUC2O671.6°180.0°
C1RUO4O593.6°90.0°
C1RUO4O671.7°180.0°
C1RUO5O646.9°180.0°
C1RUO5H1155.8°52.8°
C1RUO6H290.0°92.7°
C1RUO4H395.2°58.3°
C1RUO5H484.2°64.7°
C1RUO6H590.0°149.8°
C1RUO4H6144.8°59.2°
O2C2RUO465.4°125.5°
O2C2RUO576.2°124.4°
O2C2RUO698.3°145.6°
C2RUO4O510.8°110.1°
C2RUO4O632.7°20.1°
C2RUO5O639.7°90.0°
C2RUO5H169.2°142.8°
C2RUO6H290.0°136.3°
C2RUO4H39.2°101.6°
C2RUO5H4170.8°25.3°
C2RUO6H590.0°106.2°
C2RUO4H6110.8°140.9°
O4RUO5O6140.5°90.0°
O4RUO5H1110.6°37.2°
O4RUO6H290.0°43.7°
RUO4H3H6120.0°118.8°
O4RUO5H49.4°154.7°
O4RUO6H590.0°73.8°
RUO5H1H4120.0°118.7°
O5RUO6H290.0°133.7°
O5RUO4H31.6°148.3°
O5RUO6H590.0°16.2°
O5RUO4H6121.6°30.9°
O6RUO5H1108.9°127.2°
RUO6H2H590.0°118.7°
O6RUO4H323.5°121.7°
O6RUO5H4131.1°115.3°
O6RUO4H6143.5°120.9°

258222

PDB entries from 2026-08-19

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