9L2
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O3' | C3' | sing | 1.43Å | 1.44Å | |
| O4' | C4' | sing | 1.43Å | 1.44Å | |
| C3' | C4' | sing | 1.53Å | 1.52Å | |
| C3' | C2' | sing | 1.53Å | 1.53Å | |
| C4' | C5' | sing | 1.53Å | 1.54Å | |
| N2' | C2' | sing | 1.47Å | 1.48Å | |
| C2' | C1' | sing | 1.53Å | 1.54Å | |
| O6' | C6' | sing | 1.43Å | 1.43Å | |
| C5' | C6' | sing | 1.53Å | 1.52Å | |
| C5' | O5' | sing | 1.43Å | 1.43Å | |
| C1' | O5' | sing | 1.43Å | 1.43Å | |
| C1' | C1 | sing | 1.51Å | 1.48Å | |
| N2 | C1 | sing | 1.35Å | 1.34Å | Aromatic |
| N2 | C3 | sing | 1.37Å | 1.35Å | Aromatic |
| C1 | N5 | doub | 1.30Å | 1.35Å | Aromatic |
| C3 | C4 | doub | 1.36Å | 1.38Å | Aromatic |
| N5 | C4 | sing | 1.35Å | 1.36Å | Aromatic |
| C4 | C6 | sing | 1.48Å | 1.49Å | |
| C6 | C7 | doub | 1.39Å | 1.40Å | Aromatic |
| C6 | C11 | sing | 1.39Å | 1.40Å | Aromatic |
| C7 | C8 | sing | 1.38Å | 1.39Å | Aromatic |
| C11 | C10 | doub | 1.38Å | 1.40Å | Aromatic |
| C8 | C9 | doub | 1.38Å | 1.39Å | Aromatic |
| C10 | C9 | sing | 1.38Å | 1.39Å | Aromatic |
| O6' | H1 | sing | 0.97Å | 0.95Å | |
| C6' | H2 | sing | 1.09Å | 1.10Å | |
| C6' | H3 | sing | 1.09Å | 1.10Å | |
| C5' | H4 | sing | 1.09Å | 1.10Å | |
| C4' | H5 | sing | 1.09Å | 1.10Å | |
| O4' | H6 | sing | 0.97Å | 0.95Å | |
| C3' | H7 | sing | 1.09Å | 1.10Å | |
| O3' | H8 | sing | 0.97Å | 0.95Å | |
| C1' | H9 | sing | 1.09Å | 1.10Å | |
| C2' | H10 | sing | 1.09Å | 1.10Å | |
| N2' | H11 | sing | 1.01Å | 1.00Å | |
| N2' | H12 | sing | 1.01Å | 1.00Å | |
| N2 | H14 | sing | 0.97Å | 1.00Å | |
| C3 | H15 | sing | 1.08Å | 1.08Å | |
| C7 | H17 | sing | 1.08Å | 1.08Å | |
| C8 | H18 | sing | 1.08Å | 1.08Å | |
| C9 | H19 | sing | 1.08Å | 1.08Å | |
| C10 | H20 | sing | 1.08Å | 1.08Å | |
| C11 | H21 | sing | 1.08Å | 1.08Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O3' | C3' | C4' | 108.1° | 109.5° |
| O3' | C3' | C2' | 111.7° | 109.5° |
| O3' | C3' | H7 | 109.5° | 109.6° |
| C3' | O3' | H8 | 109.5° | 114.0° |
| O4' | C4' | C3' | 110.2° | 109.6° |
| O4' | C4' | C5' | 109.4° | 109.5° |
| O4' | C4' | H5 | 109.4° | 109.5° |
| C4' | O4' | H6 | 109.5° | 114.0° |
| C4' | C3' | C2' | 110.9° | 109.0° |
| C3' | C4' | C5' | 111.3° | 109.2° |
| C3' | C4' | H5 | 108.4° | 109.6° |
| C4' | C3' | H7 | 108.4° | 109.6° |
| C3' | C2' | N2' | 111.0° | 109.5° |
| C3' | C2' | C1' | 110.3° | 109.1° |
| C2' | C3' | H7 | 108.2° | 109.6° |
| C3' | C2' | H10 | 108.4° | 109.6° |
| C4' | C5' | C6' | 110.9° | 109.5° |
| C4' | C5' | O5' | 111.4° | 109.4° |
| C4' | C5' | H4 | 107.7° | 109.5° |
| C5' | C4' | H5 | 108.1° | 109.5° |
| N2' | C2' | C1' | 109.6° | 109.5° |
| N2' | C2' | H10 | 109.1° | 109.6° |
| C2' | N2' | H11 | 109.5° | 111.0° |
| C2' | N2' | H12 | 109.5° | 111.0° |
| C2' | C1' | O5' | 108.8° | 109.4° |
| C2' | C1' | C1 | 112.8° | 109.5° |
| C2' | C1' | H9 | 108.6° | 109.6° |
| C1' | C2' | H10 | 108.3° | 109.6° |
| O6' | C6' | C5' | 112.2° | 109.5° |
| C6' | O6' | H1 | 109.5° | 114.0° |
| O6' | C6' | H2 | 108.8° | 109.5° |
| O6' | C6' | H3 | 108.8° | 109.5° |
| C6' | C5' | O5' | 109.8° | 109.5° |
| C5' | C6' | H2 | 108.8° | 109.4° |
| C5' | C6' | H3 | 108.8° | 109.5° |
| C6' | C5' | H4 | 108.0° | 109.4° |
| C5' | O5' | C1' | 112.3° | 114.1° |
| O5' | C5' | H4 | 109.1° | 109.5° |
| O5' | C1' | C1 | 107.0° | 109.5° |
| O5' | C1' | H9 | 110.1° | 109.5° |
| C1' | C1 | N2 | 125.8° | 125.5° |
| C1' | C1 | N5 | 126.0° | 125.5° |
| C1 | C1' | H9 | 109.5° | 109.5° |
| C1 | N2 | C3 | 109.4° | 107.4° |
| N2 | C1 | N5 | 108.2° | 109.0° |
| C1 | N2 | H14 | 125.3° | 126.3° |
| N2 | C3 | C4 | 106.7° | 106.7° |
| C3 | N2 | H14 | 125.3° | 126.3° |
| N2 | C3 | H15 | 126.7° | 126.7° |
| C1 | N5 | C4 | 107.9° | 109.2° |
| C3 | C4 | N5 | 107.8° | 107.7° |
| C3 | C4 | C6 | 126.6° | 126.2° |
| C4 | C3 | H15 | 126.7° | 126.7° |
| N5 | C4 | C6 | 125.6° | 126.1° |
| C4 | C6 | C7 | 121.4° | 120.2° |
| C4 | C6 | C11 | 119.2° | 120.1° |
| C7 | C6 | C11 | 119.5° | 119.8° |
| C6 | C7 | C8 | 119.5° | 119.9° |
| C6 | C7 | H17 | 120.3° | 120.0° |
| C6 | C11 | C10 | 120.7° | 119.9° |
| C6 | C11 | H21 | 119.7° | 120.1° |
| C7 | C8 | C9 | 120.9° | 120.1° |
| C8 | C7 | H17 | 120.3° | 120.1° |
| C7 | C8 | H18 | 119.5° | 119.9° |
| C11 | C10 | C9 | 119.6° | 120.1° |
| C11 | C10 | H20 | 120.2° | 119.9° |
| C10 | C11 | H21 | 119.6° | 120.0° |
| C8 | C9 | C10 | 119.8° | 120.3° |
| C9 | C8 | H18 | 119.5° | 119.9° |
| C8 | C9 | H19 | 120.1° | 119.9° |
| C10 | C9 | H19 | 120.1° | 119.8° |
| C9 | C10 | H20 | 120.2° | 120.0° |
| H2 | C6' | H3 | 109.5° | 109.4° |
| H11 | N2' | H12 | 109.4° | 111.1° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O3' | C3' | C4' | O4' | 67.0° | 63.2° |
| O3' | C3' | C4' | C2' | 122.7° | 119.8° |
| O3' | C3' | C4' | H7 | 118.6° | 120.3° |
| O3' | C3' | C2' | H7 | 120.6° | 120.2° |
| O3' | C3' | C4' | C5' | 171.5° | 176.8° |
| O3' | C3' | C2' | N2' | 65.3° | 63.3° |
| O3' | C3' | C2' | C1' | 173.0° | 176.9° |
| O3' | C3' | C4' | H5 | 52.7° | 56.9° |
| O3' | C3' | C2' | H10 | 54.5° | 57.0° |
| O4' | C4' | C3' | C5' | 121.5° | 120.0° |
| O4' | C4' | C3' | H5 | 119.7° | 120.2° |
| O4' | C4' | C3' | C2' | 170.3° | 176.9° |
| O4' | C4' | C5' | H5 | 119.1° | 120.1° |
| O4' | C4' | C5' | C6' | 63.1° | 62.4° |
| O4' | C4' | C5' | O5' | 174.4° | 177.6° |
| O4' | C4' | C5' | H4 | 54.9° | 57.6° |
| O4' | C4' | C3' | H7 | 51.6° | 57.0° |
| C4' | C3' | C2' | H7 | 118.8° | 119.9° |
| C3' | C4' | C5' | H5 | 119.0° | 119.9° |
| C4' | C3' | C2' | N2' | 174.1° | 176.9° |
| C4' | C3' | C2' | C1' | 52.4° | 57.1° |
| C3' | C4' | C5' | C6' | 174.9° | 177.6° |
| C3' | C4' | C5' | O5' | 52.4° | 57.6° |
| C3' | C4' | C5' | H4 | 67.1° | 62.4° |
| C3' | C4' | O4' | H6 | 180.0° | 179.7° |
| C4' | C3' | O3' | H8 | 180.0° | 60.0° |
| C4' | C3' | C2' | H10 | 66.1° | 62.9° |
| C2' | C3' | C4' | C5' | 48.8° | 57.0° |
| C3' | C2' | N2' | C1' | 122.1° | 119.6° |
| C3' | C2' | N2' | H10 | 119.4° | 120.2° |
| C3' | C2' | C1' | H10 | 118.5° | 120.0° |
| C3' | C2' | C1' | O5' | 58.8° | 57.7° |
| C3' | C2' | C1' | C1 | 177.3° | 177.6° |
| C2' | C3' | C4' | H5 | 70.0° | 62.9° |
| C2' | C3' | O3' | H8 | 57.8° | 179.5° |
| C3' | C2' | C1' | H9 | 61.1° | 62.4° |
| C3' | C2' | N2' | H11 | 180.0° | 60.1° |
| C3' | C2' | N2' | H12 | 60.0° | 63.9° |
| C4' | C5' | C6' | O6' | 51.9° | 175.0° |
| C4' | C5' | C6' | O5' | 123.5° | 120.0° |
| C4' | C5' | C6' | H4 | 117.8° | 120.0° |
| C4' | C5' | O5' | H4 | 118.7° | 120.0° |
| C4' | C5' | O5' | C1' | 61.0° | 61.1° |
| C4' | C5' | C6' | H2 | 68.5° | 64.9° |
| C4' | C5' | C6' | H3 | 172.3° | 55.0° |
| C5' | C4' | O4' | H6 | 57.4° | 60.0° |
| C5' | C4' | C3' | H7 | 69.9° | 62.9° |
| N2' | C2' | C1' | H10 | 118.9° | 120.2° |
| N2' | C2' | C1' | O5' | 178.7° | 177.5° |
| N2' | C2' | C1' | C1 | 60.2° | 62.6° |
| N2' | C2' | C3' | H7 | 55.3° | 57.0° |
| N2' | C2' | C1' | H9 | 61.4° | 57.5° |
| C2' | N2' | H11 | H12 | 120.0° | 124.0° |
| C2' | C1' | O5' | C5' | 63.8° | 61.2° |
| C2' | C1' | O5' | C1 | 122.1° | 119.9° |
| C2' | C1' | O5' | H9 | 119.0° | 120.1° |
| C2' | C1' | C1 | H9 | 121.1° | 120.1° |
| C2' | C1' | C1 | N2 | 43.3° | 125.4° |
| C2' | C1' | C1 | N5 | 138.3° | 54.9° |
| C1' | C2' | C3' | H7 | 66.4° | 62.9° |
| C1' | C2' | N2' | H11 | 57.9° | 179.7° |
| C1' | C2' | N2' | H12 | 177.9° | 55.7° |
| O6' | C6' | C5' | H2 | 120.4° | 120.0° |
| O6' | C6' | C5' | H3 | 120.4° | 120.0° |
| O6' | C6' | C5' | O5' | 71.6° | 65.0° |
| O6' | C6' | H2 | H3 | 118.8° | 120.0° |
| O6' | C6' | C5' | H4 | 169.7° | 55.0° |
| C6' | C5' | O5' | H4 | 118.1° | 120.0° |
| C6' | C5' | O5' | C1' | 175.8° | 178.8° |
| C5' | C6' | O6' | H1 | 180.0° | 180.0° |
| C5' | C6' | H2 | H3 | 118.7° | 120.0° |
| C6' | C5' | C4' | H5 | 56.0° | 57.7° |
| C5' | O5' | C1' | C1 | 174.1° | 178.9° |
| O5' | C5' | C6' | H2 | 168.0° | 55.1° |
| O5' | C5' | C6' | H3 | 48.8° | 175.0° |
| O5' | C5' | C4' | H5 | 66.5° | 62.3° |
| C5' | O5' | C1' | H9 | 55.1° | 58.9° |
| O5' | C1' | C1 | H9 | 119.4° | 120.0° |
| O5' | C1' | C1 | N2 | 76.2° | 114.7° |
| O5' | C1' | C1 | N5 | 102.2° | 64.9° |
| C1' | O5' | C5' | H4 | 57.7° | 58.8° |
| O5' | C1' | C2' | H10 | 59.8° | 62.3° |
| C1' | C1 | N2 | N5 | 178.6° | 179.7° |
| C1' | C1 | N2 | C3 | 178.8° | 180.0° |
| C1' | C1 | N5 | C4 | 178.3° | 179.9° |
| C1 | C1' | C2' | H10 | 58.7° | 57.6° |
| C1' | C1 | N2 | H14 | 1.2° | 0.1° |
| C1 | N2 | C3 | H14 | 180.0° | 179.9° |
| C1 | N2 | C3 | C4 | 0.6° | 0.0° |
| N2 | C1 | N5 | C4 | 0.3° | 0.4° |
| N2 | C1 | C1' | H9 | 164.4° | 5.3° |
| C1 | N2 | C3 | H15 | 179.3° | 180.0° |
| C3 | N2 | C1 | N5 | 0.2° | 0.3° |
| N2 | C3 | C4 | H15 | 180.0° | 180.0° |
| N2 | C3 | C4 | N5 | 0.8° | 0.2° |
| N2 | C3 | C4 | C6 | 179.5° | 180.0° |
| C1 | N5 | C4 | C3 | 0.7° | 0.4° |
| C1 | N5 | C4 | C6 | 179.4° | 179.9° |
| N5 | C1 | C1' | H9 | 17.2° | 175.1° |
| N5 | C1 | N2 | H14 | 179.8° | 179.8° |
| C3 | C4 | N5 | C6 | 178.7° | 179.7° |
| C3 | C4 | C6 | C7 | 13.2° | 180.0° |
| C3 | C4 | C6 | C11 | 167.3° | 0.3° |
| C4 | C3 | N2 | H14 | 179.4° | 179.9° |
| N5 | C4 | C6 | C7 | 165.3° | 0.3° |
| N5 | C4 | C6 | C11 | 14.3° | 180.0° |
| N5 | C4 | C3 | H15 | 179.2° | 179.8° |
| C4 | C6 | C7 | C11 | 179.5° | 179.7° |
| C4 | C6 | C7 | C8 | 179.0° | 180.0° |
| C4 | C6 | C11 | C10 | 178.6° | 179.8° |
| C6 | C4 | C3 | H15 | 0.5° | 0.1° |
| C4 | C6 | C7 | H17 | 1.0° | 0.1° |
| C4 | C6 | C11 | H21 | 1.4° | 0.0° |
| C6 | C7 | C8 | H17 | 180.0° | 179.9° |
| C7 | C6 | C11 | C10 | 1.0° | 0.6° |
| C6 | C7 | C8 | C9 | 0.6° | 0.1° |
| C6 | C7 | C8 | H18 | 179.5° | 180.0° |
| C7 | C6 | C11 | H21 | 179.0° | 179.7° |
| C11 | C6 | C7 | C8 | 0.5° | 0.3° |
| C6 | C11 | C10 | H21 | 180.0° | 179.7° |
| C6 | C11 | C10 | C9 | 1.4° | 0.5° |
| C11 | C6 | C7 | H17 | 179.5° | 179.7° |
| C6 | C11 | C10 | H20 | 178.6° | 179.7° |
| C7 | C8 | C9 | H18 | 180.0° | 180.0° |
| C7 | C8 | C9 | C10 | 1.0° | 0.0° |
| C7 | C8 | C9 | H19 | 179.0° | 180.0° |
| C11 | C10 | C9 | C8 | 1.4° | 0.3° |
| C11 | C10 | C9 | H20 | 180.0° | 179.7° |
| C11 | C10 | C9 | H19 | 178.6° | 179.7° |
| C8 | C9 | C10 | H19 | 180.0° | 180.0° |
| C9 | C8 | C7 | H17 | 179.4° | 180.0° |
| C8 | C9 | C10 | H20 | 178.6° | 180.0° |
| C10 | C9 | C8 | H18 | 179.0° | 180.0° |
| C9 | C10 | C11 | H21 | 178.6° | 179.7° |
| H1 | O6' | C6' | H2 | 59.6° | 60.0° |
| H1 | O6' | C6' | H3 | 59.6° | 60.0° |
| H2 | C6' | C5' | H4 | 49.2° | 175.1° |
| H3 | C6' | C5' | H4 | 69.9° | 65.0° |
| H4 | C5' | C4' | H5 | 173.9° | 177.7° |
| H5 | C4' | O4' | H6 | 60.9° | 60.1° |
| H5 | C4' | C3' | H7 | 171.3° | 177.2° |
| H7 | C3' | O3' | H8 | 62.1° | 60.3° |
| H7 | C3' | C2' | H10 | 175.1° | 177.2° |
| H9 | C1' | C2' | H10 | 179.7° | 177.7° |
| H10 | C2' | N2' | H11 | 60.6° | 60.1° |
| H10 | C2' | N2' | H12 | 59.4° | 175.9° |
| H14 | N2 | C3 | H15 | 0.6° | 0.1° |
| H17 | C7 | C8 | H18 | 0.5° | 0.1° |
| H18 | C8 | C9 | H19 | 1.0° | 0.0° |
| H19 | C9 | C10 | H20 | 1.4° | 0.0° |
| H20 | C10 | C11 | H21 | 1.4° | 0.0° |
